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1
# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
26
    else: return repr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+str(name), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self,
45
            'for name: '+str(name)+'; value: '+strings.ustr(value), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ExceptionWithColumns(DbException):
50
    def __init__(self, cols, cause=None):
51
        DbException.__init__(self, 'for columns: '+(', '.join(cols)), cause)
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        self.cols = cols
53

    
54
class NameException(DbException): pass
55

    
56
class DuplicateKeyException(ExceptionWithColumns): pass
57

    
58
class NullValueException(ExceptionWithColumns): pass
59

    
60
class FunctionValueException(ExceptionWithNameValue): pass
61

    
62
class DuplicateTableException(ExceptionWithName): pass
63

    
64
class DuplicateFunctionException(ExceptionWithName): pass
65

    
66
class EmptyRowException(DbException): pass
67

    
68
##### Warnings
69

    
70
class DbWarning(UserWarning): pass
71

    
72
##### Result retrieval
73

    
74
def col_names(cur): return (col[0] for col in cur.description)
75

    
76
def rows(cur): return iter(lambda: cur.fetchone(), None)
77

    
78
def consume_rows(cur):
79
    '''Used to fetch all rows so result will be cached'''
80
    iters.consume_iter(rows(cur))
81

    
82
def next_row(cur): return rows(cur).next()
83

    
84
def row(cur):
85
    row_ = next_row(cur)
86
    consume_rows(cur)
87
    return row_
88

    
89
def next_value(cur): return next_row(cur)[0]
90

    
91
def value(cur): return row(cur)[0]
92

    
93
def values(cur): return iters.func_iter(lambda: next_value(cur))
94

    
95
def value_or_none(cur):
96
    try: return value(cur)
97
    except StopIteration: return None
98

    
99
##### Input validation
100

    
101
def clean_name(name): return re.sub(r'\W', r'', name).lower()
102

    
103
def check_name(name):
104
    if re.search(r'\W', name) != None: raise NameException('Name "'+name
105
        +'" may contain only alphanumeric characters and _')
106

    
107
def esc_name_by_module(module, name, ignore_case=False):
108
    if module == 'psycopg2':
109
        if ignore_case:
110
            # Don't enclose in quotes because this disables case-insensitivity
111
            check_name(name)
112
            return name
113
        else: quote = '"'
114
    elif module == 'MySQLdb': quote = '`'
115
    else: raise NotImplementedError("Can't escape name for "+module+' database')
116
    return quote + name.replace(quote, '') + quote
117

    
118
def esc_name_by_engine(engine, name, **kw_args):
119
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
120

    
121
def esc_name(db, name, **kw_args):
122
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
123

    
124
def qual_name(db, schema, table):
125
    def esc_name_(name): return esc_name(db, name)
126
    table = esc_name_(table)
127
    if schema != None: return esc_name_(schema)+'.'+table
128
    else: return table
129

    
130
##### Database connections
131

    
132
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
133

    
134
db_engines = {
135
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
136
    'PostgreSQL': ('psycopg2', {}),
137
}
138

    
139
DatabaseErrors_set = set([DbException])
140
DatabaseErrors = tuple(DatabaseErrors_set)
141

    
142
def _add_module(module):
143
    DatabaseErrors_set.add(module.DatabaseError)
144
    global DatabaseErrors
145
    DatabaseErrors = tuple(DatabaseErrors_set)
146

    
147
def db_config_str(db_config):
148
    return db_config['engine']+' database '+db_config['database']
149

    
150
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
151

    
152
log_debug_none = lambda msg: None
153

    
154
class DbConn:
155
    def __init__(self, db_config, serializable=True, autocommit=False,
156
        caching=True, log_debug=log_debug_none):
157
        self.db_config = db_config
158
        self.serializable = serializable
159
        self.autocommit = autocommit
160
        self.caching = caching
161
        self.log_debug = log_debug
162
        self.debug = log_debug != log_debug_none
163
        
164
        self.__db = None
165
        self.query_results = {}
166
        self._savepoint = 0
167
    
