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1
# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
26
    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+str(name), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self,
45
            'for name: '+str(name)+'; value: '+repr(value), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+name+ ' constraint on columns: '
52
            +(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class NameException(DbException): pass
57

    
58
class DuplicateKeyException(ConstraintException): pass
59

    
60
class NullValueException(ConstraintException): pass
61

    
62
class FunctionValueException(ExceptionWithNameValue): pass
63

    
64
class DuplicateTableException(ExceptionWithName): pass
65

    
66
class DuplicateFunctionException(ExceptionWithName): pass
67

    
68
class EmptyRowException(DbException): pass
69

    
70
##### Warnings
71

    
72
class DbWarning(UserWarning): pass
73

    
74
##### Result retrieval
75

    
76
def col_names(cur): return (col[0] for col in cur.description)
77

    
78
def rows(cur): return iter(lambda: cur.fetchone(), None)
79

    
80
def consume_rows(cur):
81
    '''Used to fetch all rows so result will be cached'''
82
    iters.consume_iter(rows(cur))
83

    
84
def next_row(cur): return rows(cur).next()
85

    
86
def row(cur):
87
    row_ = next_row(cur)
88
    consume_rows(cur)
89
    return row_
90

    
91
def next_value(cur): return next_row(cur)[0]
92

    
93
def value(cur): return row(cur)[0]
94

    
95
def values(cur): return iters.func_iter(lambda: next_value(cur))
96

    
97
def value_or_none(cur):
98
    try: return value(cur)
99
    except StopIteration: return None
100

    
101
##### Input validation
102

    
103
def clean_name(name): return re.sub(r'\W', r'', name.replace('.', '_'))
104

    
105
def check_name(name):
106
    if re.search(r'\W', name) != None: raise NameException('Name "'+name
107
        +'" may contain only alphanumeric characters and _')
108

    
109
def esc_name_by_module(module, name, ignore_case=False):
110
    if module == 'psycopg2' or module == None:
111
        if ignore_case:
112
            # Don't enclose in quotes because this disables case-insensitivity
113
            check_name(name)
114
            return name
115
        else: quote = '"'
116
    elif module == 'MySQLdb': quote = '`'
117
    else: raise NotImplementedError("Can't escape name for "+module+' database')
118
    return quote + name.replace(quote, '') + quote
119

    
120
def esc_name_by_engine(engine, name, **kw_args):
121
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
122

    
123
def esc_name(db, name, **kw_args):
124
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
125

    
126
def qual_name(db, schema, table):
127
    def esc_name_(name): return esc_name(db, name)
128
    table = esc_name_(table)
129
    if schema != None: return esc_name_(schema)+'.'+table
130
    else: return table
131

    
132
##### Database connections
133

    
134
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
135

    
136
db_engines = {
137
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
138
    'PostgreSQL': ('psycopg2', {}),
139
}
140

    
141
DatabaseErrors_set = set([DbException])
142
DatabaseErrors = tuple(DatabaseErrors_set)
143

    
144
def _add_module(module):
145
    DatabaseErrors_set.add(module.DatabaseError)
146
    global DatabaseErrors
147
    DatabaseErrors = tuple(DatabaseErrors_set)
148

    
149
def db_config_str(db_config):
150
    return db_config['engine']+' database '+db_config['database']
151

    
152
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
153

    
154
log_debug_none = lambda msg, level=2: None
155

    
156
class DbConn:
157
    def __init__(self, db_config, serializable=True, autocommit=False,
158
        caching=True, log_debug=log_debug_none):
159
        self.db_config = db_config
160
        self.serializable = serializable
161
        self.autocommit = autocommit
162
        self.caching = caching
163
        self.log_debug = log_debug
164
        self.debug = log_debug != log_debug_none
165
        
166
        self.__db = None
167
        self.query_results = {}
168
        self._savepoint = 0
169
    
170
    def __getattr__(self, name):
171
        if name == '__dict__': raise Exception('getting __dict__')
172
        if name == 'db': return self._db()
173
        else: raise AttributeError()
174
    
175
    def __getstate__(self):
176
        state = copy.copy(self.__dict__) # shallow copy
177
        state['log_debug'] = None # don't pickle the debug callback
178
        state['_DbConn__db'] = None # don't pickle the connection
179
        return state
180
    
181
    def connected(self): return self.__db != None
182
    
183
    def _db(self):
184
        if self.__db == None:
185
            # Process db_config
186
            db_config = self.db_config.copy() # don't modify input!
187
            schemas = db_config.pop('schemas', None)
188
            module_name, mappings = db_engines[db_config.pop('engine')]
189
            module = __import__(module_name)
190
            _add_module(module)
191
            for orig, new in mappings.iteritems():
192
                try: util.rename_key(db_config, orig, new)
193
                except KeyError: pass
194
            
