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# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
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    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
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        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62

    
63
class NameException(DbException): pass
64

    
65
class DuplicateKeyException(ConstraintException): pass
66

    
67
class NullValueException(ConstraintException): pass
68

    
69
class FunctionValueException(ExceptionWithNameValue): pass
70

    
71
class DuplicateTableException(ExceptionWithName): pass
72

    
73
class DuplicateFunctionException(ExceptionWithName): pass
74

    
75
class EmptyRowException(DbException): pass
76

    
77
##### Warnings
78

    
79
class DbWarning(UserWarning): pass
80

    
81
##### Result retrieval
82

    
83
def col_names(cur): return (col[0] for col in cur.description)
84

    
85
def rows(cur): return iter(lambda: cur.fetchone(), None)
86

    
87
def consume_rows(cur):
88
    '''Used to fetch all rows so result will be cached'''
89
    iters.consume_iter(rows(cur))
90

    
91
def next_row(cur): return rows(cur).next()
92

    
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
96
    return row_
97

    
98
def next_value(cur): return next_row(cur)[0]
99

    
100
def value(cur): return row(cur)[0]
101

    
102
def values(cur): return iters.func_iter(lambda: next_value(cur))
103

    
104
def value_or_none(cur):
105
    try: return value(cur)
106
    except StopIteration: return None
107

    
108
##### Input validation
109

    
110
def esc_name_by_module(module, name):
111
    if module == 'psycopg2' or module == None: quote = '"'
112
    elif module == 'MySQLdb': quote = '`'
113
    else: raise NotImplementedError("Can't escape name for "+module+' database')
114
    return sql_gen.esc_name(name, quote)
115

    
116
def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
118

    
119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
121

    
122
def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
127

    
128
##### Database connections
129

    
130
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
131

    
132
db_engines = {
133
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
134
    'PostgreSQL': ('psycopg2', {}),
135
}
136

    
137
DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
139

    
140
def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144

    
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
147

    
148
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
149

    
150
log_debug_none = lambda msg, level=2: None
151

    
152
class DbConn:
153
    def __init__(self, db_config, serializable=True, autocommit=False,
154
        caching=True, log_debug=log_debug_none):
155
        self.db_config = db_config
156
        self.serializable = serializable
157
        self.autocommit = autocommit
158
        self.caching = caching
159
        self.log_debug = log_debug
160
        self.debug = log_debug != log_debug_none
161
        
162
        self.__db = None
163
        self.query_results = {}
164
        self._savepoint = 0
165
    
166
    def __getattr__(self, name):
167
        if name == '__dict__': raise Exception('getting __dict__')
168
        if name == 'db': return self._db()
169
        else: raise AttributeError()
170
    
171
    def __getstate__(self):
172
        state = copy.copy(self.__dict__) # shallow copy
173
        state['log_debug'] = None # don't pickle the debug callback
174
        state['_DbConn__db'] = None # don't pickle the connection
175
        return state
176
    
177
    def connected(self): return self.__db != None
178
    
179
    def _db(self):
180
        if self.__db == None:
181
            # Process db_config
182
            db_config = self.db_config.copy() # don't modify input!
183
            schemas = db_config.pop('schemas', None)
184
            module_name, mappings = db_engines[db_config.pop('engine')]
185
            module = __import__(module_name)
186
            _add_module(module)
187
            for orig, new in mappings.iteritems():
188
                try: util.rename_key(db_config, orig, new)
189
                except KeyError: pass
190
            
191
            # Connect
192
            self.__db = module.connect(**db_config)
193
            
194
            # Configure connection
195
            if self.serializable and not self.autocommit: run_raw_query(self,
196
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
197
            if schemas != None:
198
                schemas_ = ''.join((esc_name(self, s)+', '
199
                    for s in schemas.split(',')))
200
                run_raw_query(self, "SELECT set_config('search_path', \
201
%s || current_setting('search_path'), false)", [schemas_])
202
        
203
        return self.__db
204
    
205
    class DbCursor(Proxy):
206
        def __init__(self, outer):
207
            Proxy.__init__(self, outer.db.cursor())
208
            self.outer = outer
209
            self.query_results = outer.query_results
210
            self.query_lookup = None
211
            self.result = []
212
        
213
        def execute(self, query, params=None):
214
            self._is_insert = query.upper().find('INSERT') >= 0
215
            self.query_lookup = _query_lookup(query, params)
216
            try:
217
                try:
218
                    return_value = self.inner.execute(query, params)
219
                    self.outer.do_autocommit()
220
                finally: self.query = get_cur_query(self.inner)
221
            except Exception, e:
222
                _add_cursor_info(e, self, query, params)
223
                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
226
            # Fetch all rows so result will be cached
227
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
228
            return return_value
229
        
