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1
# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
26
    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+str(name), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self,
45
            'for name: '+str(name)+'; value: '+repr(value), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+name+ ' constraint on columns: '
52
            +(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class NameException(DbException): pass
57

    
58
class DuplicateKeyException(ConstraintException): pass
59

    
60
class NullValueException(ConstraintException): pass
61

    
62
class FunctionValueException(ExceptionWithNameValue): pass
63

    
64
class DuplicateTableException(ExceptionWithName): pass
65

    
66
class DuplicateFunctionException(ExceptionWithName): pass
67

    
68
class EmptyRowException(DbException): pass
69

    
70
##### Warnings
71

    
72
class DbWarning(UserWarning): pass
73

    
74
##### Result retrieval
75

    
76
def col_names(cur): return (col[0] for col in cur.description)
77

    
78
def rows(cur): return iter(lambda: cur.fetchone(), None)
79

    
80
def consume_rows(cur):
81
    '''Used to fetch all rows so result will be cached'''
82
    iters.consume_iter(rows(cur))
83

    
84
def next_row(cur): return rows(cur).next()
85

    
86
def row(cur):
87
    row_ = next_row(cur)
88
    consume_rows(cur)
89
    return row_
90

    
91
def next_value(cur): return next_row(cur)[0]
92

    
93
def value(cur): return row(cur)[0]
94

    
95
def values(cur): return iters.func_iter(lambda: next_value(cur))
96

    
97
def value_or_none(cur):
98
    try: return value(cur)
99
    except StopIteration: return None
100

    
101
##### Input validation
102

    
103
def check_name(name):
104
    if re.search(r'\W', name) != None: raise NameException('Name "'+name
105
        +'" may contain only alphanumeric characters and _')
106

    
107
def esc_name_by_module(module, name, ignore_case=False):
108
    if module == 'psycopg2' or module == None:
109
        if ignore_case:
110
            # Don't enclose in quotes because this disables case-insensitivity
111
            check_name(name)
112
            return name
113
        else: quote = '"'
114
    elif module == 'MySQLdb': quote = '`'
115
    else: raise NotImplementedError("Can't escape name for "+module+' database')
116
    return quote + name.replace(quote, '') + quote
117

    
118
def esc_name_by_engine(engine, name, **kw_args):
119
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
120

    
121
def esc_name(db, name, **kw_args):
122
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
123

    
124
def qual_name(db, schema, table):
125
    def esc_name_(name): return esc_name(db, name)
126
    table = esc_name_(table)
127
    if schema != None: return esc_name_(schema)+'.'+table
128
    else: return table
129

    
130
##### Database connections
131

    
132
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
133

    
134
db_engines = {
135
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
136
    'PostgreSQL': ('psycopg2', {}),
137
}
138

    
139
DatabaseErrors_set = set([DbException])
140
DatabaseErrors = tuple(DatabaseErrors_set)
141

    
142
def _add_module(module):
143
    DatabaseErrors_set.add(module.DatabaseError)
144
    global DatabaseErrors
145
    DatabaseErrors = tuple(DatabaseErrors_set)
146

    
147
def db_config_str(db_config):
148
    return db_config['engine']+' database '+db_config['database']
149

    
150
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
151

    
152
log_debug_none = lambda msg: None
153

    
154
class DbConn:
155
    def __init__(self, db_config, serializable=True, autocommit=False,
156
        caching=True, log_debug=log_debug_none):
157
        self.db_config = db_config
158
        self.serializable = serializable
159
        self.autocommit = autocommit
160
        self.caching = caching
161
        self.log_debug = log_debug
162
        self.debug = log_debug != log_debug_none
163
        
164
        self.__db = None
165
        self.query_results = {}
166
        self._savepoint = 0
167
    
168
    def __getattr__(self, name):
169
        if name == '__dict__': raise Exception('getting __dict__')
170
        if name == 'db': return self._db()
171
        else: raise AttributeError()
172
    