195
            # Connect
196
            self.__db = module.connect(**db_config)
197
            
198
            # Configure connection
199
            if self.serializable and not self.autocommit: run_raw_query(self,
200
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
201
            if schemas != None:
202
                schemas_ = ''.join((esc_name(self, s)+', '
203
                    for s in schemas.split(',')))
204
                run_raw_query(self, "SELECT set_config('search_path', \
205
%s || current_setting('search_path'), false)", [schemas_])
206
        
207
        return self.__db
208
    
209
    class DbCursor(Proxy):
210
        def __init__(self, outer):
211
            Proxy.__init__(self, outer.db.cursor())
212
            self.outer = outer
213
            self.query_results = outer.query_results
214
            self.query_lookup = None
215
            self.result = []
216
        
217
        def execute(self, query, params=None):
218
            self._is_insert = query.upper().find('INSERT') >= 0
219
            self.query_lookup = _query_lookup(query, params)
220
            try:
221
                try:
222
                    return_value = self.inner.execute(query, params)
223
                    self.outer.do_autocommit()
224
                finally: self.query = get_cur_query(self.inner)
225
            except Exception, e:
226
                _add_cursor_info(e, self, query, params)
227
                self.result = e # cache the exception as the result
228
                self._cache_result()
229
                raise
230
            # Fetch all rows so result will be cached
231
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
232
            return return_value
233
        
234
        def fetchone(self):
235
            row = self.inner.fetchone()
236
            if row != None: self.result.append(row)
237
            # otherwise, fetched all rows
238
            else: self._cache_result()
239
            return row
240
        
241
        def _cache_result(self):
242
            # For inserts, only cache exceptions since inserts are not
243
            # idempotent, but an invalid insert will always be invalid
244
            if self.query_results != None and (not self._is_insert
245
                or isinstance(self.result, Exception)):
246
                
247
                assert self.query_lookup != None
248
                self.query_results[self.query_lookup] = self.CacheCursor(
249
                    util.dict_subset(dicts.AttrsDictView(self),
250
                    ['query', 'result', 'rowcount', 'description']))
251
        
252
        class CacheCursor:
253
            def __init__(self, cached_result): self.__dict__ = cached_result
254
            
255
            def execute(self, *args, **kw_args):
256
                if isinstance(self.result, Exception): raise self.result
257
                # otherwise, result is a rows list
258
                self.iter = iter(self.result)
259
            
260
            def fetchone(self):
261
                try: return self.iter.next()
262
                except StopIteration: return None
263
    
264
    def esc_value(self, value):
265
        module = util.root_module(self.db)
266
        if module == 'psycopg2': str_ = self.db.cursor().mogrify('%s', [value])
267
        elif module == 'MySQLdb':
268
            import _mysql
269
            str_ = _mysql.escape_string(value)
270
        else: raise NotImplementedError("Can't escape value for "+module
271
            +' database')
272
        return strings.to_unicode(str_)
273
    
274
    def esc_name(self, name): return esc_name(self, name) # calls global func
275
    
276
    def run_query(self, query, params=None, cacheable=False, log_level=2,
277
        debug_msg_ref=None):
278
        '''
279
        @param log_ignore_excs The log_level will be increased by 2 if the query
280
            throws one of these exceptions.
281
        '''
282
        assert query != None
283
        
284
        if not self.caching: cacheable = False
285
        used_cache = False
286
        try:
287
            # Get cursor
288
            if cacheable:
289
                query_lookup = _query_lookup(query, params)
290
                try:
291
                    cur = self.query_results[query_lookup]
292
                    used_cache = True
293
                except KeyError: cur = self.DbCursor(self)
294
            else: cur = self.db.cursor()
295
            
296
            # Run query
297
            cur.execute(query, params)
298
        finally:
299
            if self.debug and debug_msg_ref != None:# only compute msg if needed
300
                if used_cache: cache_status = 'Cache hit'
301
                elif cacheable: cache_status = 'Cache miss'
302
                else: cache_status = 'Non-cacheable'
303
                debug_msg_ref[0] = cache_status+': '+str(get_cur_query(cur,
304
                    query, params)).rstrip()
305
        
306
        return cur
307
    
308
    def is_cached(self, query, params=None):
309
        return _query_lookup(query, params) in self.query_results
310
    