230
        def fetchone(self):
231
            row = self.inner.fetchone()
232
            if row != None: self.result.append(row)
233
            # otherwise, fetched all rows
234
            else: self._cache_result()
235
            return row
236
        
237
        def _cache_result(self):
238
            # For inserts, only cache exceptions since inserts are not
239
            # idempotent, but an invalid insert will always be invalid
240
            if self.query_results != None and (not self._is_insert
241
                or isinstance(self.result, Exception)):
242
                
243
                assert self.query_lookup != None
244
                self.query_results[self.query_lookup] = self.CacheCursor(
245
                    util.dict_subset(dicts.AttrsDictView(self),
246
                    ['query', 'result', 'rowcount', 'description']))
247
        
248
        class CacheCursor:
249
            def __init__(self, cached_result): self.__dict__ = cached_result
250
            
251
            def execute(self, *args, **kw_args):
252
                if isinstance(self.result, Exception): raise self.result
253
                # otherwise, result is a rows list
254
                self.iter = iter(self.result)
255
            
256
            def fetchone(self):
257
                try: return self.iter.next()
258
                except StopIteration: return None
259
    
260
    def esc_value(self, value):
261
        module = util.root_module(self.db)
262
        if module == 'psycopg2': str_ = self.db.cursor().mogrify('%s', [value])
263
        elif module == 'MySQLdb':
264
            import _mysql
265
            str_ = _mysql.escape_string(value)
266
        else: raise NotImplementedError("Can't escape value for "+module
267
            +' database')
268
        return strings.to_unicode(str_)
269
    
270
    def esc_name(self, name): return esc_name(self, name) # calls global func
271
    
272
    def run_query(self, query, params=None, cacheable=False, log_level=2,
273
        debug_msg_ref=None):
274
        '''
275
        @param log_ignore_excs The log_level will be increased by 2 if the query
276
            throws one of these exceptions.
277
        '''
278
        assert query != None
279
        
280
        if not self.caching: cacheable = False
281
        used_cache = False
282
        try:
283
            # Get cursor
284
            if cacheable:
285
                query_lookup = _query_lookup(query, params)
286
                try:
287
                    cur = self.query_results[query_lookup]
288
                    used_cache = True
289
                except KeyError: cur = self.DbCursor(self)
290
            else: cur = self.db.cursor()
291
            
292
            # Run query
293
            cur.execute(query, params)
294
        finally:
295
            if self.debug and debug_msg_ref != None:# only compute msg if needed
296
                if used_cache: cache_status = 'cache hit'
297
                elif cacheable: cache_status = 'cache miss'
298
                else: cache_status = 'non-cacheable'
299
                query_code = strings.as_code(str(get_cur_query(cur, query,
300
                    params)), 'SQL')
301
                debug_msg_ref[0] = 'DB query: '+cache_status+':\n'+query_code
302
        
303
        return cur
304
    
305
    def is_cached(self, query, params=None):
306
        return _query_lookup(query, params) in self.query_results
307
    
308
    def with_savepoint(self, func):
309
        savepoint = 'level_'+str(self._savepoint)
310
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
311
        self._savepoint += 1
312
        try: 
313
            try: return_val = func()
314
            finally:
315
                self._savepoint -= 1
316
                assert self._savepoint >= 0
317
        except:
318
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
319
            raise
320
        else:
321
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
322
            self.do_autocommit()
323
            return return_val
324
    
325
    def do_autocommit(self):
326
        '''Autocommits if outside savepoint'''
327
        assert self._savepoint >= 0
328
        if self.autocommit and self._savepoint == 0:
329
            self.log_debug('Autocommiting')
330
            self.db.commit()
331

    
332
connect = DbConn
333

    
334
##### Querying
335

    
336
def run_raw_query(db, *args, **kw_args):
337
    '''For params, see DbConn.run_query()'''
338
    return db.run_query(*args, **kw_args)
339

    
340
def mogrify(db, query, params):
341
    module = util.root_module(db.db)
342
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
343
    else: raise NotImplementedError("Can't mogrify query for "+module+
344
        ' database')
345

    
346
##### Recoverable querying
347

    
348
def with_savepoint(db, func): return db.with_savepoint(func)
349

    
350
def run_query(db, query, params=None, recover=None, cacheable=False,
351
    log_level=2, log_ignore_excs=None, **kw_args):
352
    '''For params, see run_raw_query()'''
353
    if recover == None: recover = False
354
    if log_ignore_excs == None: log_ignore_excs = ()
355
    log_ignore_excs = tuple(log_ignore_excs)
356
    