173
    def __getstate__(self):
174
        state = copy.copy(self.__dict__) # shallow copy
175
        state['log_debug'] = None # don't pickle the debug callback
176
        state['_DbConn__db'] = None # don't pickle the connection
177
        return state
178
    
179
    def connected(self): return self.__db != None
180
    
181
    def _db(self):
182
        if self.__db == None:
183
            # Process db_config
184
            db_config = self.db_config.copy() # don't modify input!
185
            schemas = db_config.pop('schemas', None)
186
            module_name, mappings = db_engines[db_config.pop('engine')]
187
            module = __import__(module_name)
188
            _add_module(module)
189
            for orig, new in mappings.iteritems():
190
                try: util.rename_key(db_config, orig, new)
191
                except KeyError: pass
192
            
193
            # Connect
194
            self.__db = module.connect(**db_config)
195
            
196
            # Configure connection
197
            if self.serializable and not self.autocommit: run_raw_query(self,
198
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
199
            if schemas != None:
200
                schemas_ = ''.join((esc_name(self, s)+', '
201
                    for s in schemas.split(',')))
202
                run_raw_query(self, "SELECT set_config('search_path', \
203
%s || current_setting('search_path'), false)", [schemas_])
204
        
205
        return self.__db
206
    
207
    class DbCursor(Proxy):
208
        def __init__(self, outer):
209
            Proxy.__init__(self, outer.db.cursor())
210
            self.outer = outer
211
            self.query_results = outer.query_results
212
            self.query_lookup = None
213
            self.result = []
214
        
215
        def execute(self, query, params=None):
216
            self._is_insert = query.upper().find('INSERT') >= 0
217
            self.query_lookup = _query_lookup(query, params)
218
            try:
219
                try:
220
                    return_value = self.inner.execute(query, params)
221
                    self.outer.do_autocommit()
222
                finally: self.query = get_cur_query(self.inner)
223
            except Exception, e:
224
                _add_cursor_info(e, self, query, params)
225
                self.result = e # cache the exception as the result
226
                self._cache_result()
227
                raise
228
            # Fetch all rows so result will be cached
229
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
230
            return return_value
231
        
232
        def fetchone(self):
233
            row = self.inner.fetchone()
234
            if row != None: self.result.append(row)
235
            # otherwise, fetched all rows
236
            else: self._cache_result()
237
            return row
238
        
239
        def _cache_result(self):
240
            # For inserts, only cache exceptions since inserts are not
241
            # idempotent, but an invalid insert will always be invalid
242
            if self.query_results != None and (not self._is_insert
243
                or isinstance(self.result, Exception)):
244
                
245
                assert self.query_lookup != None
246
                self.query_results[self.query_lookup] = self.CacheCursor(
247
                    util.dict_subset(dicts.AttrsDictView(self),
248
                    ['query', 'result', 'rowcount', 'description']))
249
        
250
        class CacheCursor:
251
            def __init__(self, cached_result): self.__dict__ = cached_result
252
            
253
            def execute(self, *args, **kw_args):
254
                if isinstance(self.result, Exception): raise self.result
255
                # otherwise, result is a rows list
256
                self.iter = iter(self.result)
257
            
258
            def fetchone(self):
259
                try: return self.iter.next()
260
                except StopIteration: return None
261
    
262
    def esc_value(self, value):
263
        module = util.root_module(self.db)
264
        if module == 'psycopg2': str_ = self.db.cursor().mogrify('%s', [value])
265
        elif module == 'MySQLdb':
266
            import _mysql
267
            str_ = _mysql.escape_string(value)
268
        else: raise NotImplementedError("Can't escape value for "+module
269
            +' database')
270
        return strings.to_unicode(str_)
271
    
272
    def esc_name(self, name): return esc_name(self, name) # calls global func
273
    
274
    def run_query(self, query, params=None, cacheable=False):
275
        '''Translates known DB errors to typed exceptions:
276
        See self.DbCursor.execute().'''
277
        assert query != None
278
        
