1 |
783
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aaronmk
|
##### Configuration
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2 |
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3 |
1921
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aaronmk
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# Command line
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4 |
1983
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aaronmk
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debug ?=
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5 |
1190
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aaronmk
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log ?= $(if $(test),,1)
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6 |
1257
|
aaronmk
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profile ?=
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7 |
1983
|
aaronmk
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quiet ?=
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8 |
1620
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aaronmk
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reverify ?= 1
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9 |
1990
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aaronmk
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use_staged ?= $(by_col)
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10 |
1921
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aaronmk
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11 |
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# Makefile
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12 |
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tablesSort ?= plots organisms stems specimens
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13 |
1386
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aaronmk
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exts ?= csv tsv txt xml
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14 |
783
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aaronmk
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test_n ?= 2
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15 |
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16 |
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##### Vars/functions
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17 |
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18 |
640
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aaronmk
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selfDir_uZPPqC := $(dir $(lastword $(MAKEFILE_LIST)))
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19 |
250
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aaronmk
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20 |
1821
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aaronmk
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# Paths
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21 |
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datasrc := $(notdir $(realpath .))
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22 |
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root := $(selfDir_uZPPqC)..
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23 |
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bin := $(root)/bin
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24 |
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mappings := $(root)/mappings
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25 |
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368
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aaronmk
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# Make
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27 |
640
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aaronmk
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SHELL := /bin/bash
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28 |
1509
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aaronmk
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selfMake = $(MAKE) --makefile=../input.Makefile
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29 |
1821
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aaronmk
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subMake = $(MAKE) $(@:$(root)/%=%) --directory=$(root)
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30 |
404
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aaronmk
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+_ = $(+:_%=)
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31 |
368
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aaronmk
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addBeforeExt = $(basename $(2))$(1)$(suffix $(2))
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32 |
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1742
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aaronmk
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# OS
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34 |
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os := $(shell uname)