357
    debug_msg_ref = [None]
358
    try:
359
        try:
360
            def run(): return run_raw_query(db, query, params, cacheable,
361
                log_level, debug_msg_ref, **kw_args)
362
            if recover and not db.is_cached(query, params):
363
                return with_savepoint(db, run)
364
            else: return run() # don't need savepoint if cached
365
        except Exception, e:
366
            if not recover: raise # need savepoint to run index_cols()
367
            msg = exc.str_(e)
368
            
369
            match = re.search(r'duplicate key value violates unique constraint '
370
                r'"((_?[^\W_]+)_.+?)"', msg)
371
            if match:
372
                constraint, table = match.groups()
373
                try: cols = index_cols(db, table, constraint)
374
                except NotImplementedError: raise e
375
                else: raise DuplicateKeyException(constraint, cols, e)
376
            
377
            match = re.search(r'null value in column "(.+?)" violates not-null'
378
                r' constraint', msg)
379
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
380
            
381
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
382
                r'|date/time field value out of range): "(.+?)"\n'
383
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
384
            if match:
385
                value, name = match.groups()
386
                raise FunctionValueException(name, strings.to_unicode(value), e)
387
            
388
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
389
                r'is of type', msg)
390
            if match:
391
                col, type_ = match.groups()
392
                raise MissingCastException(type_, col, e)
393
            
394
            match = re.search(r'relation "(.+?)" already exists', msg)
395
            if match: raise DuplicateTableException(match.group(1), e)
396
            
397
            match = re.search(r'function "(.+?)" already exists', msg)
398
            if match: raise DuplicateFunctionException(match.group(1), e)
399
            
400
            raise # no specific exception raised
401
    except log_ignore_excs:
402
        log_level += 2
403
        raise
404
    finally:
405
        if debug_msg_ref[0] != None: db.log_debug(debug_msg_ref[0], log_level)
406

    
407
##### Basic queries
408

    
409
def next_version(name):
410
    '''Prepends the version # so it won't be removed if the name is truncated'''
411
    version = 1 # first existing name was version 0
412
    match = re.match(r'^#(\d+)-(.*)$', name)
413
    if match:
414
        version = int(match.group(1))+1
415
        name = match.group(2)
416
    return '#'+str(version)+'-'+name
417

    
418
def run_query_into(db, query, params, into=None, *args, **kw_args):
419
    '''Outputs a query to a temp table.
420
    For params, see run_query().
421
    '''
422
    if into == None: return run_query(db, query, params, *args, **kw_args)
423
    else: # place rows in temp table
424
        assert isinstance(into, sql_gen.Table)
425
        
426
        kw_args['recover'] = True
427
        kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
428
        
429
        temp = not db.autocommit # tables are permanent in autocommit mode
430
        # "temporary tables cannot specify a schema name", so remove schema
431
        if temp: into.schema = None
432
        
433
        while True:
434
            try:
435
                create_query = 'CREATE'
436
                if temp: create_query += ' TEMP'
437
                create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
438
                
439
                return run_query(db, create_query, params, *args, **kw_args)
440
                    # CREATE TABLE AS sets rowcount to # rows in query
441
            except DuplicateTableException, e:
442
                into.name = next_version(into.name)
443
                # try again with next version of name
444

    
445
order_by_pkey = object() # tells mk_select() to order by the pkey
446

    
447
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
448

    
449
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
450
    start=None, order_by=order_by_pkey, default_table=None):
451
    '''
452
    @param tables The single table to select from, or a list of tables to join
453
        together, with tables after the first being sql_gen.Join objects
454
    @param fields Use None to select all fields in the table
455
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
456
        * container can be any iterable type
457
        * compare_left_side: sql_gen.Code|str (for col name)
458
        * compare_right_side: sql_gen.ValueCond|literal value
459
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
460
        use all columns
461
    @return tuple(query, params)
462
    '''
463
    # Parse tables param
464
    if not lists.is_seq(tables): tables = [tables]
465
    tables = list(tables) # don't modify input! (list() copies input)
466
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
467
    
468
    # Parse other params
469
    if conds == None: conds = []
470
    elif isinstance(conds, dict): conds = conds.items()
471
    conds = list(conds) # don't modify input! (list() copies input)
472
    assert limit == None or type(limit) == int
473
    assert start == None or type(start) == int
474
    if order_by is order_by_pkey:
475
        if distinct_on != []: order_by = None
476
        else: order_by = pkey(db, table0, recover=True)
477
    