279
        if not self.caching: cacheable = False
280
        used_cache = False
281
        try:
282
            # Get cursor
283
            if cacheable:
284
                query_lookup = _query_lookup(query, params)
285
                try:
286
                    cur = self.query_results[query_lookup]
287
                    used_cache = True
288
                except KeyError: cur = self.DbCursor(self)
289
            else: cur = self.db.cursor()
290
            
291
            # Run query
292
            cur.execute(query, params)
293
        finally:
294
            if self.debug: # only compute msg if needed
295
                if used_cache: cache_status = 'Cache hit'
296
                elif cacheable: cache_status = 'Cache miss'
297
                else: cache_status = 'Non-cacheable'
298
                self.log_debug(cache_status+': '
299
                    +strings.one_line(str(get_cur_query(cur, query, params))))
300
        
301
        return cur
302
    
303
    def is_cached(self, query, params=None):
304
        return _query_lookup(query, params) in self.query_results
305
    
306
    def with_savepoint(self, func):
307
        savepoint = 'level_'+str(self._savepoint)
308
        self.run_query('SAVEPOINT '+savepoint)
309
        self._savepoint += 1
310
        try: 
311
            try: return_val = func()
312
            finally:
313
                self._savepoint -= 1
314
                assert self._savepoint >= 0
315
        except:
316
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint)
317
            raise
318
        else:
319
            self.run_query('RELEASE SAVEPOINT '+savepoint)
320
            self.do_autocommit()
321
            return return_val
322
    
323
    def do_autocommit(self):
324
        '''Autocommits if outside savepoint'''
325
        assert self._savepoint >= 0
326
        if self.autocommit and self._savepoint == 0:
327
            self.log_debug('Autocommiting')
328
            self.db.commit()
329

    
330
connect = DbConn
331

    
332
##### Querying
333

    
334
def run_raw_query(db, *args, **kw_args):
335
    '''For params, see DbConn.run_query()'''
336
    return db.run_query(*args, **kw_args)
337

    
338
def mogrify(db, query, params):
339
    module = util.root_module(db.db)
340
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
341
    else: raise NotImplementedError("Can't mogrify query for "+module+
342
        ' database')
343

    
344
##### Recoverable querying
345

    
346
def with_savepoint(db, func): return db.with_savepoint(func)
347

    
348
def run_query(db, query, params=None, recover=None, cacheable=False):
349
    if recover == None: recover = False
350
    
351
    try:
352
        def run(): return run_raw_query(db, query, params, cacheable)
353
        if recover and not db.is_cached(query, params):
354
            return with_savepoint(db, run)
355
        else: return run() # don't need savepoint if cached
356
    except Exception, e:
357
        if not recover: raise # need savepoint to run index_cols()
358
        msg = exc.str_(e)
359
        
360
        match = re.search(r'duplicate key value violates unique constraint '
361
            r'"((_?[^\W_]+)_[^"]+?)"', msg)
362
        if match:
363
            constraint, table = match.groups()
364
            try: cols = index_cols(db, table, constraint)
365
            except NotImplementedError: raise e
366
            else: raise DuplicateKeyException(constraint, cols, e)
367
        
368
        match = re.search(r'null value in column "(\w+?)" violates not-null '
369
            r'constraint', msg)
370
        if match: raise NullValueException('NOT NULL', [match.group(1)], e)
371
        
372
        match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
373
            r'|date/time field value out of range): "(.+?)"\n'
374
            r'(?:(?s).*?)\bfunction "(\w+?)".*?\bat assignment', msg)
375
        if match:
376
            value, name = match.groups()
377
            raise FunctionValueException(name, strings.to_unicode(value), e)
378
        
379
        match = re.search(r'relation "(\w+?)" already exists', msg)
380
        if match: raise DuplicateTableException(match.group(1), e)
381
        
382
        match = re.search(r'function "(\w+?)" already exists', msg)
383
        if match: raise DuplicateFunctionException(match.group(1), e)
384
        