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forOs = $(patsubst %,%-$(filter Linux Darwin,$(os)),$(1))
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# Formatting
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SED = sed -$(if $(filter Darwin,$(os)),E,r)
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39 |
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790
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aaronmk
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# System
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date = $(shell date +"%Y-%m-%d-%H-%M-%S")
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640
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aaronmk
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# Terminal
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44 |
1184
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aaronmk
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termCols := $(shell tput cols)
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45 |
640
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aaronmk
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esc := '['
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46 |
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reset := $(esc)'0m'
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47 |
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emph := $(esc)'7m '
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endEmph := ' '$(reset)
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49 |
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50 |
368
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aaronmk
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# Commands
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51 |
1245
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aaronmk
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MKDIR = mkdir -p
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52 |
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mkdir = $(MKDIR) $(@D)
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53 |
395
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aaronmk
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CP = cp -p
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54 |
1184
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aaronmk
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diff = diff --unified=2
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55 |
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diffVerbose = $(if $(verbose),diff --side-by-side --left-column\
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--width=$(termCols),$(diff))
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57 |
368
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aaronmk
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58 |
1918
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aaronmk
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# BIEN commands
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59 |
1524
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aaronmk
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selfMap = $(bin)/cols 0 0
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60 |
1081
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aaronmk
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psqlOpts := --set ON_ERROR_STOP=1 --quiet
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61 |
1289
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aaronmk
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psqlAsBien := $(bin)/psql_vegbien $(psqlOpts)
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62 |
353
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aaronmk
|
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63 |
1594
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aaronmk
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# SVN
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64 |
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addDir = $(if $(wildcard $(1)/),svn add --depth=empty $(1),svn mkdir $(1))
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65 |
1771
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aaronmk
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setSvnIgnore = svn propset svn:ignore $(2) $(1)
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66 |
1594
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aaronmk
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define addDirWithIgnore
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$(addDir)
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68 |
1771
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aaronmk
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$(setSvnIgnore)
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69 |
1594
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aaronmk
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endef
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70 |
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71 |
783
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aaronmk
