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1
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all: FORCE VegX-VegBIEN.organisms.csv
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2
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$(MAKE) $(subst .organisms.,.plots.,$(shell echo VegX-*.organisms.csv))
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3
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./join_all_vegbank
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4
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./format_all_for_review
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5
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6
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FORCE:
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7
|
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8
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all = $(filter-out VegX-% VegBank-%,$(wildcard *-VegBank.*.csv)) \
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9
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VegX-*.plots.csv VegX-VegBIEN.organisms.csv
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10
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11
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clean: FORCE
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12
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$(RM) $(all)
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|
13
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|
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14
|
VegX-VegBIEN.organisms.csv: \
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15
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VegX-VegBank.organisms.csv \
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16
|
VegBank-VegBIEN.organisms.csv
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17
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../scripts/util/join_passthru $+|../scripts/util/sort 1 0 >$@
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18
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19
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chRoot = ../scripts/util/ch_root <$< >$@
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20
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|
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21
|
chRoot2PlotsLeftVegx =\
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22
|
env \
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23
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left_in_root='/*s/individualOrganismObservation/*ID->/*s/plotObservation' \
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24
|
left_out_root='/*s/plotObservation' \
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25
|
$(chRoot)
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|
26
|
|
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27
|
VegX-VegBank.plots.csv: VegX-VegBank.organisms.csv
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28
|
$(chRoot2PlotsVegxVegbank)
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|
29
|
chRoot2PlotsVegxVegbank =\
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|
30
|
env \
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31
|
right_in_root='/taxonObservation/*_ID/observation' \
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32
|
right_out_root='/observation' \
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33
|
$(chRoot2PlotsLeftVegx)
|
|
34
|
|
|
35
|
VegX-VegBIEN.plots.csv: VegX-VegBIEN.organisms.csv
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|
36
|
$(chRoot2PlotsVegxVegbien)
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|
37
|
chRoot2PlotsVegxVegbien =\
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|
38
|
env \
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|
39
|
right_in_root='/taxonObservation/*_ID/plotevent' \
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40
|
right_out_root='/plotevent' \
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41
|
$(chRoot2PlotsLeftVegx)
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