168
    def __getattr__(self, name):
169
        if name == '__dict__': raise Exception('getting __dict__')
170
        if name == 'db': return self._db()
171
        else: raise AttributeError()
172
    
173
    def __getstate__(self):
174
        state = copy.copy(self.__dict__) # shallow copy
175
        state['log_debug'] = None # don't pickle the debug callback
176
        state['_DbConn__db'] = None # don't pickle the connection
177
        return state
178
    
179
    def connected(self): return self.__db != None
180
    
181
    def _db(self):
182
        if self.__db == None:
183
            # Process db_config
184
            db_config = self.db_config.copy() # don't modify input!
185
            schemas = db_config.pop('schemas', None)
186
            module_name, mappings = db_engines[db_config.pop('engine')]
187
            module = __import__(module_name)
188
            _add_module(module)
189
            for orig, new in mappings.iteritems():
190
                try: util.rename_key(db_config, orig, new)
191
                except KeyError: pass
192
            
193
            # Connect
194
            self.__db = module.connect(**db_config)
195
            
196
            # Configure connection
197
            if self.serializable and not self.autocommit: run_raw_query(self,
198
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
199
            if schemas != None:
200
                schemas_ = ''.join((esc_name(self, s)+', '
201
                    for s in schemas.split(',')))
202
                run_raw_query(self, "SELECT set_config('search_path', \
203
%s || current_setting('search_path'), false)", [schemas_])
204
        
205
        return self.__db
206
    
207
    class DbCursor(Proxy):
208
        def __init__(self, outer):
209
            Proxy.__init__(self, outer.db.cursor())
210
            self.outer = outer
211
            self.query_results = outer.query_results
212
            self.query_lookup = None
213
            self.result = []
214
        
215
        def execute(self, query, params=None):
216
            self._is_insert = query.upper().find('INSERT') >= 0
217
            self.query_lookup = _query_lookup(query, params)
218
            try:
219
                try:
220
                    return_value = self.inner.execute(query, params)
221
                    self.outer.do_autocommit()
222
                finally: self.query = get_cur_query(self.inner)
223
            except Exception, e:
224
                _add_cursor_info(e, self, query, params)
225
                self.result = e # cache the exception as the result
226
                self._cache_result()
227
                raise
228
            # Fetch all rows so result will be cached
229
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
230
            return return_value
231
        
232
        def fetchone(self):
233
            row = self.inner.fetchone()
234
            if row != None: self.result.append(row)
235
            # otherwise, fetched all rows
236
            else: self._cache_result()
237
            return row
238
        
239
        def _cache_result(self):
240
            # For inserts, only cache exceptions since inserts are not
241
            # idempotent, but an invalid insert will always be invalid
242
            if self.query_results != None and (not self._is_insert
243
                or isinstance(self.result, Exception)):
244
                
245
                assert self.query_lookup != None
246
                self.query_results[self.query_lookup] = self.CacheCursor(
247
                    util.dict_subset(dicts.AttrsDictView(self),
248
                    ['query', 'result', 'rowcount', 'description']))
249
        
250
        class CacheCursor:
251
            def __init__(self, cached_result): self.__dict__ = cached_result
252
            
253
            def execute(self, *args, **kw_args):
254
                if isinstance(self.result, Exception): raise self.result
255
                # otherwise, result is a rows list
256
                self.iter = iter(self.result)
257
            
258
            def fetchone(self):
259
                try: return self.iter.next()
260
                except StopIteration: return None
261
    
262
    def esc_value(self, value):
263
        module = util.root_module(self.db)
264
        if module == 'psycopg2': return self.db.cursor().mogrify('%s', [value])
265
        elif module == 'MySQLdb':
266
            import _mysql
267
            return _mysql.escape_string(value)
268
        else: raise NotImplementedError("Can't escape value for "+module
269
            +' database')
270
    
271
    def run_query(self, query, params=None, cacheable=False):
272
        '''Translates known DB errors to typed exceptions:
273
        See self.DbCursor.execute().'''
274
        assert query != None
275
        