385
        raise # no specific exception raised
386

    
387
##### Basic queries
388

    
389
def next_version(name):
390
    '''Prepends the version # so it won't be removed if the name is truncated'''
391
    version = 1 # first existing name was version 0
392
    match = re.match(r'^v(\d+)_(.*)$', name)
393
    if match:
394
        version = int(match.group(1))+1
395
        name = match.group(2)
396
    return 'v'+str(version)+'_'+name
397

    
398
def run_query_into(db, query, params, into=None, *args, **kw_args):
399
    '''Outputs a query to a temp table.
400
    For params, see run_query().
401
    '''
402
    if into == None: return run_query(db, query, params, *args, **kw_args)
403
    else: # place rows in temp table
404
        assert isinstance(into, sql_gen.Table)
405
        
406
        kw_args['recover'] = True
407
        while True:
408
            try:
409
                create_query = 'CREATE'
410
                if not db.debug: create_query += ' TEMP'
411
                create_query += ' TABLE '+into.to_str(db)+' AS '+query
412
                
413
                return run_query(db, create_query, params, *args, **kw_args)
414
                    # CREATE TABLE AS sets rowcount to # rows in query
415
            except DuplicateTableException, e:
416
                into.name = next_version(into.name)
417
                # try again with next version of name
418

    
419
order_by_pkey = object() # tells mk_select() to order by the pkey
420

    
421
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
422

    
423
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
424
    start=None, order_by=order_by_pkey, default_table=None):
425
    '''
426
    @param tables The single table to select from, or a list of tables to join
427
        together, with tables after the first being sql_gen.Join objects
428
    @param fields Use None to select all fields in the table
429
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
430
        * container can be any iterable type
431
        * compare_left_side: Code|str (for col name)
432
        * compare_right_side: ValueCond|literal value
433
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
434
        use all columns
435
    @return tuple(query, params)
436
    '''
437
    # Parse tables param
438
    if not lists.is_seq(tables): tables = [tables]
439
    tables = list(tables) # don't modify input! (list() copies input)
440
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
441
    
442
    # Parse other params
443
    if conds == None: conds = []
444
    elif isinstance(conds, dict): conds = conds.items()
445
    conds = list(conds) # don't modify input! (list() copies input)
446
    assert limit == None or type(limit) == int
447
    assert start == None or type(start) == int
448
    if order_by is order_by_pkey:
449
        if distinct_on != []: order_by = None
450
        else: order_by = pkey(db, table0, recover=True)
451
    
452
    query = 'SELECT'
453
    
454
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
455
    
456
    # DISTINCT ON columns
457
    if distinct_on != []:
458
        query += ' DISTINCT'
459
        if distinct_on is not distinct_on_all:
460
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
461
    
462
    # Columns
463
    query += ' '
464
    if fields == None: query += '*'
465
    else: query += ', '.join(map(parse_col, fields))
466
    
467
    # Main table
468
    query += ' FROM '+table0.to_str(db)
469
    
470
    # Add joins
471
    left_table = table0
472
    for join_ in tables:
473
        table = join_.table
474
        
475
        # Parse special values
476
        if join_.type_ is sql_gen.filter_out: # filter no match
477
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
478
                None))
479
        
480
        query += ' '+join_.to_str(db, left_table)
481
        
482
        left_table = table
483
    
484
    missing = True
485
    if conds != []:
486
        query += ' WHERE '+(' AND '.join((sql_gen.as_ValueCond(r).to_str(db, l)
487
            for l, r in conds)))
488
        missing = False
489
    if order_by != None:
490
        query += ' ORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
491
    if limit != None: query += ' LIMIT '+str(limit); missing = False
492
    if start != None:
493
        if start != 0: query += ' OFFSET '+str(start)
494
        missing = False
495
    if missing: warnings.warn(DbWarning(
496
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
497
    