311
    def with_savepoint(self, func):
312
        savepoint = 'level_'+str(self._savepoint)
313
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
314
        self._savepoint += 1
315
        try: 
316
            try: return_val = func()
317
            finally:
318
                self._savepoint -= 1
319
                assert self._savepoint >= 0
320
        except:
321
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
322
            raise
323
        else:
324
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
325
            self.do_autocommit()
326
            return return_val
327
    
328
    def do_autocommit(self):
329
        '''Autocommits if outside savepoint'''
330
        assert self._savepoint >= 0
331
        if self.autocommit and self._savepoint == 0:
332
            self.log_debug('Autocommiting')
333
            self.db.commit()
334

    
335
connect = DbConn
336

    
337
##### Querying
338

    
339
def run_raw_query(db, *args, **kw_args):
340
    '''For params, see DbConn.run_query()'''
341
    return db.run_query(*args, **kw_args)
342

    
343
def mogrify(db, query, params):
344
    module = util.root_module(db.db)
345
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
346
    else: raise NotImplementedError("Can't mogrify query for "+module+
347
        ' database')
348

    
349
##### Recoverable querying
350

    
351
def with_savepoint(db, func): return db.with_savepoint(func)
352

    
353
def run_query(db, query, params=None, recover=None, cacheable=False,
354
    log_level=2, log_ignore_excs=None, **kw_args):
355
    '''For params, see run_raw_query()'''
356
    if recover == None: recover = False
357
    if log_ignore_excs == None: log_ignore_excs = ()
358
    log_ignore_excs = tuple(log_ignore_excs)
359
    
360
    debug_msg_ref = [None]
361
    try:
362
        try:
363
            def run(): return run_raw_query(db, query, params, cacheable,
364
                log_level, debug_msg_ref, **kw_args)
365
            if recover and not db.is_cached(query, params):
366
                return with_savepoint(db, run)
367
            else: return run() # don't need savepoint if cached
368
        except Exception, e:
369
            if not recover: raise # need savepoint to run index_cols()
370
            msg = exc.str_(e)
371
            
372
            match = re.search(r'duplicate key value violates unique constraint '
373
                r'"((_?[^\W_]+)_[^"]+?)"', msg)
374
            if match:
375
                constraint, table = match.groups()
376
                try: cols = index_cols(db, table, constraint)
377
                except NotImplementedError: raise e
378
                else: raise DuplicateKeyException(constraint, cols, e)
379
            
380
            match = re.search(r'null value in column "(\w+?)" violates not-null'
381
                r' constraint', msg)
382
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
383
            
384
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
385
                r'|date/time field value out of range): "(.+?)"\n'
386
                r'(?:(?s).*?)\bfunction "(\w+?)".*?\bat assignment', msg)
387
            if match:
388
                value, name = match.groups()
389
                raise FunctionValueException(name, strings.to_unicode(value), e)
390
            
391
            match = re.search(r'relation "(\w+?)" already exists', msg)
392
            if match: raise DuplicateTableException(match.group(1), e)
393
            
394
            match = re.search(r'function "(\w+?)" already exists', msg)
395
            if match: raise DuplicateFunctionException(match.group(1), e)
396
            
397
            raise # no specific exception raised
398
    except log_ignore_excs:
399
        log_level += 2
400
        raise
401
    finally:
402
        if debug_msg_ref[0] != None: db.log_debug(debug_msg_ref[0], log_level)
403

    
404
##### Basic queries
405

    
406
def next_version(name):
407
    '''Prepends the version # so it won't be removed if the name is truncated'''
408
    version = 1 # first existing name was version 0
409
    match = re.match(r'^v(\d+)_(.*)$', name)
410
    if match:
411
        version = int(match.group(1))+1
412
        name = match.group(2)
413
    return 'v'+str(version)+'_'+name
414

    
415
def run_query_into(db, query, params, into=None, *args, **kw_args):
416
    '''Outputs a query to a temp table.
417
    For params, see run_query().
418
    '''
419
    if into == None: return run_query(db, query, params, *args, **kw_args)
420
    else: # place rows in temp table
421
        assert isinstance(into, sql_gen.Table)
422
        
423
        kw_args['recover'] = True
424
        kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
425
        
426
        temp = not db.debug # tables are created as permanent in debug mode
427
        # "temporary tables cannot specify a schema name", so remove schema
428
        if temp: into.schema = None
429
        
430
        while True:
431
            try:
432
                create_query = 'CREATE'
433
                if temp: create_query += ' TEMP'
434
                create_query += ' TABLE '+into.to_str(db)+' AS '+query
435
                