478
    query = 'SELECT'
479
    
480
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
481
    
482
    # DISTINCT ON columns
483
    if distinct_on != []:
484
        query += '\nDISTINCT'
485
        if distinct_on is not distinct_on_all:
486
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
487
    
488
    # Columns
489
    query += '\n'
490
    if fields == None: query += '*'
491
    else: query += '\n, '.join(map(parse_col, fields))
492
    
493
    # Main table
494
    query += '\nFROM '+table0.to_str(db)
495
    
496
    # Add joins
497
    left_table = table0
498
    for join_ in tables:
499
        table = join_.table
500
        
501
        # Parse special values
502
        if join_.type_ is sql_gen.filter_out: # filter no match
503
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
504
                None))
505
        
506
        query += '\n'+join_.to_str(db, left_table)
507
        
508
        left_table = table
509
    
510
    missing = True
511
    if conds != []:
512
        query += '\nWHERE\n'+('\nAND\n'.join(('('+sql_gen.ColValueCond(l, r)
513
            .to_str(db)+')' for l, r in conds)))
514
        missing = False
515
    if order_by != None:
516
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
517
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
518
    if start != None:
519
        if start != 0: query += '\nOFFSET '+str(start)
520
        missing = False
521
    if missing: warnings.warn(DbWarning(
522
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
523
    
524
    return (query, [])
525

    
526
def select(db, *args, **kw_args):
527
    '''For params, see mk_select() and run_query()'''
528
    recover = kw_args.pop('recover', None)
529
    cacheable = kw_args.pop('cacheable', True)
530
    log_level = kw_args.pop('log_level', 2)
531
    
532
    query, params = mk_select(db, *args, **kw_args)
533
    return run_query(db, query, params, recover, cacheable, log_level=log_level)
534

    
535
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
536
    returning=None, embeddable=False):
537
    '''
538
    @param returning str|None An inserted column (such as pkey) to return
539
    @param embeddable Whether the query should be embeddable as a nested SELECT.
540
        Warning: If you set this and cacheable=True when the query is run, the
541
        query will be fully cached, not just if it raises an exception.
542
    '''
543
    table = sql_gen.as_Table(table)
544
    if cols == []: cols = None # no cols (all defaults) = unknown col names
545
    if cols != None: cols = [sql_gen.as_Col(v).to_str(db) for v in cols]
546
    if select_query == None: select_query = 'DEFAULT VALUES'
547
    if returning != None: returning = sql_gen.as_Col(returning, table)
548
    
549
    # Build query
550
    first_line = 'INSERT INTO '+table.to_str(db)
551
    query = first_line
552
    if cols != None: query += '\n('+', '.join(cols)+')'
553
    query += '\n'+select_query
554
    
555
    if returning != None:
556
        returning_name = copy.copy(returning)
557
        returning_name.table = None
558
        returning_name = returning_name.to_str(db)
559
        query += '\nRETURNING '+returning_name
560
    
561
    if embeddable:
562
        assert returning != None
563
        
564
        # Create function
565
        function_name = sql_gen.clean_name(first_line)
566
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
567
        while True:
568
            try:
569
                func_schema = None
570
                if not db.autocommit: func_schema = 'pg_temp'
571
                function = sql_gen.Table(function_name, func_schema).to_str(db)
572
                
573
                function_query = '''\
574
CREATE FUNCTION '''+function+'''()
575
RETURNS '''+return_type+'''
576
LANGUAGE sql
577
AS $$
578
'''+mogrify(db, query, params)+''';
579
$$;
580
'''
581
                run_query(db, function_query, recover=True, cacheable=True,
582
                    log_ignore_excs=(DuplicateFunctionException,))
583
                break # this version was successful
584
            except DuplicateFunctionException, e:
585
                function_name = next_version(function_name)
586
                # try again with next version of name
587
        
588
        # Return query that uses function
589
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
590
            [returning_name]) # AS clause requires function alias
591
        return mk_select(db, func_table, start=0, order_by=None)
592
    
593
    return (query, params)
594

    
595
def insert_select(db, *args, **kw_args):
596
    '''For params, see mk_insert_select() and run_query_into()
597
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
598
        values in
599
    '''
600
    into = kw_args.pop('into', None)
601
    if into != None: kw_args['embeddable'] = True
602
    recover = kw_args.pop('recover', None)
603
    cacheable = kw_args.pop('cacheable', True)
604
    