498
    return (query, [])
499

    
500
def select(db, *args, **kw_args):
501
    '''For params, see mk_select() and run_query()'''
502
    recover = kw_args.pop('recover', None)
503
    cacheable = kw_args.pop('cacheable', True)
504
    
505
    query, params = mk_select(db, *args, **kw_args)
506
    return run_query(db, query, params, recover, cacheable)
507

    
508
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
509
    returning=None, embeddable=False):
510
    '''
511
    @param returning str|None An inserted column (such as pkey) to return
512
    @param embeddable Whether the query should be embeddable as a nested SELECT.
513
        Warning: If you set this and cacheable=True when the query is run, the
514
        query will be fully cached, not just if it raises an exception.
515
    '''
516
    table = sql_gen.as_Table(table)
517
    if cols == []: cols = None # no cols (all defaults) = unknown col names
518
    if cols != None: cols = [sql_gen.as_Col(v).to_str(db) for v in cols]
519
    if select_query == None: select_query = 'DEFAULT VALUES'
520
    if returning != None: returning = sql_gen.as_Col(returning, table)
521
    
522
    # Build query
523
    query = 'INSERT INTO '+table.to_str(db)
524
    if cols != None: query += ' ('+', '.join(cols)+')'
525
    query += ' '+select_query
526
    
527
    if returning != None:
528
        returning_name = copy.copy(returning)
529
        returning_name.table = None
530
        returning_name = returning_name.to_str(db)
531
        query += ' RETURNING '+returning_name
532
    
533
    if embeddable:
534
        assert returning != None
535
        
536
        # Create function
537
        function_name = '_'.join(['insert', table.name] + cols)
538
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
539
        while True:
540
            try:
541
                func_schema = None
542
                if not db.debug: func_schema = 'pg_temp'
543
                function = sql_gen.Table(function_name, func_schema).to_str(db)
544
                
545
                function_query = '''\
546
CREATE FUNCTION '''+function+'''() RETURNS '''+return_type+'''
547
    LANGUAGE sql
548
    AS $$'''+mogrify(db, query, params)+''';$$;
549
'''
550
                run_query(db, function_query, recover=True, cacheable=True)
551
                break # this version was successful
552
            except DuplicateFunctionException, e:
553
                function_name = next_version(function_name)
554
                # try again with next version of name
555
        
556
        # Return query that uses function
557
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
558
            [returning_name]) # AS clause requires function alias
559
        return mk_select(db, func_table, start=0, order_by=None)
560
    
561
    return (query, params)
562

    
563
def insert_select(db, *args, **kw_args):
564
    '''For params, see mk_insert_select() and run_query_into()
565
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
566
        values in
567
    '''
568
    into = kw_args.pop('into', None)
569
    if into != None: kw_args['embeddable'] = True
570
    recover = kw_args.pop('recover', None)
571
    cacheable = kw_args.pop('cacheable', True)
572
    
573
    query, params = mk_insert_select(db, *args, **kw_args)
574
    return run_query_into(db, query, params, into, recover=recover,
575
        cacheable=cacheable)
576

    
577
default = object() # tells insert() to use the default value for a column
578

    
579
def insert(db, table, row, *args, **kw_args):
580
    '''For params, see insert_select()'''
581
    if lists.is_seq(row): cols = None
582
    else:
583
        cols = row.keys()
584
        row = row.values()
585
    row = list(row) # ensure that "!= []" works
586
    
587
    # Check for special values
588
    labels = []
589
    values = []
590
    for value in row:
591
        if value is default: labels.append('DEFAULT')
592
        else:
593
            labels.append('%s')
594
            values.append(value)
595
    
596
    # Build query
597
    if values != []: query = ' VALUES ('+(', '.join(labels))+')'
598
    else: query = None
599
    
600
    return insert_select(db, table, cols, query, values, *args, **kw_args)
601

    
602
def last_insert_id(db):
603
    module = util.root_module(db.db)
604
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
605
    elif module == 'MySQLdb': return db.insert_id()
606
    else: return None
607

    
608
def truncate(db, table, schema='public'):
609
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
610