436
                return run_query(db, create_query, params, *args, **kw_args)
437
                    # CREATE TABLE AS sets rowcount to # rows in query
438
            except DuplicateTableException, e:
439
                into.name = next_version(into.name)
440
                # try again with next version of name
441

    
442
order_by_pkey = object() # tells mk_select() to order by the pkey
443

    
444
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
445

    
446
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
447
    start=None, order_by=order_by_pkey, default_table=None):
448
    '''
449
    @param tables The single table to select from, or a list of tables to join
450
        together, with tables after the first being sql_gen.Join objects
451
    @param fields Use None to select all fields in the table
452
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
453
        * container can be any iterable type
454
        * compare_left_side: sql_gen.Code|str (for col name)
455
        * compare_right_side: sql_gen.ValueCond|literal value
456
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
457
        use all columns
458
    @return tuple(query, params)
459
    '''
460
    # Parse tables param
461
    if not lists.is_seq(tables): tables = [tables]
462
    tables = list(tables) # don't modify input! (list() copies input)
463
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
464
    
465
    # Parse other params
466
    if conds == None: conds = []
467
    elif isinstance(conds, dict): conds = conds.items()
468
    conds = list(conds) # don't modify input! (list() copies input)
469
    assert limit == None or type(limit) == int
470
    assert start == None or type(start) == int
471
    if order_by is order_by_pkey:
472
        if distinct_on != []: order_by = None
473
        else: order_by = pkey(db, table0, recover=True)
474
    
475
    query = 'SELECT'
476
    
477
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
478
    
479
    # DISTINCT ON columns
480
    if distinct_on != []:
481
        query += ' DISTINCT'
482
        if distinct_on is not distinct_on_all:
483
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
484
    
485
    # Columns
486
    query += ' '
487
    if fields == None: query += '*'
488
    else: query += ', '.join(map(parse_col, fields))
489
    
490
    # Main table
491
    query += ' FROM '+table0.to_str(db)
492
    
493
    # Add joins
494
    left_table = table0
495
    for join_ in tables:
496
        table = join_.table
497
        
498
        # Parse special values
499
        if join_.type_ is sql_gen.filter_out: # filter no match
500
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
501
                None))
502
        
503
        query += ' '+join_.to_str(db, left_table)
504
        
505
        left_table = table
506
    
507
    missing = True
508
    if conds != []:
509
        query += ' WHERE '+(' AND '.join(('('+sql_gen.ColValueCond(l, r)
510
            .to_str(db)+')' for l, r in conds)))
511
        missing = False
512
    if order_by != None:
513
        query += ' ORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
514
    if limit != None: query += ' LIMIT '+str(limit); missing = False
515
    if start != None:
516
        if start != 0: query += ' OFFSET '+str(start)
517
        missing = False
518
    if missing: warnings.warn(DbWarning(
519
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
520
    
521
    return (query, [])
522

    
523
def select(db, *args, **kw_args):
524
    '''For params, see mk_select() and run_query()'''
525
    recover = kw_args.pop('recover', None)
526
    cacheable = kw_args.pop('cacheable', True)
527
    log_level = kw_args.pop('log_level', 2)
528
    
529
    query, params = mk_select(db, *args, **kw_args)
530
    return run_query(db, query, params, recover, cacheable, log_level=log_level)
531

    
532
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
533
    returning=None, embeddable=False):
534
    '''
535
    @param returning str|None An inserted column (such as pkey) to return
536
    @param embeddable Whether the query should be embeddable as a nested SELECT.
537
        Warning: If you set this and cacheable=True when the query is run, the
538
        query will be fully cached, not just if it raises an exception.
539
    '''
540
    table = sql_gen.as_Table(table)
541
    if cols == []: cols = None # no cols (all defaults) = unknown col names
542
    if cols != None: cols = [sql_gen.as_Col(v).to_str(db) for v in cols]
543
    if select_query == None: select_query = 'DEFAULT VALUES'
544
    if returning != None: returning = sql_gen.as_Col(returning, table)
545
    
546
    # Build query
547
    query = 'INSERT INTO '+table.to_str(db)
548
    if cols != None: query += ' ('+', '.join(cols)+')'
549
    query += ' '+select_query
550
    
551
    if returning != None:
552
        returning_name = copy.copy(returning)
553
        returning_name.table = None
554
        returning_name = returning_name.to_str(db)
555
        query += ' RETURNING '+returning_name
556
    