605
    query, params = mk_insert_select(db, *args, **kw_args)
606
    return run_query_into(db, query, params, into, recover=recover,
607
        cacheable=cacheable)
608

    
609
default = object() # tells insert() to use the default value for a column
610

    
611
def insert(db, table, row, *args, **kw_args):
612
    '''For params, see insert_select()'''
613
    if lists.is_seq(row): cols = None
614
    else:
615
        cols = row.keys()
616
        row = row.values()
617
    row = list(row) # ensure that "!= []" works
618
    
619
    # Check for special values
620
    labels = []
621
    values = []
622
    for value in row:
623
        if value is default: labels.append('DEFAULT')
624
        else:
625
            labels.append('%s')
626
            values.append(value)
627
    
628
    # Build query
629
    if values != []: query = 'VALUES ('+(', '.join(labels))+')'
630
    else: query = None
631
    
632
    return insert_select(db, table, cols, query, values, *args, **kw_args)
633

    
634
def mk_update(db, table, changes=None, cond=None):
635
    '''
636
    @param changes [(col, new_value),...]
637
        * container can be any iterable type
638
        * col: sql_gen.Code|str (for col name)
639
        * new_value: sql_gen.Code|literal value
640
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
641
    @return str query
642
    '''
643
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
644
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
645
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
646
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
647
    
648
    return query
649

    
650
def update(db, *args, **kw_args):
651
    '''For params, see mk_update() and run_query()'''
652
    recover = kw_args.pop('recover', None)
653
    
654
    return run_query(db, mk_update(db, *args, **kw_args), [], recover)
655

    
656
def last_insert_id(db):
657
    module = util.root_module(db.db)
658
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
659
    elif module == 'MySQLdb': return db.insert_id()
660
    else: return None
661

    
662
def truncate(db, table, schema='public'):
663
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
664

    
665
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
666
    '''Creates a mapping from original column names (which may have collisions)
667
    to names that will be distinct among the columns' tables.
668
    This is meant to be used for several tables that are being joined together.
669
    @param cols The columns to combine. Duplicates will be removed.
670
    @param into The table for the new columns.
671
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
672
        columns will be included in the mapping even if they are not in cols.
673
        The tables of the provided Col objects will be changed to into, so make
674
        copies of them if you want to keep the original tables.
675
    @param as_items Whether to return a list of dict items instead of a dict
676
    @return dict(orig_col=new_col, ...)
677
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
678
        * new_col: sql_gen.Col(orig_col_name, into)
679
        * All mappings use the into table so its name can easily be
680
          changed for all columns at once
681
    '''
682
    cols = lists.uniqify(cols)
683
    
684
    items = []
685
    for col in preserve:
686
        orig_col = copy.copy(col)
687
        col.table = into
688
        items.append((orig_col, col))
689
    preserve = set(preserve)
690
    for col in cols:
691
        if col not in preserve: items.append((col, sql_gen.Col(str(col), into)))
692
    
693
    if not as_items: items = dict(items)
694
    return items
695

    
696
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
697
    '''For params, see mk_flatten_mapping()
698
    @return See return value of mk_flatten_mapping()
699
    '''
700
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
701
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
702
    run_query_into(db, *mk_select(db, joins, cols, limit=limit, start=start),
703
        into=into)
704
    return dict(items)
705

    
706
##### Database structure queries
707

    
708
def table_row_count(db, table, recover=None):
709
    return value(run_query(db, *mk_select(db, table, [sql_gen.row_count],
710
        order_by=None, start=0), recover=recover, log_level=3))
711

    
712
def table_cols(db, table, recover=None):
713
    return list(col_names(select(db, table, limit=0, order_by=None,
714
        recover=recover, log_level=4)))
715

    
716
def pkey(db, table, recover=None):
717
    '''Assumed to be first column in table'''
718
    return table_cols(db, table, recover)[0]
719

    
720
not_null_col = 'not_null_col'
721

    
722
def table_not_null_col(db, table, recover=None):
723
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
724
    if not_null_col in table_cols(db, table, recover): return not_null_col
725
    else: return pkey(db, table, recover)
726