|
##### General targets
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72 |
250
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aaronmk
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73 |
418
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aaronmk
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all: _always maps ;
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74 |
247
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aaronmk
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75 |
1260
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aaronmk
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.SUFFIXES: # turn off built-in suffix rules
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.SECONDARY: # don't automatically delete intermediate files
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77 |
1354
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aaronmk
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.DELETE_ON_ERROR: # delete target if recipe fails
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78 |
247
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aaronmk
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79 |
383
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aaronmk
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_always:
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.PHONY: _always
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81 |
250
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aaronmk
|
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82 |
383
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aaronmk
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clean: _always
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83 |
256
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aaronmk
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$(RM) $(all)
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84 |
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85 |
1742
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aaronmk
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remake: _always clean
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86 |
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+$(selfMake)
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# re-run make so that cache of existing files is reset
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88 |
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89 |
1627
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aaronmk
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make_script = ./$< >$@
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90 |
368
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aaronmk
|
|
91 |
1604
|
aaronmk
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%/: % _always ;
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92 |
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93 |
1627
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aaronmk
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# Must come before `%: %.make` to override it
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94 |
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src/%: src/%.make _always
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95 |
1663
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aaronmk
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(set -x; $(make_script)) 2>>$<.log
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96 |
1627
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aaronmk
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.PRECIOUS: src/% # save partial outputs of aborted src make scripts
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97 |
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%: %.make _always
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99 |
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$(make_script)
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100 |
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101 |
783
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aaronmk
|
##### SVN
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102 |
250
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aaronmk
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|
103 |
1594
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aaronmk
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add: _always
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104 |
1771
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aaronmk
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$(call setSvnIgnore,.,$$'')
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105 |
1594
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aaronmk
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$(call addDirWithIgnore,src,$$'*')
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106 |
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$(call addDirWithIgnore,maps,$$'.~*')
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107 |