276
        if not self.caching: cacheable = False
277
        used_cache = False
278
        try:
279
            # Get cursor
280
            if cacheable:
281
                query_lookup = _query_lookup(query, params)
282
                try:
283
                    cur = self.query_results[query_lookup]
284
                    used_cache = True
285
                except KeyError: cur = self.DbCursor(self)
286
            else: cur = self.db.cursor()
287
            
288
            # Run query
289
            cur.execute(query, params)
290
        finally:
291
            if self.debug: # only compute msg if needed
292
                if used_cache: cache_status = 'Cache hit'
293
                elif cacheable: cache_status = 'Cache miss'
294
                else: cache_status = 'Non-cacheable'
295
                self.log_debug(cache_status+': '
296
                    +strings.one_line(str(get_cur_query(cur, query, params))))
297
        
298
        return cur
299
    
300
    def is_cached(self, query, params=None):
301
        return _query_lookup(query, params) in self.query_results
302
    
303
    def with_savepoint(self, func):
304
        savepoint = 'level_'+str(self._savepoint)
305
        self.run_query('SAVEPOINT '+savepoint)
306
        self._savepoint += 1
307
        try: 
308
            try: return_val = func()
309
            finally:
310
                self._savepoint -= 1
311
                assert self._savepoint >= 0
312
        except:
313
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint)
314
            raise
315
        else:
316
            self.run_query('RELEASE SAVEPOINT '+savepoint)
317
            self.do_autocommit()
318
            return return_val
319
    
320
    def do_autocommit(self):
321
        '''Autocommits if outside savepoint'''
322
        assert self._savepoint >= 0
323
        if self.autocommit and self._savepoint == 0:
324
            self.log_debug('Autocommiting')
325
            self.db.commit()
326

    
327
connect = DbConn
328

    
329
##### Querying
330

    
331
def run_raw_query(db, *args, **kw_args):
332
    '''For params, see DbConn.run_query()'''
333
    return db.run_query(*args, **kw_args)
334

    
335
def mogrify(db, query, params):
336
    module = util.root_module(db.db)
337
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
338
    else: raise NotImplementedError("Can't mogrify query for "+module+
339
        ' database')
340

    
341
##### Recoverable querying
342

    
343
def with_savepoint(db, func): return db.with_savepoint(func)
344

    
345
def run_query(db, query, params=None, recover=None, cacheable=False):
346
    if recover == None: recover = False
347
    
348
    try:
349
        def run(): return run_raw_query(db, query, params, cacheable)
350
        if recover and not db.is_cached(query, params):
351
            return with_savepoint(db, run)
352
        else: return run() # don't need savepoint if cached
353
    except Exception, e:
354
        if not recover: raise # need savepoint to run index_cols()
355
        msg = exc.str_(e)
356
        
357
        match = re.search(r'duplicate key value violates unique constraint '
358
            r'"((_?[^\W_]+)_[^"]+)"', msg)
359
        if match:
360
            constraint, table = match.groups()
361
            try: cols = index_cols(db, table, constraint)
362
            except NotImplementedError: raise e
363
            else: raise DuplicateKeyException(cols, e)
364
        
365
        match = re.search(r'null value in column "(\w+)" violates not-null '
366
            r'constraint', msg)
367
        if match: raise NullValueException([match.group(1)], e)
368
        
369
        match = re.search(r'invalid input (?:syntax|value)\b.*: "(.+)"\n'
370
            r'(?:(?s).*)\bfunction "(\w+)".*\bat assignment', msg)
371
        if match:
372
            raise FunctionValueException(match.group(2),
373
                strings.to_unicode(match.group(1)), e)
374
        
375
        match = re.search(r'relation "(\w+)" already exists', msg)
376
        if match: raise DuplicateTableException(match.group(1), e)
377
        
378
        match = re.search(r'function "(\w+)" already exists', msg)
379
        if match: raise DuplicateFunctionException(match.group(1), e)
380
        
381
        raise # no specific exception raised
382

    
383
##### Basic queries
384

    
385
def next_version(name):
386
    '''Prepends the version # so it won't be removed if the name is truncated'''
387
    version = 1 # first existing name was version 0
388
    match = re.match(r'^v(\d+)_(.*)$', name)
389
    if match:
390
        version = int(match.group(1))+1
391
        name = match.group(2)
392
    return 'v'+str(version)+'_'+name
393