    
727
def index_cols(db, table, index):
728
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
729
    automatically created. When you don't know whether something is a UNIQUE
730
    constraint or a UNIQUE index, use this function.'''
731
    module = util.root_module(db.db)
732
    if module == 'psycopg2':
733
        return list(values(run_query(db, '''\
734
SELECT attname
735
FROM
736
(
737
        SELECT attnum, attname
738
        FROM pg_index
739
        JOIN pg_class index ON index.oid = indexrelid
740
        JOIN pg_class table_ ON table_.oid = indrelid
741
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
742
        WHERE
743
            table_.relname = %(table)s
744
            AND index.relname = %(index)s
745
    UNION
746
        SELECT attnum, attname
747
        FROM
748
        (
749
            SELECT
750
                indrelid
751
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
752
                    AS indkey
753
            FROM pg_index
754
            JOIN pg_class index ON index.oid = indexrelid
755
            JOIN pg_class table_ ON table_.oid = indrelid
756
            WHERE
757
                table_.relname = %(table)s
758
                AND index.relname = %(index)s
759
        ) s
760
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
761
) s
762
ORDER BY attnum
763
''',
764
            {'table': table, 'index': index}, cacheable=True, log_level=4)))
765
    else: raise NotImplementedError("Can't list index columns for "+module+
766
        ' database')
767

    
768
def constraint_cols(db, table, constraint):
769
    module = util.root_module(db.db)
770
    if module == 'psycopg2':
771
        return list(values(run_query(db, '''\
772
SELECT attname
773
FROM pg_constraint
774
JOIN pg_class ON pg_class.oid = conrelid
775
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
776
WHERE
777
    relname = %(table)s
778
    AND conname = %(constraint)s
779
ORDER BY attnum
780
''',
781
            {'table': table, 'constraint': constraint})))
782
    else: raise NotImplementedError("Can't list constraint columns for "+module+
783
        ' database')
784

    
785
row_num_col = '_row_num'
786

    
787
def add_index(db, expr):
788
    '''Adds an index on a column or expression if it doesn't already exist.
789
    Currently, only function calls are supported as expressions.
790
    '''
791
    expr = copy.copy(expr) # don't modify input!
792
    
793
    # Extract col
794
    if isinstance(expr, sql_gen.FunctionCall):
795
        col = expr.args[0]
796
        expr = sql_gen.Expr(expr)
797
    else: col = expr
798
    assert sql_gen.is_table_col(col)
799
    
800
    index = sql_gen.as_Table(str(expr))
801
    table = col.table
802
    col.table = None
803
    try: run_query(db, 'CREATE INDEX '+index.to_str(db)+' ON '+table.to_str(db)
804
        +' ('+expr.to_str(db)+')', recover=True, cacheable=True, log_level=3)
805
    except DuplicateTableException: pass # index already existed
806

    
807
def index_pkey(db, table, recover=None):
808
    '''Makes the first column in a table the primary key.
809
    @pre The table must not already have a primary key.
810
    '''
811
    table = sql_gen.as_Table(table)
812
    
813
    index = sql_gen.as_Table(table.name+'_pkey')
814
    col = sql_gen.to_name_only_col(pkey(db, table, recover))
815
    run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD CONSTRAINT '
816
        +index.to_str(db)+' PRIMARY KEY('+col.to_str(db)+')', recover=recover,
817
        log_level=3)
818

    
819
def add_row_num(db, table):
820
    '''Adds a row number column to a table. Its name is in row_num_col. It will
821
    be the primary key.'''
822
    table = sql_gen.as_Table(table).to_str(db)
823
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
824
        +' serial NOT NULL PRIMARY KEY', log_level=3)
825

    
826
def tables(db, schema_like='public', table_like='%'):
827
    module = util.root_module(db.db)
828
    params = {'schema_like': schema_like, 'table_like': table_like}
829
    if module == 'psycopg2':
830
        return values(run_query(db, '''\
831
SELECT tablename
832
FROM pg_tables
833
WHERE
834
    schemaname LIKE %(schema_like)s
835
    AND tablename LIKE %(table_like)s
836
ORDER BY tablename
837
''',
838
            params, cacheable=True))
839
    elif module == 'MySQLdb':
840
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
841
            cacheable=True))
842
    else: raise NotImplementedError("Can't list tables for "+module+' database')
843

    
844
##### Database management
845

    
846
def empty_db(db, schema='public', **kw_args):
847
    '''For kw_args, see tables()'''
848
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
849

    
850
##### Heuristic queries
851

    
852
def put(db, table, row, pkey_=None, row_ct_ref=None):
853
    '''Recovers from errors.
854
    Only works under PostgreSQL (uses INSERT RETURNING).
855
    '''
856
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
857
    
858
    try:
859
        cur = insert(db, table, row, pkey_, recover=True)
860
        if row_ct_ref != None and cur.rowcount >= 0:
861
            row_ct_ref[0] += cur.rowcount
862
        return value(cur)
863
    except DuplicateKeyException, e:
864
        return value(select(db, table, [pkey_],
865
            util.dict_subset_right_join(row, e.cols), recover=True))
866