    
611
##### Database structure queries
612

    
613
def table_cols(db, table, recover=None):
614
    return list(col_names(select(db, table, limit=0, order_by=None,
615
        recover=recover)))
616

    
617
def mk_flatten_mapping(db, tables, flat_table, preserve=[]):
618
    '''Creates a mapping from original column names (which may have collisions)
619
    to names that will be distinct among the given tables.
620
    This is meant to be used for several tables that are being joined together.
621
    @param flat_table The table for the new columns
622
    @param preserve List of columns not to rename
623
    @return dict(orig_col=new_col, ...)
624
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
625
        * new_col: sql_gen.Col(orig_col_name, flat_table)
626
        * All mappings use the flat_table table so its name can easily be
627
          changed for all columns at once
628
    '''
629
    flatten_mapping = {}
630
    for table in tables:
631
        for col in table_cols(db, table):
632
            col = sql_gen.as_Col(col, table)
633
            flatten_mapping[col] = sql_gen.Col(str(col), flat_table)
634
    for col in preserve:
635
        flatten_mapping[col] = sql_gen.Col(col.name, flat_table)
636
    return flatten_mapping
637

    
638
def pkey(db, table, recover=None):
639
    '''Assumed to be first column in table'''
640
    return table_cols(db, table, recover)[0]
641

    
642
not_null_col = 'not_null'
643

    
644
def table_not_null_col(db, table, recover=None):
645
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
646
    if not_null_col in table_cols(db, table, recover): return not_null_col
647
    else: return pkey(db, table, recover)
648

    
649
def index_cols(db, table, index):
650
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
651
    automatically created. When you don't know whether something is a UNIQUE
652
    constraint or a UNIQUE index, use this function.'''
653
    module = util.root_module(db.db)
654
    if module == 'psycopg2':
655
        return list(values(run_query(db, '''\
656
SELECT attname
657
FROM
658
(
659
        SELECT attnum, attname
660
        FROM pg_index
661
        JOIN pg_class index ON index.oid = indexrelid
662
        JOIN pg_class table_ ON table_.oid = indrelid
663
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
664
        WHERE
665
            table_.relname = %(table)s
666
            AND index.relname = %(index)s
667
    UNION
668
        SELECT attnum, attname
669
        FROM
670
        (
671
            SELECT
672
                indrelid
673
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
674
                    AS indkey
675
            FROM pg_index
676
            JOIN pg_class index ON index.oid = indexrelid
677
            JOIN pg_class table_ ON table_.oid = indrelid
678
            WHERE
679
                table_.relname = %(table)s
680
                AND index.relname = %(index)s
681
        ) s
682
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
683
) s
684
ORDER BY attnum
685
''',
686
            {'table': table, 'index': index}, cacheable=True)))
687
    else: raise NotImplementedError("Can't list index columns for "+module+
688
        ' database')
689

    
690
def constraint_cols(db, table, constraint):
691
    module = util.root_module(db.db)
692
    if module == 'psycopg2':
693
        return list(values(run_query(db, '''\
694
SELECT attname
695
FROM pg_constraint
696
JOIN pg_class ON pg_class.oid = conrelid
697
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
698
WHERE
699
    relname = %(table)s
700
    AND conname = %(constraint)s
701
ORDER BY attnum
702
''',
703
            {'table': table, 'constraint': constraint})))
704
    else: raise NotImplementedError("Can't list constraint columns for "+module+
705
        ' database')
706

    
707
row_num_col = '_row_num'
708

    
709
def add_row_num(db, table):
710
    '''Adds a row number column to a table. Its name is in row_num_col. It will
711
    be the primary key.'''
712
    table = sql_gen.as_Table(table).to_str(db)
713
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
714
        +' serial NOT NULL PRIMARY KEY')
715