    
394
def run_query_into(db, query, params, into_ref=None, *args, **kw_args):
395
    '''Outputs a query to a temp table.
396
    For params, see run_query().
397
    '''
398
    if into_ref == None: return run_query(db, query, params, *args, **kw_args)
399
    else: # place rows in temp table
400
        check_name(into_ref[0])
401
        kw_args['recover'] = True
402
        while True:
403
            try:
404
                create_query = 'CREATE'
405
                if not db.debug: create_query += ' TEMP'
406
                create_query += ' TABLE '+into_ref[0]+' AS '+query
407
                
408
                return run_query(db, create_query, params, *args, **kw_args)
409
                    # CREATE TABLE AS sets rowcount to # rows in query
410
            except DuplicateTableException, e:
411
                into_ref[0] = next_version(into_ref[0])
412
                # try again with next version of name
413

    
414
order_by_pkey = object() # tells mk_select() to order by the pkey
415

    
416
join_using = object() # tells mk_select() to join the column with USING
417

    
418
filter_out = object() # tells mk_select() to filter out rows that match the join
419

    
420
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
421

    
422
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
423
    start=None, order_by=order_by_pkey, table_is_esc=False, default_table=None):
424
    '''
425
    @param tables The single table to select from, or a list of tables to join
426
        together: [table0, (table1, joins), ...]
427
        
428
        joins has the format: dict(right_col=left_col, ...)
429
        * if left_col is join_using, left_col is set to right_col
430
        * if left_col is filter_out, the tables are LEFT JOINed together and the
431
          query is filtered by `right_col IS NULL` (indicating no match)
432
    @param fields Use None to select all fields in the table
433
    @param conds WHERE conditions: dict(compare_left_side=compare_right_side):
434
        * compare_left_side: Code|str (for col name)
435
        * compare_right_side: ValueCond|literal value
436
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
437
        use all columns
438
    @param table_is_esc Whether the table name has already been escaped
439
    @return tuple(query, params)
440
    '''
441
    def esc_name_(name): return esc_name(db, name)
442
    
443
    if not lists.is_seq(tables): tables = [tables]
444
    tables = list(tables) # don't modify input! (list() copies input)
445
    table0 = tables.pop(0) # first table is separate
446
    
447
    if conds == None: conds = {}
448
    assert limit == None or type(limit) == int
449
    assert start == None or type(start) == int
450
    if order_by is order_by_pkey:
451
        order_by = pkey(db, table0, recover=True, table_is_esc=table_is_esc)
452
    if not table_is_esc: table0 = esc_name_(table0)
453
    
454
    params = []
455
    
456
    def parse_col(field):
457
        '''Parses fields'''
458
        return sql_gen.value2sql_gen(field, default_table, table_is_esc,
459
            assume_col=True).to_str(db)
460
    def cond(entry):
461
        '''Parses conditions'''
462
        left, right = entry
463
        return sql_gen.cond2sql_gen(right).to_str(db, sql_gen.col2sql_gen(left))
464
    
465
    query = 'SELECT'
466
    
467
    # DISTINCT ON columns
468
    if distinct_on != []:
469
        query += ' DISTINCT'
470
        if distinct_on is not distinct_on_all:
471
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
472
    
473
    # Columns
474
    query += ' '
475
    if fields == None: query += '*'
476
    else: query += ', '.join(map(parse_col, fields))
477
    
478
    # Main table
479
    query += ' FROM '+table0
480
    
481
    # Add joins
482
    left_table = table0
483
    for table, joins in tables:
484
        if not table_is_esc: table = esc_name_(table)
485
        
