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188
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aaronmk
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# Dynamically-generated organisms maps
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genOrganisms = VegX-VegBIEN.organisms.csv
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all = $(genOrganisms) \
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$(subst .organisms.,.plots.,$(genOrganisms) $(wildcard VegX-*.organisms.csv))
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all: FORCE $(all)
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148
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aaronmk
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./join_all_vegbank
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./format_all_for_review
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150
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aaronmk
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FORCE:
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188
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aaronmk
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clean: FORCE
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rm $(foreach item,$(sort $(all)),$(wildcard $(item)))
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VegX-VegBIEN.organisms.csv: \
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VegX-VegBank.organisms.csv \
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VegBank-VegBIEN.organisms.csv
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191
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aaronmk
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../scripts/util/join_passthru $+|../scripts/util/sort 1 0 >$@
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188
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aaronmk
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chRoot = ../scripts/util/ch_root <$< >$@
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chRoot2PlotsLeftVegx =\
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env \
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left_in_root='/*s/individualOrganismObservation/*ID->/*s/plotObservation' \
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left_out_root='/*s/plotObservation' \
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$(chRoot)
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VegX-VegBank.plots.csv: VegX-VegBank.organisms.csv
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$(chRoot2PlotsVegxVegbank)
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chRoot2PlotsVegxVegbank =\
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env \
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right_in_root='/taxonObservation/*_ID/observation' \
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right_out_root='/observation' \
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$(chRoot2PlotsLeftVegx)
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VegX-VegBIEN.plots.csv: VegX-VegBIEN.organisms.csv
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$(chRoot2PlotsVegxVegbien)
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chRoot2PlotsVegxVegbien =\
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env \
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right_in_root='/taxonObservation/*_ID/plotevent' \
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right_out_root='/plotevent' \
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$(chRoot2PlotsLeftVegx)
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