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$(call addDirWithIgnore,import,$$'*')
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108 |
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$(call addDirWithIgnore,test,$$'*.out\n*.xml')
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109 |
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$(call addDirWithIgnore,verify,$$'*.out')
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110 |
766
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aaronmk
|
|
111 |
1969
|
aaronmk
|
##### Existing maps discovery
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112 |
1955
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aaronmk
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|
113 |
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inputFiles := $(wildcard $(exts:%=src/*.%))
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114 |
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ifeq ($(inputFiles),)
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115 |
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dbExport := $(firstword $(wildcard src/db.*.sql))
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116 |
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endif
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117 |
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118 |
1289
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aaronmk
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srcMap := maps/src.%.csv
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119 |
1139
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aaronmk
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fullViaMap := maps/%.full.csv
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120 |
1289
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aaronmk
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directMap := maps/VegBIEN.%.csv
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121 |
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allViaMaps := $(filter-out $(srcMap) $(fullViaMap) $(directMap),\
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122 |
1139
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aaronmk
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$(wildcard maps/*.csv))
|
123 |
728
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aaronmk
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via := $(firstword $(sort $(basename $(basename $(notdir $(allViaMaps))))))
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124 |
783
|
aaronmk
|
|
125 |
775
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aaronmk
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coreMap := $(mappings)/$(via)-VegBIEN.%.csv
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126 |
1524
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aaronmk
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coreSelfMap := $(mappings)/$(via).self.%.csv
|
127 |
783
|
aaronmk
|
|
128 |
749
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aaronmk
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viaMaps := $(wildcard $(tablesSort:%=maps/$(via).%.csv))
|
129 |
1139
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aaronmk
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viaMaps += $(filter-out $(viaMaps) $(fullViaMap),$(wildcard maps/$(via).*.csv))
|
130 |
783
|
aaronmk
|
|
131 |
728
|
aaronmk
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autogenMaps := $(subst $(via).,VegBIEN.,$(viaMaps))
|
132 |
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directMaps := $(autogenMaps) $(filter-out $(autogenMaps),\
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133 |
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$(wildcard maps/VegBIEN.*.csv))
|
134 |
772
|
aaronmk
|
tables := $(directMaps:maps/VegBIEN.%.csv=%)
|
135 |
728
|
aaronmk
|
|
136 |
1969
|
aaronmk
|
##### Sources
|
137 |
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138 |
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srcs = $(shell $(bin)/sort_filenames $(wildcard $(exts:%=src/*.$*.%)))
|
139 |
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isCsv = $(if $(srcs),$(if $(filter %.xml,$(srcs)),,1))
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140 |
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# true if $(srcs) non-empty and contains no *.xml
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141 |
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catSrcs = $(bin)/cat$(if $(isCsv),_csv) $(srcs)
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142 |
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withCatSrcs = $(catSrcs:$(bin)/%=$(bin)/with_%) --
|
143 |
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|
144 |
1986
|
aaronmk
|
# Usage: `make {--silent|-s} inputs/<datasrc>/cat` (don't echo make commands)
|
145 |
1969
|
aaronmk
|
cat: $(addprefix cat-,$(tables)) _always ;
|
146 |
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|
147 |
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cat-%: _always
|
148 |
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$(catSrcs)
|
149 |
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|