486
        left_join = False
487
        
488
        # Parse special values
489
        joins = joins.copy() # don't modify input!
490
        for right, left in joins.items():
491
            if left is filter_out:
492
                left_join = True
493
                # Can't use join_using because the columns being joined can have
494
                # different values in a LEFT JOIN.
495
                # Use '~=' because it's OK to pass NULLs through.
496
                joins[right] = sql_gen.CompareCond(sql_gen.col2sql_gen(right,
497
                    left_table, table_is_esc), '~=')
498
                conds[(table, right)] = None # filter query by no match
499
        
500
        def join(entry):
501
            '''Parses non-USING joins'''
502
            right_col, left_col = entry
503
            
504
            # Parse special values
505
            if left_col == None: left_col = (left_col,)
506
                # for None values, tuple is optional
507
            elif left_col is join_using: left_col = right_col
508
            
509
            return cond((sql_gen.col2sql_gen(right_col, table, table_is_esc),
510
                sql_gen.cond2sql_gen(left_col, left_table, table_is_esc,
511
                    assume_col=True)))
512
        
513
        # Create join condition and determine join type
514
        if reduce(operator.and_, (v is join_using for v in joins.itervalues())):
515
            # all cols w/ USING, so can use simpler USING syntax
516
            join_cond = 'USING ('+(', '.join(joins.iterkeys()))+')'
517
        else: join_cond = 'ON '+(' AND '.join(map(join, joins.iteritems())))
518
        
519
        # Create join
520
        if left_join: query += ' LEFT'
521
        query += ' JOIN '+table+' '+join_cond
522
        
523
        left_table = table
524
    
525
    missing = True
526
    if conds != {}:
527
        query += ' WHERE '+(' AND '.join(map(cond, conds.iteritems())))
528
        params += conds.values()
529
        missing = False
530
    if order_by != None:
531
        query += ' ORDER BY '+sql_gen.col2sql_gen(order_by, table0,
532
            table_is_esc).to_str(db)
533
    if limit != None: query += ' LIMIT '+str(limit); missing = False
534
    if start != None:
535
        if start != 0: query += ' OFFSET '+str(start)
536
        missing = False
537
    if missing: warnings.warn(DbWarning(
538
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
539
    
540
    return (query, params)
541

    
542
def select(db, *args, **kw_args):
543
    '''For params, see mk_select() and run_query()'''
544
    recover = kw_args.pop('recover', None)
545
    cacheable = kw_args.pop('cacheable', True)
546
    
547
    query, params = mk_select(db, *args, **kw_args)
548
    return run_query(db, query, params, recover, cacheable)
549

    
550
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
551
    returning=None, embeddable=False, table_is_esc=False):
552
    '''
553
    @param returning str|None An inserted column (such as pkey) to return
554
    @param embeddable Whether the query should be embeddable as a nested SELECT.
555
        Warning: If you set this and cacheable=True when the query is run, the
556
        query will be fully cached, not just if it raises an exception.
557
    @param table_is_esc Whether the table name has already been escaped
558
    '''
559
    if select_query == None: select_query = 'DEFAULT VALUES'
560
    if cols == []: cols = None # no cols (all defaults) = unknown col names
561
    if not table_is_esc: check_name(table)
562
    
563
    # Build query
564
    query = 'INSERT INTO '+table
565
    if cols != None:
566
        map(check_name, cols)
567
        query += ' ('+', '.join(cols)+')'
568
    query += ' '+select_query
569
    
570
    if returning != None:
571
        check_name(returning)
572
        query += ' RETURNING '+returning
573
    
574
    if embeddable:
575
        # Create function
576
        function_name = '_'.join(map(clean_name, ['insert', table] + cols))
577
        return_type = 'SETOF '+table+'.'+returning+'%TYPE'
578
        while True:
579
            try:
580
                function = function_name
581
                if not db.debug: function = 'pg_temp.'+function
582
                
583
                function_query = '''\
584
CREATE FUNCTION '''+function+'''() RETURNS '''+return_type+'''
585
    LANGUAGE sql
586
    AS $$'''+mogrify(db, query, params)+''';$$;
587
'''
588
                run_query(db, function_query, recover=True, cacheable=True)
589
                break # this version was successful
590
            except DuplicateFunctionException, e:
591
                function_name = next_version(function_name)
592
                # try again with next version of name
593
        
