| 1 |
1516
|
aaronmk
|
UNCC[DwC],VegBIEN:/specimenreplicate,Comments,Order
|
| 2 |
|
|
county,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,66
|
| 3 |
|
|
state,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,65
|
| 4 |
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|
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,63
|
| 5 |
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locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/1,,68
|
| 6 |
|
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habitat,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
|
| 7 |
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collday,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,44
|
| 8 |
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collmonth,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,44
|
| 9 |
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collyear,"/*_id/taxonoccurrence/*_id/locationevent/{obsstartdate/_*/date/_dateRangeStart,obsenddate/_*/date/_dateRangeEnd}/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,44
|
| 10 |
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SciName,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",134
|
| 11 |
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|
authors,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
|
| 12 |
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|
infraname,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,150
|
| 13 |
|
|
species,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,149
|
| 14 |
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|
genus,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,147
|
| 15 |
|
|
family,"/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,146
|
| 16 |
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collector,/*_id/taxonoccurrence/verbatimcollectorname/_merge/1,,23
|
| 17 |
|
|
collector1,/*_id/taxonoccurrence/verbatimcollectorname/_merge/2,,23
|
| 18 |
|
|
collector2,/*_id/taxonoccurrence/verbatimcollectorname/_merge/3,,23
|
| 19 |
|
|
collector3,/*_id/taxonoccurrence/verbatimcollectorname/_merge/4,,23
|
| 20 |
1540
|
aaronmk
|
cultivated,"/*_id/taxonoccurrence/{growthform/_map:[./{tree,shrub,liana,vine,herb,hemiepiphyte,epiphyte,grass,forb,moss,lichen,fungus,""floating aquatic"",""submerged aquatic""}=*,*=],iscultivated/_map:[cultivated=t,wild=f,*=],isnative/_map:[native=t,exotic=f,*=]}/value/_map:[Y=cultivated,N=wild,*=]/value",Ignore other values,30
|
| 21 |
1516
|
aaronmk
|
herbarium,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
|
| 22 |
|
|
comment1,/description/_merge/1/_merge/1,,
|
| 23 |
|
|
comment2,/description/_merge/1/_merge/2,,
|
| 24 |
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comment3,/description/_merge/1/_merge/3,,
|
| 25 |
|
|
comment4,/description/_merge/1/_merge/4,,
|
| 26 |
|
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campus,"/description/_merge/1/_merge/5/_label[label=""campus""]/value",,
|
| 27 |
|
|
loanto,"/description/_merge/1/_merge/6/_label[label=""loaned to""]/value",,
|
| 28 |
|
|
inorout,"/description/_merge/1/_merge/7/_label[label=""in or out""]/value",,
|
| 29 |
|
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accession,":[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel,*_id/taxonoccurrence]/sourceaccessioncode","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
|
| 30 |
2028
|
aaronmk
|
collectno,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1/_alt/1,,22
|
| 31 |
1516
|
aaronmk
|
filler,,"Where used, same as family"
|
| 32 |
1801
|
aaronmk
|
flower,,"** No non-empty join mapping for reproductiveCondition/_map:[A=*,I=*,M=*]/value ** Main values are A, I, and M. What do they mean?"
|
| 33 |
|
|
fruit,,"** No non-empty join mapping for reproductiveCondition/_map:[A=*,I=*,M=*]/value ** Main values are A, I, and M. What do they mean?"
|
| 34 |
|
|
infrarank,,** No non-empty join mapping for taxonRank/_alt/2 **
|
| 35 |
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|
leaves,,"** No non-empty join mapping for reproductiveCondition/_map:[A=*,I=*,M=*]/value ** Main values are A, I, and M. What do they mean?"
|
| 36 |
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|
root,,"** No non-empty join mapping for reproductiveCondition/_map:[A=*,I=*,M=*]/value ** Main values are A, I, and M. What do they mean?"
|
| 37 |
|
|
sheetno,,** No non-empty join mapping for associatedMedia ** ?
|
| 38 |
|
|
usdaRank,,** No non-empty join mapping for taxonRank/_alt/1 **
|
