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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  bin 2458 over 12 years Aaron Marcuse-Kubitza bin/map: Fixed bug where verbosity needed to be...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 2438 over 12 years Aaron Marcuse-Kubitza input.Makefile: Configuration: Removed debug va...
  lib 2460 over 12 years Aaron Marcuse-Kubitza sql_gen.py: Join.to_str(): Fixed bug where USIN...
  mappings 2364 over 12 years Aaron Marcuse-Kubitza mappings/DwC2-VegBIEN.specimens.csv: plantname....
  schemas 2412 over 12 years Aaron Marcuse-Kubitza schemas/functions.sql, vegbien.sql: Changed CAS...
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 9.47 KB 2095 over 12 years Aaron Marcuse-Kubitza main Makefile: VegBIEN DB: functions schema: Re...
README.TXT 2.7 KB 1967 over 12 years Aaron Marcuse-Kubitza main Makefile: VegBIEN DB: Install public schem...
map 978 Bytes 1979 over 12 years Aaron Marcuse-Kubitza root map: Fill in defaults for inputs from VegB...

Latest revisions

# Date Author Comment
2460 05/29/2012 02:53 PM Aaron Marcuse-Kubitza

sql_gen.py: Join.to_str(): Fixed bug where USING should be used if all columns are join_same_not_null, rather than join_same, because USING uses plain = for comparison. sql.py: put_table(): input_joins now can use sql_gen.join_same_not_null in order to use USING syntax.

2459 05/25/2012 07:14 PM Aaron Marcuse-Kubitza

db_xml.py: put_table(): Output debug messages with a level of 1.5 to match sql.put_table()'s level for summary messages

2458 05/25/2012 07:01 PM Aaron Marcuse-Kubitza

bin/map: Fixed bug where verbosity needed to be 1 outside of test mode so that profiling and errors stats would be printed at end of import. Verbosity defaults to 0.5 rather than 1 in test mode so profiling and errors stats do not clutter up the test output when running automated tests.

2457 05/25/2012 06:55 PM Aaron Marcuse-Kubitza

bin/map: Only display verbose_errors in test mode, but with any nonzero verbosity. They should not be displayed outside of test mode because verbose errors make the log files huge.

2456 05/25/2012 06:52 PM Aaron Marcuse-Kubitza

bin/map: Renamed verbose param to verbosity because it's now a number, not a boolean

2455 05/25/2012 06:51 PM Aaron Marcuse-Kubitza

bin/map: Removed no longer used debug param (verbose=2 is used instead)

2454 05/25/2012 06:48 PM Aaron Marcuse-Kubitza

bin/map: Fixed bug where verbose_errors' default value depended on debug var, which was not yet set. Removed verbose_errors param and instead turn verbose_errors on whenever verbosity >= 1. Verbosity defaults to 1 in test mode.

2453 05/25/2012 06:33 PM Aaron Marcuse-Kubitza

bin/map: Logging: Don't set sql.run_raw_query.debug, because it is not used anymore (sql.connect(log_debug=...) is used instead)

2452 05/25/2012 06:29 PM Aaron Marcuse-Kubitza

bin/map: Logging: Print debug messages (level > 1) prefixed with their level, to distinguish higher- and lower-level debug messages

2451 05/25/2012 06:22 PM Aaron Marcuse-Kubitza

sql.py: put_table(): Only display warning for exceptions with no handler (which are unexpected), not missing mappings for NOT NULL columns (which are normal in datasources without those columns)

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