594
        # Return query that uses function
595
        return mk_select(db, function+'() AS f ('+returning+')', start=0,
596
            order_by=None, table_is_esc=True)# AS clause requires function alias
597
    
598
    return (query, params)
599

    
600
def insert_select(db, *args, **kw_args):
601
    '''For params, see mk_insert_select() and run_query_into()
602
    @param into_ref List with name of temp table to place RETURNING values in
603
    '''
604
    into_ref = kw_args.pop('into_ref', None)
605
    if into_ref != None: kw_args['embeddable'] = True
606
    recover = kw_args.pop('recover', None)
607
    cacheable = kw_args.pop('cacheable', True)
608
    
609
    query, params = mk_insert_select(db, *args, **kw_args)
610
    return run_query_into(db, query, params, into_ref, recover=recover,
611
        cacheable=cacheable)
612

    
613
default = object() # tells insert() to use the default value for a column
614

    
615
def insert(db, table, row, *args, **kw_args):
616
    '''For params, see insert_select()'''
617
    if lists.is_seq(row): cols = None
618
    else:
619
        cols = row.keys()
620
        row = row.values()
621
    row = list(row) # ensure that "!= []" works
622
    
623
    # Check for special values
624
    labels = []
625
    values = []
626
    for value in row:
627
        if value is default: labels.append('DEFAULT')
628
        else:
629
            labels.append('%s')
630
            values.append(value)
631
    
632
    # Build query
633
    if values != []: query = ' VALUES ('+(', '.join(labels))+')'
634
    else: query = None
635
    
636
    return insert_select(db, table, cols, query, values, *args, **kw_args)
637

    
638
def last_insert_id(db):
639
    module = util.root_module(db.db)
640
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
641
    elif module == 'MySQLdb': return db.insert_id()
642
    else: return None
643

    
644
def truncate(db, table, schema='public'):
645
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
646

    
647
##### Database structure queries
648

    
649
def pkey(db, table, recover=None, table_is_esc=False):
650
    '''Assumed to be first column in table'''
651
    return col_names(select(db, table, limit=0, order_by=None, recover=recover,
652
        table_is_esc=table_is_esc)).next()
653

    
654
def index_cols(db, table, index):
655
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
656
    automatically created. When you don't know whether something is a UNIQUE
657
    constraint or a UNIQUE index, use this function.'''
658
    check_name(table)
659
    check_name(index)
660
    module = util.root_module(db.db)
661
    if module == 'psycopg2':
662
        return list(values(run_query(db, '''\
663
SELECT attname
664
FROM
665
(
666
        SELECT attnum, attname
667
        FROM pg_index
668
        JOIN pg_class index ON index.oid = indexrelid
669
        JOIN pg_class table_ ON table_.oid = indrelid
670
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
671
        WHERE
672
            table_.relname = %(table)s
673
            AND index.relname = %(index)s
674
    UNION
675
        SELECT attnum, attname
676
        FROM
677
        (
678
            SELECT
679
                indrelid
680
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
681
                    AS indkey
682
            FROM pg_index
683
            JOIN pg_class index ON index.oid = indexrelid
684
            JOIN pg_class table_ ON table_.oid = indrelid
685
            WHERE
686
                table_.relname = %(table)s
687
                AND index.relname = %(index)s
688
        ) s
689
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
690
) s
691
ORDER BY attnum
692
''',
693
            {'table': table, 'index': index}, cacheable=True)))
694
    else: raise NotImplementedError("Can't list index columns for "+module+
695
        ' database')
696

    
697
def constraint_cols(db, table, constraint):
698
    check_name(table)
699
    check_name(constraint)
700
    module = util.root_module(db.db)
701
    if module == 'psycopg2':
702
        return list(values(run_query(db, '''\
703
SELECT attname
704
FROM pg_constraint
705
JOIN pg_class ON pg_class.oid = conrelid
706
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
707
WHERE
708
    relname = %(table)s
709
    AND conname = %(constraint)s
710
ORDER BY attnum
711
''',
712
            {'table': table, 'constraint': constraint})))
713
    else: raise NotImplementedError("Can't list constraint columns for "+module+
714
        ' database')
715