557
    if embeddable:
558
        assert returning != None
559
        
560
        # Create function
561
        function_name = '_'.join(['insert', table.name] + cols)
562
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
563
        while True:
564
            try:
565
                func_schema = None
566
                if not db.debug: func_schema = 'pg_temp'
567
                function = sql_gen.Table(function_name, func_schema).to_str(db)
568
                
569
                function_query = '''\
570
CREATE FUNCTION '''+function+'''() RETURNS '''+return_type+'''
571
    LANGUAGE sql
572
    AS $$'''+mogrify(db, query, params)+''';$$;
573
'''
574
                run_query(db, function_query, recover=True, cacheable=True,
575
                    log_ignore_excs=(DuplicateFunctionException,))
576
                break # this version was successful
577
            except DuplicateFunctionException, e:
578
                function_name = next_version(function_name)
579
                # try again with next version of name
580
        
581
        # Return query that uses function
582
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
583
            [returning_name]) # AS clause requires function alias
584
        return mk_select(db, func_table, start=0, order_by=None)
585
    
586
    return (query, params)
587

    
588
def insert_select(db, *args, **kw_args):
589
    '''For params, see mk_insert_select() and run_query_into()
590
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
591
        values in
592
    '''
593
    into = kw_args.pop('into', None)
594
    if into != None: kw_args['embeddable'] = True
595
    recover = kw_args.pop('recover', None)
596
    cacheable = kw_args.pop('cacheable', True)
597
    
598
    query, params = mk_insert_select(db, *args, **kw_args)
599
    return run_query_into(db, query, params, into, recover=recover,
600
        cacheable=cacheable)
601

    
602
default = object() # tells insert() to use the default value for a column
603

    
604
def insert(db, table, row, *args, **kw_args):
605
    '''For params, see insert_select()'''
606
    if lists.is_seq(row): cols = None
607
    else:
608
        cols = row.keys()
609
        row = row.values()
610
    row = list(row) # ensure that "!= []" works
611
    
612
    # Check for special values
613
    labels = []
614
    values = []
615
    for value in row:
616
        if value is default: labels.append('DEFAULT')
617
        else:
618
            labels.append('%s')
619
            values.append(value)
620
    
621
    # Build query
622
    if values != []: query = ' VALUES ('+(', '.join(labels))+')'
623
    else: query = None
624
    
625
    return insert_select(db, table, cols, query, values, *args, **kw_args)
626

    
627
def mk_update(db, table, changes=None, cond=None):
628
    '''
629
    @param changes [(col, new_value),...]
630
        * container can be any iterable type
631
        * col: sql_gen.Code|str (for col name)
632
        * new_value: sql_gen.Code|literal value
633
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
634
    @return str query
635
    '''
636
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
637
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
638
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
639
    if cond != None: query += ' WHERE '+cond.to_str(db)
640
    
641
    return query
642

    
643
def update(db, *args, **kw_args):
644
    '''For params, see mk_update() and run_query()'''
645
    recover = kw_args.pop('recover', None)
646
    
647
    return run_query(db, mk_update(db, *args, **kw_args), [], recover)
648

    
649
def last_insert_id(db):
650
    module = util.root_module(db.db)
651
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
652
    elif module == 'MySQLdb': return db.insert_id()
653
    else: return None
654

    
655
def truncate(db, table, schema='public'):
656
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
657

    
658
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
659
    '''Creates a mapping from original column names (which may have collisions)
660
    to names that will be distinct among the columns' tables.
661
    This is meant to be used for several tables that are being joined together.
662
    @param cols The columns to combine. Duplicates will be removed.
663
    @param into The table for the new columns.
664
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
665
        columns will be included in the mapping even if they are not in cols.
666
        The tables of the provided Col objects will be changed to into, so make
667
        copies of them if you want to keep the original tables.
668
    @param as_items Whether to return a list of dict items instead of a dict
669
    @return dict(orig_col=new_col, ...)
670
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
671
        * new_col: sql_gen.Col(orig_col_name, into)
672
        * All mappings use the into table so its name can easily be
673
          changed for all columns at once
674
    '''
675
    cols = lists.uniqify(cols)
676
    
677
    items = []
678
    for col in preserve:
679
        orig_col = copy.copy(col)
680
        col.table = into
681
        items.append((orig_col, col))
682
    preserve = set(preserve)
683
    for col in cols:
684
        if col not in preserve:
685
            items.append((col, sql_gen.Col(clean_name(str(col)), into)))
686
    
687
    if not as_items: items = dict(items)
688
    return items
689

    
690
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
691
    '''For params, see mk_flatten_mapping()
692
    @return See return value of mk_flatten_mapping()
693
    '''
694
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
695
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
696
    run_query_into(db, *mk_select(db, joins, cols, limit=limit, start=start),
697
        into=into)
698
    return dict(items)
699