150 |
1921
|
aaronmk
|
##### Installation
|
151 |
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|
152 |
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install: _always src/install import/install ;
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153 |
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154 |
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uninstall: _always import/uninstall src/uninstall ;
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155 |
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156 |
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reinstall: _always uninstall install ;
|
157 |
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|
158 |
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##### Staging tables
|
159 |
|
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|
160 |
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import/install: _always import/schema $(addprefix import/install-,$(tables)) ;
|
161 |
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|
162 |
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import/uninstall: _always import/rm_schema ;
|
163 |
|
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# rm_schema will also drop all staging tables
|
164 |
|
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|
165 |
|
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import/schema: _always
|
166 |
|
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-echo 'CREATE SCHEMA "$(datasrc)";'|$(psqlAsBien)
|
167 |
|
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# ignore errors if schema exists
|
168 |
|
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|
169 |
|
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import/rm_schema: _always
|
170 |
|
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echo 'DROP SCHEMA IF EXISTS "$(datasrc)" CASCADE;'|$(psqlAsBien)
|
171 |
|
|
|
172 |
|
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import/install-%: _always
|
173 |
1955
|
aaronmk
|
$(if $(isCsv),$(import_install_))
|
174 |
|
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import_install_ = (prefix=; . $(bin)/vegbien_dest; "time" env schema=$(datasrc)\
|
175 |
1971
|
aaronmk
|
table=$* $(bin)/csv2db $(catSrcs) $(if $(quiet),&>,2>&1|tee )import/install.log)
|
176 |
1921
|
aaronmk
|
|
177 |
1777
|
aaronmk
|
##### Maps building
|
178 |
|
|
|
179 |
1789
|
aaronmk
|
# Maps to (try to) build are added to one of these
|
180 |
1779
|
aaronmk
|
maps :=
|
181 |
1789
|
aaronmk
|
createOnlyMaps :=
|
182 |
1779
|
aaronmk
|
|
183 |
1775
|
aaronmk
|
srcMaps := $(wildcard maps/src.*.csv)
|
184 |
1289
|
aaronmk
|
|
185 |
1931
|
aaronmk
|
mkSrcMap = $(catSrcs)|env datasrc=$(datasrc) $(bin)/src_map >$@
|
186 |
1779
|
aaronmk
|
|
187 |
|
|
# Autogen src maps with known table names
|
188 |
|
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maps/src.%.csv: # no prereqs so only built if doesn't exist
|
189 |
1955
|
aaronmk
|
$(if $(isCsv),$(mkSrcMap))
|
190 |
1779
|
aaronmk
|
# only build if CSV srcs exist for that table name
|
191 |
|
|
# Try all table names
|
192 |
1789
|
aaronmk
|
createOnlyMaps += $(tablesSort:%=maps/src.%.csv)
|
193 |
1779
|
aaronmk
|
|
194 |
1273
|
aaronmk
|
# Must come before $(root)/% to override it
|
195 |
1524
|
aaronmk
|
$(coreSelfMap): _always
|
196 |
1273
|
aaronmk
|
-+$(subMake)
|
197 |
1524
|
aaronmk
|
# ignore errors if $(coreSelfMap) does not exist
|
198 |
1273
|
aaronmk
|
|
199 |
1509
|
aaronmk
|
# Via maps cleanup
|
200 |
|
|
ifneq ($(filter maps/.%.last_cleanup,$(MAKECMDGOALS)),)
|
201 |
1787
|
aaronmk
|
maps/.$(via).%.csv.last_cleanup: maps/$(via).%.csv $(coreMap)
|
202 |
1790
|
aaronmk
|
$(bin)/in_place $< env ignore=1 $(bin)/subtract $(word 2,$+) 0 1
|
203 |
1509
|
aaronmk
|
touch $@
|
204 |
|
|
else
|
205 |
|
|
$(viaMaps): _always
|
206 |
|
|
$(selfMake) $(@:maps/%=maps/.%.last_cleanup)
|
207 |
|
|
endif
|
208 |
1273
|
aaronmk
|
|
209 |
1526
|
aaronmk
|
joinSrcMap = $(if $(wildcard maps/src.$*.csv),$(bin)/in_place $@\
|
210 |
|
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$(bin)/intersect maps/src.$*.csv 0)
|
211 |
|
|
|
212 |
1273
|
aaronmk
|
makeFullCsv = $(if $(shell test -e $(word 2,$+) && echo t),\
|
213 |
1817
|
aaronmk
|
env ignore=1 $(bin)/union <$+|,<$< )$(bin)/sort_map >$@
|
214 |
1524
|
aaronmk
|
# can't use $(wildcard) because it won't recheck file after $(coreSelfMap) runs
|
215 |
1273
|
aaronmk
|
|
216 |
1524
|
aaronmk
|
maps/$(via).%.full.csv: maps/$(via).%.csv $(coreSelfMap)
|
217 |
1273
|
aaronmk
|
$(makeFullCsv)
|
218 |
1526
|
aaronmk
|
$(joinSrcMap)
|
219 |
1139
|
aaronmk
|
maps += $(patsubst maps/%.csv,maps/%.full.csv,$(viaMaps))
|
220 |
|
|
|
221 |
1530
|
aaronmk
|
maps/VegBIEN.%.csv: maps/$(via).%.full.csv $(coreMap)
|
222 |
|
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$(bin)/join <$+|$(bin)/sort_map >$@
|
223 |
|
|
maps += $(autogenMaps)
|
224 |
|
|
|
225 |
1789
|
aaronmk
|
maps: $(createOnlyMaps) $(maps) _always ;
|
226 |
1139
|
aaronmk
|
|
227 |
|
|
all += $(maps)
|
228 |
|
|
|
229 |
1742
|
aaronmk
|
##### Maps validation
|
230 |
|
|
|
231 |
|