    
716
def tables(db, schema='public', table_like='%'):
717
    module = util.root_module(db.db)
718
    params = {'schema': schema, 'table_like': table_like}
719
    if module == 'psycopg2':
720
        return values(run_query(db, '''\
721
SELECT tablename
722
FROM pg_tables
723
WHERE
724
    schemaname = %(schema)s
725
    AND tablename LIKE %(table_like)s
726
ORDER BY tablename
727
''',
728
            params, cacheable=True))
729
    elif module == 'MySQLdb':
730
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
731
            cacheable=True))
732
    else: raise NotImplementedError("Can't list tables for "+module+' database')
733

    
734
##### Database management
735

    
736
def empty_db(db, schema='public', **kw_args):
737
    '''For kw_args, see tables()'''
738
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
739

    
740
##### Heuristic queries
741

    
742
def put(db, table, row, pkey_=None, row_ct_ref=None):
743
    '''Recovers from errors.
744
    Only works under PostgreSQL (uses INSERT RETURNING).
745
    '''
746
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
747
    
748
    try:
749
        cur = insert(db, table, row, pkey_, recover=True)
750
        if row_ct_ref != None and cur.rowcount >= 0:
751
            row_ct_ref[0] += cur.rowcount
752
        return value(cur)
753
    except DuplicateKeyException, e:
754
        return value(select(db, table, [pkey_],
755
            util.dict_subset_right_join(row, e.cols), recover=True))
756

    
757
def get(db, table, row, pkey, row_ct_ref=None, create=False):
758
    '''Recovers from errors'''
759
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
760
    except StopIteration:
761
        if not create: raise
762
        return put(db, table, row, pkey, row_ct_ref) # insert new row
763

    
764
def put_table(db, out_table, in_tables, mapping, limit=None, start=0,
765
    row_ct_ref=None):
766
    '''Recovers from errors.
767
    Only works under PostgreSQL (uses INSERT RETURNING).
768
    @param in_tables The main input table to select from, followed by a list of
769
        tables to join with it using the main input table's pkey
770
    @param mapping dict(out_table_col=in_table_col, ...)
771
        * out_table_col: sql_gen.Col|str
772
        * in_table_col: sql_gen.Col Wrap literal values in a sql_gen.NamedCol
773
    @return sql_gen.Col Where the output pkeys are made available
774
    '''
775
    out_table = sql_gen.as_Table(out_table)
776
    for in_table_col in mapping.itervalues():
777
        assert isinstance(in_table_col, sql_gen.Col)
778
    
779
    temp_prefix = out_table.name
780
    pkeys = sql_gen.Table(temp_prefix+'_pkeys')
781
    
782
    # Create input joins from list of input tables
783
    in_tables_ = in_tables[:] # don't modify input!
784
    in_tables0 = in_tables_.pop(0) # first table is separate
785
    in_pkey = pkey(db, in_tables0, recover=True)
786
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
787
    input_joins = [in_tables0]+[sql_gen.Join(v, {in_pkey: sql_gen.join_same})
788
        for v in in_tables_]
789
    
790
    out_pkey = pkey(db, out_table, recover=True)
791
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
792
    
793
    pkeys_names = [in_pkey, out_pkey]
794
    pkeys_cols = [in_pkey_col, out_pkey_col]
795
    
796
    pkeys_table_exists_ref = [False]
797
    def run_query_into_pkeys(query, params):
798
        if pkeys_table_exists_ref[0]:
799
            insert_select(db, pkeys, pkeys_names, query, params)
800
        else:
801
            run_query_into(db, query, params, into=pkeys)
802
            pkeys_table_exists_ref[0] = True
803
    
804
    conds = set()
805
    distinct_on = []
806
    def mk_main_select(joins, cols):
807
        return mk_select(db, joins, cols, conds, distinct_on, limit=limit,
808
            start=start, default_table=in_tables0)
809
    
810
    def log_exc(e):
811
        db.log_debug('Caught exception: '+exc.str_(e, first_line_only=True))
812
    def ignore(in_col, value):
813
        db.log_debug('Ignoring rows with '+str(in_col)+' = '+repr(value))
814
        cond = (in_col, sql_gen.CompareCond(value, '!='))
815
        assert cond not in conds # avoid infinite loops
816
        conds.add(cond)
817
    