    
716
row_num_col = '_row_num'
717

    
718
def add_row_num(db, table):
719
    '''Adds a row number column to a table. Its name is in row_num_col. It will
720
    be the primary key.'''
721
    check_name(table)
722
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
723
        +' serial NOT NULL PRIMARY KEY')
724

    
725
def tables(db, schema='public', table_like='%'):
726
    module = util.root_module(db.db)
727
    params = {'schema': schema, 'table_like': table_like}
728
    if module == 'psycopg2':
729
        return values(run_query(db, '''\
730
SELECT tablename
731
FROM pg_tables
732
WHERE
733
    schemaname = %(schema)s
734
    AND tablename LIKE %(table_like)s
735
ORDER BY tablename
736
''',
737
            params, cacheable=True))
738
    elif module == 'MySQLdb':
739
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
740
            cacheable=True))
741
    else: raise NotImplementedError("Can't list tables for "+module+' database')
742

    
743
##### Database management
744

    
745
def empty_db(db, schema='public', **kw_args):
746
    '''For kw_args, see tables()'''
747
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
748

    
749
##### Heuristic queries
750

    
751
def put(db, table, row, pkey_=None, row_ct_ref=None):
752
    '''Recovers from errors.
753
    Only works under PostgreSQL (uses INSERT RETURNING).
754
    '''
755
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
756
    
757
    try:
758
        cur = insert(db, table, row, pkey_, recover=True)
759
        if row_ct_ref != None and cur.rowcount >= 0:
760
            row_ct_ref[0] += cur.rowcount
761
        return value(cur)
762
    except DuplicateKeyException, e:
763
        return value(select(db, table, [pkey_],
764
            util.dict_subset_right_join(row, e.cols), recover=True))
765

    
766
def get(db, table, row, pkey, row_ct_ref=None, create=False):
767
    '''Recovers from errors'''
768
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
769
    except StopIteration:
770
        if not create: raise
771
        return put(db, table, row, pkey, row_ct_ref) # insert new row
772

    
773
def put_table(db, out_table, in_tables, mapping, limit=None, start=0,
774
    row_ct_ref=None, table_is_esc=False):
775
    '''Recovers from errors.
776
    Only works under PostgreSQL (uses INSERT RETURNING).
777
    @param in_tables The main input table to select from, followed by a list of
778
        tables to join with it using the main input table's pkey
779
    @return (table, col) Where the pkeys (from INSERT RETURNING) are made
780
        available
781
    '''
782
    temp_prefix = clean_name(out_table)
783
    pkeys_ref = [temp_prefix+'_pkeys']
784
    
785
    # Join together input tables
786
    in_tables = in_tables[:] # don't modify input!
787
    in_tables0 = in_tables.pop(0) # first table is separate
788
    in_pkey = pkey(db, in_tables0, recover=True, table_is_esc=table_is_esc)
789
    in_pkey_col = sql_gen.col2sql_gen(in_pkey, in_tables0, table_is_esc)
790
    insert_joins = [in_tables0]+[(t, {in_pkey: join_using}) for t in in_tables]
791
    
792
    out_pkey = pkey(db, out_table, recover=True, table_is_esc=table_is_esc)
793
    out_pkey_col = sql_gen.col2sql_gen(out_pkey, out_table, table_is_esc)
794
    
795
    pkeys = [in_pkey, out_pkey]
796
    pkeys_cols = [in_pkey_col, out_pkey_col]
797
    
798
    pkeys_table_exists_ref = [False]
799
    def run_query_into_pkeys(query, params):
800
        if pkeys_table_exists_ref[0]:
801
            insert_select(db, pkeys_ref[0], pkeys, query, params)
802
        else:
803
            run_query_into(db, query, params, into_ref=pkeys_ref)
804
            pkeys_table_exists_ref[0] = True
805
    
806
    conds = {}
807
    distinct_on = []
808
    def mk_main_select(cols):
809
        return mk_select(db, insert_joins, cols, conds, distinct_on,
810
            order_by=None, limit=limit, start=start, table_is_esc=table_is_esc,
811
            default_table=in_tables0)
812
    