    
700
##### Database structure queries
701

    
702
def table_row_count(db, table, recover=None):
703
    return value(run_query(db, *mk_select(db, table, [sql_gen.row_count],
704
        order_by=None, start=0), recover=recover, log_level=3))
705

    
706
def table_cols(db, table, recover=None):
707
    return list(col_names(select(db, table, limit=0, order_by=None,
708
        recover=recover, log_level=4)))
709

    
710
def pkey(db, table, recover=None):
711
    '''Assumed to be first column in table'''
712
    return table_cols(db, table, recover)[0]
713

    
714
not_null_col = 'not_null'
715

    
716
def table_not_null_col(db, table, recover=None):
717
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
718
    if not_null_col in table_cols(db, table, recover): return not_null_col
719
    else: return pkey(db, table, recover)
720

    
721
def index_cols(db, table, index):
722
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
723
    automatically created. When you don't know whether something is a UNIQUE
724
    constraint or a UNIQUE index, use this function.'''
725
    module = util.root_module(db.db)
726
    if module == 'psycopg2':
727
        return list(values(run_query(db, '''\
728
SELECT attname
729
FROM
730
(
731
        SELECT attnum, attname
732
        FROM pg_index
733
        JOIN pg_class index ON index.oid = indexrelid
734
        JOIN pg_class table_ ON table_.oid = indrelid
735
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
736
        WHERE
737
            table_.relname = %(table)s
738
            AND index.relname = %(index)s
739
    UNION
740
        SELECT attnum, attname
741
        FROM
742
        (
743
            SELECT
744
                indrelid
745
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
746
                    AS indkey
747
            FROM pg_index
748
            JOIN pg_class index ON index.oid = indexrelid
749
            JOIN pg_class table_ ON table_.oid = indrelid
750
            WHERE
751
                table_.relname = %(table)s
752
                AND index.relname = %(index)s
753
        ) s
754
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
755
) s
756
ORDER BY attnum
757
''',
758
            {'table': table, 'index': index}, cacheable=True, log_level=4)))
759
    else: raise NotImplementedError("Can't list index columns for "+module+
760
        ' database')
761

    
762
def constraint_cols(db, table, constraint):
763
    module = util.root_module(db.db)
764
    if module == 'psycopg2':
765
        return list(values(run_query(db, '''\
766
SELECT attname
767
FROM pg_constraint
768
JOIN pg_class ON pg_class.oid = conrelid
769
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
770
WHERE
771
    relname = %(table)s
772
    AND conname = %(constraint)s
773
ORDER BY attnum
774
''',
775
            {'table': table, 'constraint': constraint})))
776
    else: raise NotImplementedError("Can't list constraint columns for "+module+
777
        ' database')
778

    
779
row_num_col = '_row_num'
780

    
781
def index_col(db, col):
782
    '''Adds an index on a column if it doesn't already exist.'''
783
    assert sql_gen.is_table_col(col)
784
    
785
    table = col.table
786
    index = sql_gen.as_Table(clean_name(str(col)))
787
    col = sql_gen.to_name_only_col(col)
788
    try: run_query(db, 'CREATE INDEX '+index.to_str(db)+' ON '+table.to_str(db)
789
        +' ('+col.to_str(db)+')', recover=True, cacheable=True, log_level=3)
790
    except DuplicateTableException: pass # index already existed
791

    
792
def index_pkey(db, table, recover=None):
793
    '''Makes the first column in a table the primary key.
794
    @pre The table must not already have a primary key.
795
    '''
796
    table = sql_gen.as_Table(table)
797
    
798
    index = sql_gen.as_Table(table.name+'_pkey')
799
    col = sql_gen.to_name_only_col(pkey(db, table, recover))
800
    run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD CONSTRAINT '
801
        +index.to_str(db)+' PRIMARY KEY('+col.to_str(db)+')', recover=recover,
802
        log_level=3)
803

    
804
def add_row_num(db, table):
805
    '''Adds a row number column to a table. Its name is in row_num_col. It will
806
    be the primary key.'''
807
    table = sql_gen.as_Table(table).to_str(db)
808
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
809
        +' serial NOT NULL PRIMARY KEY', log_level=3)
810