    
867
def get(db, table, row, pkey, row_ct_ref=None, create=False):
868
    '''Recovers from errors'''
869
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
870
    except StopIteration:
871
        if not create: raise
872
        return put(db, table, row, pkey, row_ct_ref) # insert new row
873

    
874
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
875
    default=None, is_func=False):
876
    '''Recovers from errors.
877
    Only works under PostgreSQL (uses INSERT RETURNING).
878
    @param in_tables The main input table to select from, followed by a list of
879
        tables to join with it using the main input table's pkey
880
    @param mapping dict(out_table_col=in_table_col, ...)
881
        * out_table_col: sql_gen.Col|str
882
        * in_table_col: sql_gen.Col Wrap literal values in a sql_gen.NamedCol
883
    @param into The table to contain the output and input pkeys.
884
        Defaults to `out_table.name+'-pkeys'`.
885
    @param default The *output* column to use as the pkey for missing rows.
886
        If this output column does not exist in the mapping, uses None.
887
    @param is_func Whether out_table is the name of a SQL function, not a table
888
    @return sql_gen.Col Where the output pkeys are made available
889
    '''
890
    out_table = sql_gen.as_Table(out_table)
891
    mapping = sql_gen.ColDict(mapping)
892
    if into == None:
893
        into = out_table.name
894
        if is_func: into += '()'
895
        else: into += '-pkeys'
896
    into = sql_gen.as_Table(into)
897
    
898
    def log_debug(msg): db.log_debug(msg, level=1.5)
899
    def col_ustr(str_):
900
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
901
    
902
    log_debug('********** New iteration **********')
903
    log_debug('Inserting these input columns into '+strings.as_tt(
904
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
905
    
906
    # Create input joins from list of input tables
907
    in_tables_ = in_tables[:] # don't modify input!
908
    in_tables0 = in_tables_.pop(0) # first table is separate
909
    in_pkey = pkey(db, in_tables0, recover=True)
910
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
911
    input_joins = [in_tables0]+[sql_gen.Join(v,
912
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
913
    
914
    log_debug('Joining together input tables into temp table')
915
    # Place in new table for speed and so don't modify input if values edited
916
    in_table = sql_gen.Table(into.name.replace('-pkeys', '')+'-input')
917
    flatten_cols = filter(sql_gen.is_table_col, mapping.values())
918
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins,
919
        flatten_cols, preserve=[in_pkey_col], start=0))
920
    input_joins = [in_table]
921
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
922
    
923
    # Resolve default value column
924
    try: default = mapping[default]
925
    except KeyError:
926
        if default != None:
927
            db.log_debug('Default value column '
928
                +strings.as_tt(strings.repr_no_u(default))
929
                +' does not exist in mapping, falling back to None', level=2.1)
930
            default = None
931
    
932
    out_pkey = pkey(db, out_table, recover=True)
933
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
934
    
935
    pkeys_names = [in_pkey, out_pkey]
936
    pkeys_cols = [in_pkey_col, out_pkey_col]
937
    
938
    pkeys_table_exists_ref = [False]
939
    def insert_into_pkeys(joins, cols):
940
        query, params = mk_select(db, joins, cols, order_by=None, start=0)
941
        if pkeys_table_exists_ref[0]:
942
            insert_select(db, into, pkeys_names, query, params)
943
        else:
944
            run_query_into(db, query, params, into=into)
945
            pkeys_table_exists_ref[0] = True
946
    
947
    limit_ref = [None]
948
    conds = set()
949
    distinct_on = []
950
    def mk_main_select(joins, cols):
951
        return mk_select(db, joins, cols, conds, distinct_on,
952
            limit=limit_ref[0], start=0)
953
    
954
    exc_strs = set()
955
    def log_exc(e):
956
        e_str = exc.str_(e, first_line_only=True)
957
        log_debug('Caught exception: '+e_str)
958
        assert e_str not in exc_strs # avoid infinite loops
959
        exc_strs.add(e_str)
960
    def remove_all_rows():
961
        log_debug('Returning NULL for all rows')
962
        limit_ref[0] = 0 # just create an empty pkeys table
963
    def ignore(in_col, value):
964
        in_col_str = strings.as_tt(repr(in_col))
965
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
966
            level=2.5)
967
        add_index(db, in_col)
968
        log_debug('Ignoring rows with '+in_col_str+' = '
969
            +strings.as_tt(repr(value)))
970
    def remove_rows(in_col, value):
971
        ignore(in_col, value)
972
        cond = (in_col, sql_gen.CompareCond(value, '!='))
973
        assert cond not in conds # avoid infinite loops
974
        conds.add(cond)
975
    def invalid2null(in_col, value):
976
        ignore(in_col, value)
977
        update(db, in_table, [(in_col, None)],
978
            sql_gen.ColValueCond(in_col, value))
979
    