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missing_mappings: _always missing_join_mappings missing_input_mappings ;
|
232 |
|
|
|
233 |
|
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missing_%_mappings: _always # stem is one of join|input
|
234 |
|
|
@echo $(emph)"Missing $* mappings:"$(endEmph)
|
235 |
|
|
@+$(selfMake) remake 2>&1\
|
236 |
1800
|
aaronmk
|
|$(SED) -n 's/^.*No.* $* mapping for ([0-9A-Za-z_-]+).*$$/\1/p'\
|
237 |
1742
|
aaronmk
|
$(if $(filter join,$*),|$(bin)/ucase_first 0)|sort|uniq
|
238 |
|
|
|
239 |
1509
|
aaronmk
|
##### External dependencies
|
240 |
|
|
|
241 |
|
|
$(root)/%: _always
|
242 |
|
|
+$(subMake)
|
243 |
1628
|
aaronmk
|
.PRECIOUS: $(root)/% # let ext. dir's Makefile decide whether to delete on error
|
244 |
1509
|
aaronmk
|
|
245 |
783
|
aaronmk
|
##### Mapping
|
246 |
368
|
aaronmk
|
|
247 |
775
|
aaronmk
|
+maps = $(filter maps/% $(mappings)/%,$(+_))
|
248 |
1451
|
aaronmk
|
<in = $(firstword $(filter-out $(+maps),$(+_)))
|
249 |
|
|
map = $(if $(<in),<$(<in),\
|
250 |
1983
|
aaronmk
|
$(if $(use_staged),env in_database=vegbien in_schema=$(datasrc) in_table=$*,\
|
251 |
1777
|
aaronmk
|
$(if $(srcs),$(withCatSrcs),\
|
252 |
1451
|
aaronmk
|
$(if $(mapEnv),env $(mapEnv),\
|
253 |
1983
|
aaronmk
|
$(error No input file src/*.$*.{$(exts)})))))\
|
254 |
1451
|
aaronmk
|
$(root)/map $(+maps)
|
255 |
772
|
aaronmk
|
map2db = env out_database=vegbien $(map)
|
256 |
368
|
aaronmk
|
|
257 |
783
|
aaronmk
|
##### Import to VegBIEN
|
258 |
772
|
aaronmk
|
|
259 |
1378
|
aaronmk
|
ifneq ($(dbExport)$(inputFiles),)
|
260 |
772
|
aaronmk
|
|
261 |
1853
|
aaronmk
|
profileTest = $(if $(profile),$(if $(test),1))
|
262 |
|
|
profileOnly = -env profile_to=/dev/fd/3 $(map2db) 3>&1 1>&2|\
|
263 |
|
|
$(bin)/profile_stats /dev/fd/0
|
264 |
|
|
|
265 |
1594
|
aaronmk
|
log_ = import/$*$(if $(n),.n=$(n),).$(date).log
|
266 |
1190
|
aaronmk
|
trace = $(log_:.log=.trace)
|
267 |
1853
|
aaronmk
|
import = -$(if $(profileTest),$(profileOnly),(set -x; "time" env commit=1\
|
268 |
1190
|
aaronmk
|
$(if $(profile),profile_to=$(trace)) $(map2db)) $(if $(log),\
|
269 |
1853
|
aaronmk
|
$(if $(n),,>>$(log_))) 2>&1$(if $(log),$(if $(n),|tee -a $(log_))))
|
270 |
1088
|
aaronmk
|
# don't abort on import errors, which often relate to invalid input data
|
271 |
624
|
aaronmk
|
|
272 |
1193
|
aaronmk
|
import: $(addprefix import-,$(tables)) _always ;
|
273 |
718
|
aaronmk
|
|
274 |
|
|
import-%: maps/VegBIEN.%.csv _always
|
275 |
|
|
$(import)
|
276 |
772
|
aaronmk
|
# default:
|
277 |
|
|
import-%: _always ;
|
278 |
718
|
aaronmk
|
|
279 |
772
|
aaronmk
|
else
|
280 |
|
|
import: _always ;
|
281 |
|
|
endif
|
282 |
|
|
|
283 |
790
|
aaronmk
|
##### Log files from import
|
284 |
|
|
|
285 |
1594
|
aaronmk
|
logs := $(wildcard import/*.log import/*.trace)
|
286 |
339
|
aaronmk
|
|
287 |
383
|
aaronmk
|
rm_logs: _always
|
288 |
339
|
aaronmk
|
$(RM) $(logs)
|
289 |
|
|
|
290 |
783
|
aaronmk
|
##### Verification of import
|
291 |
264
|
aaronmk
|
|
292 |
1194
|
aaronmk
|
verify: $(addprefix verify-,$(tables)) _always ;
|
293 |
|
|
|
294 |
1199
|
aaronmk
|
verify-%: verify/%.ref verify/%.out _always
|
295 |
1184
|
aaronmk
|
-$(diffVerbose) $(+_)
|
296 |
1088
|
aaronmk
|
# don't abort on verification errors, which are expected during development
|
297 |
1194
|
aaronmk
|
# default:
|
298 |
1199
|
aaronmk
|
verify-%: verify/%.out _always
|
299 |
1200
|
aaronmk
|
$(if $(shell test -e $< && echo t),cat $<)
|
300 |
1199
|
aaronmk
|
# don't run if verify/%.out's default do-nothing action was used
|
301 |
1200
|
aaronmk
|
# can't use $(wildcard) because it won't recheck file after verify/%.out is run
|
302 |
368
|
aaronmk
|
|
303 |
1620
|
aaronmk
|
verify = $(if $(reverify),"time" $(psqlAsBien) --set=datasource="'$(datasrc)'"\
|
304 |
|
|
--no-align --field-separator=$$'\t' --pset=footer=off --pset=null=NULL <$< >$@)
|
305 |
514
|
aaronmk
|
|
306 |
1199
|
aaronmk
|
verify/%.out: $(mappings)/verify.%.sql _always
|
307 |
1192
|
aaronmk
|
$(verify)
|
308 |
1194
|
aaronmk
|
# default:
|
309 |
1199
|
aaronmk
|
verify/%.out: _always ;
|
310 |
369
|
aaronmk
|
|
311 |
1199
|
aaronmk
|
all += $(wildcard verify/*.out)
|
312 |
1192
|
aaronmk
|
|
313 |
1378
|
aaronmk
|
ifneq ($(dbExport),)
|
314 |
1082
|
aaronmk
|
%.ref: %.ref.sql
|
315 |
|
|
$(dbAsBien) $(db) <$< >$@
|
316 |
|
|
endif
|
317 |
|
|
|
318 |
1667
|
aaronmk
|
##### Editing import
|
319 |
|
|
|
320 |
|
|
import/rotate: _always
|
321 |
1668
|
aaronmk
|
echo "UPDATE party SET organizationname = organizationname||'.$(date)'\
|
322 |
1854
|
aaronmk
|
WHERE organizationname = '$(datasrc)';"|$(psqlAsBien)
|
323 |
1667
|
aaronmk
|
|
324 |
|
|
import/rm: _always
|
325 |
1854
|
aaronmk
|
echo "DELETE FROM party WHERE organizationname = '$(datasrc)';"|\
|
326 |
|
|
$(psqlAsBien)
|
327 |
1667
|
aaronmk
|
|
328 |
783
|
aaronmk
|
##### Testing
|
329 |
368
|
aaronmk
|
|
330 |
1986
|
aaronmk
|
testRefOutput = $(subst .2-step,,$(subst .staging,,$(1)))
|
331 |
|
|
testRef = $(testRefOutput).ref
|
332 |
|
|
hasOwnRef = $(filter $@,$(call testRefOutput,$@))
|
333 |
|
|
# filter returns non-empty if they are equal
|
334 |
630
|
aaronmk
|
|
335 |
897
|
aaronmk
|
define runTest
|
336 |
776
|
aaronmk
|
@echo "Testing $(abspath $@)..."