    
811
def tables(db, schema='public', table_like='%'):
812
    module = util.root_module(db.db)
813
    params = {'schema': schema, 'table_like': table_like}
814
    if module == 'psycopg2':
815
        return values(run_query(db, '''\
816
SELECT tablename
817
FROM pg_tables
818
WHERE
819
    schemaname = %(schema)s
820
    AND tablename LIKE %(table_like)s
821
ORDER BY tablename
822
''',
823
            params, cacheable=True))
824
    elif module == 'MySQLdb':
825
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
826
            cacheable=True))
827
    else: raise NotImplementedError("Can't list tables for "+module+' database')
828

    
829
##### Database management
830

    
831
def empty_db(db, schema='public', **kw_args):
832
    '''For kw_args, see tables()'''
833
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
834

    
835
##### Heuristic queries
836

    
837
def put(db, table, row, pkey_=None, row_ct_ref=None):
838
    '''Recovers from errors.
839
    Only works under PostgreSQL (uses INSERT RETURNING).
840
    '''
841
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
842
    
843
    try:
844
        cur = insert(db, table, row, pkey_, recover=True)
845
        if row_ct_ref != None and cur.rowcount >= 0:
846
            row_ct_ref[0] += cur.rowcount
847
        return value(cur)
848
    except DuplicateKeyException, e:
849
        return value(select(db, table, [pkey_],
850
            util.dict_subset_right_join(row, e.cols), recover=True))
851

    
852
def get(db, table, row, pkey, row_ct_ref=None, create=False):
853
    '''Recovers from errors'''
854
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
855
    except StopIteration:
856
        if not create: raise
857
        return put(db, table, row, pkey, row_ct_ref) # insert new row
858

    
859
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None):
860
    '''Recovers from errors.
861
    Only works under PostgreSQL (uses INSERT RETURNING).
862
    @param in_tables The main input table to select from, followed by a list of
863
        tables to join with it using the main input table's pkey
864
    @param mapping dict(out_table_col=in_table_col, ...)
865
        * out_table_col: sql_gen.Col|str
866
        * in_table_col: sql_gen.Col Wrap literal values in a sql_gen.NamedCol
867
    @return sql_gen.Col Where the output pkeys are made available
868
    '''
869
    out_table = sql_gen.as_Table(out_table)
870
    for in_table_col in mapping.itervalues():
871
        assert isinstance(in_table_col, sql_gen.Col)
872
    
873
    def log_debug(msg): db.log_debug(msg, level=1.5)
874
    
875
    log_debug('Putting columns: '+str(mapping))
876
    
877
    temp_prefix = out_table.name
878
    pkeys = sql_gen.Table(temp_prefix+'_pkeys')
879
    
880
    # Create input joins from list of input tables
881
    in_tables_ = in_tables[:] # don't modify input!
882
    in_tables0 = in_tables_.pop(0) # first table is separate
883
    in_pkey = pkey(db, in_tables0, recover=True)
884
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
885
    input_joins = [in_tables0]+[sql_gen.Join(v,
886
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
887
    
888
    log_debug('Joining together input tables')
889
    # Place in new table for speed and so don't modify input if values edited
890
    in_table = sql_gen.Table(temp_prefix+'_in')
891
    flatten_cols = filter(sql_gen.is_table_col, mapping.values())
892
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins,
893
        flatten_cols, preserve=[in_pkey_col], start=0))
894
    input_joins = [in_table]
895
    
896
    out_pkey = pkey(db, out_table, recover=True)
897
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
898
    
899
    pkeys_names = [in_pkey, out_pkey]
900
    pkeys_cols = [in_pkey_col, out_pkey_col]
901
    
902
    pkeys_table_exists_ref = [False]
903
    def insert_into_pkeys(joins, cols):
904
        query, params = mk_select(db, joins, cols, order_by=None, start=0)
905
        if pkeys_table_exists_ref[0]:
906
            insert_select(db, pkeys, pkeys_names, query, params)
907
        else:
908
            run_query_into(db, query, params, into=pkeys)
909
            pkeys_table_exists_ref[0] = True
910
    
911
    limit_ref = [None]
912
    conds = set()
913
    distinct_on = []
914
    def mk_main_select(joins, cols):
915
        return mk_select(db, joins, cols, conds, distinct_on,
916
            limit=limit_ref[0], start=0)
917
    