813
    def log_ignore(in_col, value):
814
        db.log_debug('Ignoring rows with '+in_col+' = '+value)
815
    
816
    # Do inserts and selects
817
    join_cols = {}
818
    filter_join_added = False
819
    out_pkeys_ref = [temp_prefix+'_out_pkeys']
820
    in_pkeys_ref = [temp_prefix+'_in_pkeys']
821
    while True:
822
        try:
823
            if join_cols != {}:
824
                select_joins = insert_joins + [(out_table, join_cols)]
825
                db.log_debug('Getting pkeys of already existing rows')
826
                run_query_into_pkeys(*mk_select(db, select_joins, pkeys_cols,
827
                    order_by=None, start=0, table_is_esc=table_is_esc))
828
                
829
                # Prepare to insert new rows
830
                input_join_cols = join_cols.values()
831
                distinct_on = filter(util.is_str, input_join_cols)
832
                if not filter_join_added:
833
                    insert_joins.append((pkeys_ref[0], {in_pkey: filter_out}))
834
                    filter_join_added = True
835
            
836
            db.log_debug('Inserting new rows')
837
            cur = insert_select(db, out_table, mapping.keys(),
838
                *mk_main_select(mapping.values()), returning=out_pkey,
839
                into_ref=out_pkeys_ref, recover=True, table_is_esc=table_is_esc)
840
            if row_ct_ref != None and cur.rowcount >= 0:
841
                row_ct_ref[0] += cur.rowcount
842
                add_row_num(db, out_pkeys_ref[0]) # for joining with input pkeys
843
            
844
            db.log_debug('Getting input pkeys corresponding to rows in insert')
845
            run_query_into(db, *mk_main_select([in_pkey]),
846
                into_ref=in_pkeys_ref)
847
            add_row_num(db, in_pkeys_ref[0]) # for joining with output pkeys
848
            
849
            db.log_debug('Joining together output and input pkeys')
850
            run_query_into_pkeys(*mk_select(db, [in_pkeys_ref[0],
851
                (out_pkeys_ref[0], {row_num_col: join_using})], pkeys, start=0))
852
            
853
            break # insert successful
854
        except DuplicateKeyException, e:
855
            old_join_cols = join_cols.copy()
856
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
857
            db.log_debug('Ignoring existing rows, comparing on '+str(join_cols))
858
            assert join_cols != old_join_cols # avoid infinite loops
859
            # rerun loop with additional constraints
860
        except NullValueException, e:
861
            out_col, = e.cols
862
            try: in_col = mapping[out_col]
863
            except KeyError: # no mapping for missing col, so every row invalid
864
                db.log_debug('Missing mapping for '+out_col)
865
                run_query_into_pkeys(*mk_select(db, insert_joins,
866
                    [in_pkey_col, sql_gen.NamedCode(out_pkey, None)],
867
                    order_by=None, start=0, table_is_esc=table_is_esc))
868
                break
869
            else:
870
                log_ignore(in_col, 'NULL')
871
                conds[in_col] = sql_gen.CompareCond(None, '!=')
872
                # rerun loop with additional constraints
873
        except FunctionValueException, e:
874
            assert e.name == sql_gen.unescape_table(out_table)
875
            out_col = 'value' # assume function param was named "value"
876
            in_col = mapping[out_col]
877
            value = e.value
878
            log_ignore(in_col, value)
879
            conds[in_col] = sql_gen.CompareCond(value, '!=')
880
            # rerun loop with additional constraints
881
    
882
    return (pkeys_ref[0], out_pkey)
883

    
884
##### Data cleanup
885

    
886
def cleanup_table(db, table, cols, table_is_esc=False):
887
    def esc_name_(name): return esc_name(db, name)
888
    
889
    if not table_is_esc: check_name(table)
890
    cols = map(esc_name_, cols)
891
    
892
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
893
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
894
            for col in cols))),
895
        dict(null0='', null1=r'\N'))
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