|
337 |
991
|
aaronmk
|
>$@ env test=1 n=$(test_n) $(1)
|
338 |
1184
|
aaronmk
|
@(set -x; $(diff) $(call testRef,$@) $@) 2>&1 || { e=$$?;\
|
339 |
780
|
aaronmk
|
$(if $(wildcard $(call testRef,$@)),,cat $@;)\
|
340 |
777
|
aaronmk
|
$(if $(hasOwnRef),\
|
341 |
|
|
echo $(emph)"To accept new test output:"$(endEmph);\
|
342 |
|
|
echo "$(MAKE) $@-ok --directory=$(realpath .) --makefile=../input.Makefile";\
|
343 |
|
|
,\
|
344 |
|
|
echo $(emph)"Note: The preceding failed test is compared to another test's\
|
345 |
|
|
output"$(endEmph);\
|
346 |
|
|
echo $(emph)"When it fails, this always indicates a bug"$(endEmph);\
|
347 |
|
|
)\
|
348 |
652
|
aaronmk
|
exit $$e;}
|
349 |
628
|
aaronmk
|
endef
|
350 |
|
|
|
351 |
897
|
aaronmk
|
test2File = $(call runTest,$(map))
|
352 |
1986
|
aaronmk
|
test2Db = $(call runTest,$(map2db))
|
353 |
775
|
aaronmk
|
|
354 |
876
|
aaronmk
|
tests :=
|
355 |
|
|
|
356 |
1139
|
aaronmk
|
test/$(via).%.xml: maps/$(via).%.full.csv _always
|
357 |
775
|
aaronmk
|
$(test2File)
|
358 |
876
|
aaronmk
|
tests += test/$(via).%.xml
|
359 |
629
|
aaronmk
|
|
360 |
876
|
aaronmk
|
test/VegBIEN.%.xml: maps/VegBIEN.%.csv _always
|
361 |
775
|
aaronmk
|
$(test2File)
|
362 |
876
|
aaronmk
|
tests += test/VegBIEN.%.xml
|
363 |
628
|
aaronmk
|
|
364 |
884
|
aaronmk
|
test/VegBIEN.%.2-step.xml: test/$(via).%.xml $(coreMap) _always
|
365 |
775
|
aaronmk
|
-$(test2File)
|
366 |
722
|
aaronmk
|
# Don't abort tester if only 2-step test fails, as it's often finicky
|
367 |
876
|
aaronmk
|
tests += test/VegBIEN.%.2-step.xml
|
368 |
630
|
aaronmk
|
|
369 |
876
|
aaronmk
|
test/import.%.out: maps/VegBIEN.%.csv _always
|
370 |
1986
|
aaronmk
|
$(test2Db)
|
371 |
876
|
aaronmk
|
tests += test/import.%.out
|
372 |
627
|
aaronmk
|
|
373 |
1987
|
aaronmk
|
testStaged2Db = $(foreach use_staged,1,$(test2Db))
|
374 |
|
|
# run with use_staged=1
|
375 |
1986
|
aaronmk
|
|
376 |
|
|
# Requires staging tables. To create them, run `make inputs/<datasrc>/install`.
|
377 |
|
|
test/import.%.staging.out: maps/VegBIEN.%.csv _always
|
378 |
1988
|
aaronmk
|
-$(if $(isCsv),$(testStaged2Db),cp -p $(@:.staging.out=.out) $@)
|
379 |
|
|
# Don't abort tester if only staging test fails, in case staging table missing
|
380 |
|
|
# Non-flat-file inputs fall back to mimicking a successful test
|
381 |
1986
|
aaronmk
|
tests += test/import.%.staging.out
|
382 |
|
|
|
383 |
876
|
aaronmk
|
testOutputs := $(foreach test,$(tests),$(tables:%=$(test)))
|
384 |
724
|
aaronmk
|
|
385 |
1361
|
aaronmk
|
.PRECIOUS: $(testOutputs) # save outputs of failed tests so they can be accepted
|
386 |
|
|
|
387 |
876
|
aaronmk
|
test: _always $(testOutputs) ;
|
388 |
|
|
|
389 |
1987
|
aaronmk
|
all += $(filter-out %.ref,$(wildcard test/*))
|
390 |
876
|
aaronmk
|
|
391 |
634
|
aaronmk
|
# Accepts a test output: make <test_output_path>-ok
|
392 |
626
|
aaronmk
|
%-ok: _always
|
393 |
630
|
aaronmk
|
$(CP) $* $(call testRef,$*)