918
    def log_exc(e):
919
        log_debug('Caught exception: '+exc.str_(e, first_line_only=True))
920
    def remove_all_rows():
921
        log_debug('Returning NULL for all rows')
922
        limit_ref[0] = 0 # just create an empty pkeys table
923
    def ignore(in_col, value):
924
        in_col_str = str(in_col)
925
        log_debug('Adding index on '+in_col_str+' to enable fast filtering')
926
        index_col(db, in_col)
927
        log_debug('Ignoring rows with '+in_col_str+' = '+repr(value))
928
    def remove_rows(in_col, value):
929
        ignore(in_col, value)
930
        cond = (in_col, sql_gen.CompareCond(value, '!='))
931
        assert cond not in conds # avoid infinite loops
932
        conds.add(cond)
933
    def invalid2null(in_col, value):
934
        ignore(in_col, value)
935
        update(db, in_table, [(in_col, None)],
936
            sql_gen.ColValueCond(in_col, value))
937
    
938
    # Do inserts and selects
939
    join_cols = {}
940
    insert_out_pkeys = sql_gen.Table(temp_prefix+'_insert_out_pkeys')
941
    insert_in_pkeys = sql_gen.Table(temp_prefix+'_insert_in_pkeys')
942
    while True:
943
        has_joins = join_cols != {}
944
        
945
        # Prepare to insert new rows
946
        insert_joins = input_joins[:] # don't modify original!
947
        insert_args = dict(recover=True, cacheable=False)
948
        if has_joins:
949
            distinct_on = [v.to_Col() for v in join_cols.values()]
950
            insert_joins.append(sql_gen.Join(out_table, join_cols,
951
                sql_gen.filter_out))
952
        else:
953
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
954
        
955
        log_debug('Inserting new rows')
956
        try:
957
            cur = insert_select(db, out_table, mapping.keys(),
958
                *mk_main_select(insert_joins, mapping.values()), **insert_args)
959
            break # insert successful
960
        except DuplicateKeyException, e:
961
            log_exc(e)
962
            
963
            old_join_cols = join_cols.copy()
964
            join_cols.update(util.dict_subset(mapping, e.cols))
965
            log_debug('Ignoring existing rows, comparing on '+str(join_cols))
966
            assert join_cols != old_join_cols # avoid infinite loops
967
        except NullValueException, e:
968
            log_exc(e)
969
            
970
            out_col, = e.cols
971
            try: in_col = mapping[out_col]
972
            except KeyError:
973
                log_debug('Missing mapping for NOT NULL '+out_col)
974
                remove_all_rows()
975
            else: remove_rows(in_col, None)
976
        except FunctionValueException, e:
977
            log_exc(e)
978
            
979
            assert e.name == out_table.name
980
            out_col = 'value' # assume function param was named "value"
981
            invalid2null(mapping[out_col], e.value)
982
        except DatabaseErrors, e:
983
            log_exc(e)
984
            
985
            msg = 'No handler for exception: '+exc.str_(e, first_line_only=True)
986
            warnings.warn(DbWarning(msg))
987
            log_debug(msg)
988
            remove_all_rows()
989
        # after exception handled, rerun loop with additional constraints
990
    
991
    if row_ct_ref != None and cur.rowcount >= 0:
992
        row_ct_ref[0] += cur.rowcount
993
    
994
    if has_joins:
995
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
996
        log_debug('Getting output pkeys of existing/inserted rows')
997
        insert_into_pkeys(select_joins, pkeys_cols)
998
    else:
999
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1000
        
1001
        log_debug('Getting input pkeys for rows in insert')
1002
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
1003
            into=insert_in_pkeys)
1004
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1005
        
1006
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1007
            insert_in_pkeys)
1008
        
1009
        log_debug('Joining together output and input pkeys')
1010
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1011
            {row_num_col: sql_gen.join_same_not_null})]
1012
        insert_into_pkeys(pkey_joins, pkeys_names)
1013
    
1014
    log_debug('Adding pkey on returned pkeys table to enable fast joins')
1015
    index_pkey(db, pkeys)
1016
    
1017
    log_debug("Setting missing rows' pkeys to NULL")
1018
    missing_rows_joins = input_joins+[sql_gen.Join(pkeys,
1019
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1020
        # must use join_same_not_null or query will take forever
1021
    insert_into_pkeys(missing_rows_joins,
1022
        [in_pkey_col, sql_gen.NamedCol(out_pkey, None)])
1023
    
1024
    assert table_row_count(db, pkeys) == table_row_count(db, in_table)
1025
    
1026
    return sql_gen.Col(out_pkey, pkeys)
1027

    
1028
##### Data cleanup
1029

    
1030
def cleanup_table(db, table, cols):
1031
    def esc_name_(name): return esc_name(db, name)
1032
    
1033
    table = sql_gen.as_Table(table).to_str(db)
1034
    cols = map(esc_name_, cols)
1035
    
1036
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
1037
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
1038
            for col in cols))),
1039
        dict(null0='', null1=r'\N'))
(23-23/35)