818
    # Do inserts and selects
819
    join_cols = {}
820
    out_pkeys = sql_gen.Table(temp_prefix+'_out_pkeys')
821
    in_pkeys = sql_gen.Table(temp_prefix+'_in_pkeys')
822
    while True:
823
        has_joins = join_cols != {}
824
        
825
        # Prepare to insert new rows
826
        insert_joins = input_joins[:] # don't modify original!
827
        insert_args = dict(recover=True)
828
        if has_joins:
829
            distinct_on = [v.to_Col() for v in join_cols.values()]
830
            insert_joins.append(sql_gen.Join(out_table, join_cols,
831
                sql_gen.filter_out))
832
        else:
833
            insert_args.update(dict(returning=out_pkey, into=out_pkeys))
834
        
835
        db.log_debug('Inserting new rows')
836
        try:
837
            cur = insert_select(db, out_table, mapping.keys(),
838
                *mk_main_select(insert_joins, mapping.values()), **insert_args)
839
            break # insert successful
840
        except DuplicateKeyException, e:
841
            log_exc(e)
842
            
843
            old_join_cols = join_cols.copy()
844
            join_cols.update(util.dict_subset(mapping, e.cols))
845
            db.log_debug('Ignoring existing rows, comparing on '+str(join_cols))
846
            assert join_cols != old_join_cols # avoid infinite loops
847
        except NullValueException, e:
848
            log_exc(e)
849
            
850
            out_col, = e.cols
851
            try: in_col = mapping[out_col]
852
            except KeyError:
853
                db.log_debug('Missing mapping for NOT NULL '+out_col)
854
                limit = 0 # just create an empty pkeys table
855
            else: ignore(in_col, None)
856
        except FunctionValueException, e:
857
            log_exc(e)
858
            
859
            assert e.name == out_table.name
860
            out_col = 'value' # assume function param was named "value"
861
            ignore(mapping[out_col], e.value)
862
        # after exception handled, rerun loop with additional constraints
863
    
864
    if row_ct_ref != None and cur.rowcount >= 0:
865
        row_ct_ref[0] += cur.rowcount
866
    
867
    if has_joins:
868
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
869
        db.log_debug('Getting output pkeys of existing/inserted rows')
870
        run_query_into_pkeys(*mk_select(db, select_joins, pkeys_cols, start=0))
871
    else:
872
        add_row_num(db, out_pkeys) # for joining with input pkeys
873
        
874
        db.log_debug('Getting input pkeys for rows in insert')
875
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
876
            into=in_pkeys)
877
        add_row_num(db, in_pkeys) # for joining with output pkeys
878
        
879
        db.log_debug('Joining together output and input pkeys')
880
        pkey_joins = [in_pkeys, sql_gen.Join(out_pkeys,
881
            {row_num_col: sql_gen.join_same_not_null})]
882
        run_query_into_pkeys(*mk_select(db, pkey_joins, pkeys_names, start=0))
883
    
884
    db.log_debug("Setting missing rows' pkeys to NULL")
885
    missing_rows_joins = input_joins+[sql_gen.Join(pkeys,
886
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
887
        # must use join_same_not_null or query will take forever
888
    run_query_into_pkeys(*mk_select(db, missing_rows_joins,
889
        [in_pkey_col, sql_gen.NamedCol(out_pkey, None)], start=0))
890
    
891
    return sql_gen.Col(out_pkey, pkeys)
892

    
893
##### Data cleanup
894

    
895
def cleanup_table(db, table, cols):
896
    def esc_name_(name): return esc_name(db, name)
897
    
898
    table = sql_gen.as_Table(table).to_str(db)
899
    cols = map(esc_name_, cols)
900
    
901
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
902
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
903
            for col in cols))),
904
        dict(null0='', null1=r'\N'))
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