980
    # Do inserts and selects
981
    join_cols = sql_gen.ColDict()
982
    insert_out_pkeys = sql_gen.Table(into.name+'-insert_out_pkeys')
983
    insert_in_pkeys = sql_gen.Table(into.name+'-insert_in_pkeys')
984
    while True:
985
        if limit_ref[0] == 0: # special case
986
            log_debug('Creating an empty pkeys table')
987
            cur = run_query_into(db, *mk_select(db, out_table, [out_pkey],
988
                limit=limit_ref[0]), into=insert_out_pkeys)
989
            break # don't do main case
990
        
991
        has_joins = join_cols != {}
992
        
993
        # Prepare to insert new rows
994
        insert_joins = input_joins[:] # don't modify original!
995
        insert_args = dict(recover=True, cacheable=False)
996
        if has_joins:
997
            distinct_on = [v.to_Col() for v in join_cols.values()]
998
            insert_joins.append(sql_gen.Join(out_table, join_cols,
999
                sql_gen.filter_out))
1000
        else:
1001
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1002
        main_select = mk_main_select(insert_joins, mapping.values())[0]
1003
        
1004
        log_debug('Trying to insert new rows')
1005
        try:
1006
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1007
                **insert_args)
1008
            break # insert successful
1009
        except DuplicateKeyException, e:
1010
            log_exc(e)
1011
            
1012
            old_join_cols = join_cols.copy()
1013
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1014
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1015
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1016
            assert join_cols != old_join_cols # avoid infinite loops
1017
        except NullValueException, e:
1018
            log_exc(e)
1019
            
1020
            out_col, = e.cols
1021
            try: in_col = mapping[out_col]
1022
            except KeyError:
1023
                log_debug('Missing mapping for NOT NULL column '+out_col)
1024
                remove_all_rows()
1025
            else: remove_rows(in_col, None)
1026
        except FunctionValueException, e:
1027
            log_exc(e)
1028
            
1029
            func_name = e.name
1030
            value = e.value
1031
            for out_col, in_col in mapping.iteritems():
1032
                invalid2null(sql_gen.unwrap_func_call(in_col, func_name), value)
1033
        except MissingCastException, e:
1034
            log_exc(e)
1035
            
1036
            out_col = e.col
1037
            mapping[out_col] = sql_gen.wrap_in_func(e.type, mapping[out_col])
1038
        except DatabaseErrors, e:
1039
            log_exc(e)
1040
            
1041
            msg = 'No handler for exception: '+exc.str_(e)
1042
            warnings.warn(DbWarning(msg))
1043
            log_debug(msg)
1044
            remove_all_rows()
1045
        # after exception handled, rerun loop with additional constraints
1046
    
1047
    if row_ct_ref != None and cur.rowcount >= 0:
1048
        row_ct_ref[0] += cur.rowcount
1049
    
1050
    if has_joins:
1051
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1052
        log_debug('Getting output table pkeys of existing/inserted rows')
1053
        insert_into_pkeys(select_joins, pkeys_cols)
1054
    else:
1055
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1056
        
1057
        log_debug('Getting input table pkeys of inserted rows')
1058
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
1059
            into=insert_in_pkeys)
1060
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1061
        
1062
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1063
            insert_in_pkeys)
1064
        
1065
        log_debug('Combining output and input pkeys in inserted order')
1066
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1067
            {row_num_col: sql_gen.join_same_not_null})]
1068
        insert_into_pkeys(pkey_joins, pkeys_names)
1069
    
1070
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1071
    index_pkey(db, into)
1072
    
1073
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1074
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1075
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1076
        # must use join_same_not_null or query will take forever
1077
    insert_into_pkeys(missing_rows_joins,
1078
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1079
    
1080
    assert table_row_count(db, into) == table_row_count(db, in_table)
1081
    
1082
    return sql_gen.Col(out_pkey, into)
1083

    
1084
##### Data cleanup
1085

    
1086
def cleanup_table(db, table, cols):
1087
    def esc_name_(name): return esc_name(db, name)
1088
    
1089
    table = sql_gen.as_Table(table).to_str(db)
1090
    cols = map(esc_name_, cols)
1091
    
1092
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
1093
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
1094
            for col in cols))),
1095
        dict(null0='', null1=r'\N'))
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