|
394 |
502
|
aaronmk
|
|
395 |
783
|
aaronmk
|
##### Input-type-specific
|
396 |
368
|
aaronmk
|
|
397 |
1917
|
aaronmk
|
# Each input type needs var $(mapEnv) and targets src/install, src/uninstall
|
398 |
624
|
aaronmk
|
|
399 |
1379
|
aaronmk
|
#### DB export
|
400 |
|
|
|
401 |
1378
|
aaronmk
|
ifneq ($(dbExport),)
|
402 |
256
|
aaronmk
|
|
403 |
1378
|
aaronmk
|
dbEngineExt := $(subst .,,$(suffix $(basename $(notdir $(dbExport)))))
|
404 |
1196
|
aaronmk
|
db := $(datasrc)
|
405 |
622
|
aaronmk
|
|
406 |
1379
|
aaronmk
|
### Installation
|
407 |
256
|
aaronmk
|
|
408 |
1917
|
aaronmk
|
src/install: _always db ;
|
409 |
339
|
aaronmk
|
|
410 |
1917
|
aaronmk
|
src/uninstall: _always rm_db ;
|
411 |
368
|
aaronmk
|
|
412 |
1379
|
aaronmk
|
### DB-engine-specific
|
413 |
621
|
aaronmk
|
|
414 |
624
|
aaronmk
|
# Each DB engine needs vars $(dbEngine), $(dbAsBien) and targets db, rm_db
|
415 |
256
|
aaronmk
|
|
416 |
622
|
aaronmk
|
ifeq ($(dbEngineExt),my)
|
417 |
621
|
aaronmk
|
|
418 |
622
|
aaronmk
|
dbEngine := MySQL
|
419 |
|
|
|
420 |
621
|
aaronmk
|
bienPassword := $(shell cat $(root)/config/bien_password)
|
421 |
|
|
mysqlAs = mysql --user=$(1) --password='$(bienPassword)'
|
422 |
|
|
mysqlAsRoot := $(call mysqlAs,root)
|
423 |
|
|
dbAsBien := $(call mysqlAs,bien)
|
424 |
|
|
|
425 |
1097
|
aaronmk
|
dbExists = $(shell echo "SHOW DATABASES LIKE '$(db)';"|$(mysqlAsRoot))
|
426 |
|
|
|
427 |
|
|
define createDb
|
428 |
1098
|
aaronmk
|
echo "CREATE DATABASE $(db) DEFAULT CHARACTER SET latin1;"|$(mysqlAsRoot)
|
429 |
1097
|
aaronmk
|
-$(mysqlAsRoot) --database=$(db) <$<
|
430 |
|
|
endef
|
431 |
|
|
# ignore errors in db import so that GRANT will still be run
|
432 |
|
|
|
433 |
1378
|
aaronmk
|
db: $(dbExport) _always
|
434 |
1097
|
aaronmk
|
$(if $(dbExists),,$(createDb))
|
435 |
368
|
aaronmk
|
echo "GRANT SELECT ON $(db).* TO 'bien'@'localhost';"|$(mysqlAsRoot)
|
436 |
250
|
aaronmk
|
|
437 |
383
|
aaronmk
|
rm_db: _always
|
438 |
368
|
aaronmk
|
-echo "REVOKE ALL ON $(db).* FROM 'bien'@'localhost';"|$(mysqlAsRoot)
|
439 |
|
|
echo "DROP DATABASE IF EXISTS $(db);"|$(mysqlAsRoot)
|
440 |
365
|
aaronmk
|
# ignore errors if grant not defined
|
441 |
250
|
aaronmk
|
|
442 |
1379
|
aaronmk
|
## Unrecognized DB engine
|
443 |
368
|
aaronmk
|
|
444 |
|
|
else
|
445 |
1378
|
aaronmk
|
$(error The DB filename $(dbExport) must be db.my.sql)
|
446 |
368
|
aaronmk
|
endif
|
447 |
|
|
|
448 |
1379
|
aaronmk
|
### Other input types
|
449 |
622
|
aaronmk
|
|
450 |
1379
|
aaronmk
|
else
|
451 |
624
|
aaronmk
|
|
452 |
1917
|
aaronmk
|
src/install: _always ;
|
453 |
|
|
src/uninstall: _always ;
|
454 |
1379
|
aaronmk
|
|
455 |
256
|
aaronmk
|
endif
|
456 |
1379
|
aaronmk
|
|
457 |
|
|
#### DB connection info
|
458 |
|
|
|
459 |
|
|
ifneq ($(dbEngine),)
|
460 |
|
|
# Must come after dbEngine is set
|
461 |
|
|
mapEnv := in_engine=$(dbEngine) in_database=$(db)
|
462 |
|
|
endif
|