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# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
26
    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62

    
63
class NameException(DbException): pass
64

    
65
class DuplicateKeyException(ConstraintException): pass
66

    
67
class NullValueException(ConstraintException): pass
68

    
69
class FunctionValueException(ExceptionWithNameValue): pass
70

    
71
class DuplicateTableException(ExceptionWithName): pass
72

    
73
class DuplicateFunctionException(ExceptionWithName): pass
74

    
75
class EmptyRowException(DbException): pass
76

    
77
##### Warnings
78

    
79
class DbWarning(UserWarning): pass
80

    
81
##### Result retrieval
82

    
83
def col_names(cur): return (col[0] for col in cur.description)
84

    
85
def rows(cur): return iter(lambda: cur.fetchone(), None)
86

    
87
def consume_rows(cur):
88
    '''Used to fetch all rows so result will be cached'''
89
    iters.consume_iter(rows(cur))
90

    
91
def next_row(cur): return rows(cur).next()
92

    
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
96
    return row_
97

    
98
def next_value(cur): return next_row(cur)[0]
99

    
100
def value(cur): return row(cur)[0]
101

    
102
def values(cur): return iters.func_iter(lambda: next_value(cur))
103

    
104
def value_or_none(cur):
105
    try: return value(cur)
106
    except StopIteration: return None
107

    
108
##### Input validation
109

    
110
def esc_name_by_module(module, name):
111
    if module == 'psycopg2' or module == None: quote = '"'
112
    elif module == 'MySQLdb': quote = '`'
113
    else: raise NotImplementedError("Can't escape name for "+module+' database')
114
    return sql_gen.esc_name(name, quote)
115

    
116
def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
118

    
119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
121

    
122
def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
127

    
128
##### Database connections
129

    
130
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
131

    
132
db_engines = {
133
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
134
    'PostgreSQL': ('psycopg2', {}),
135
}
136

    
137
DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
139

    
140
def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144

    
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
147

    
148
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
149

    
150
log_debug_none = lambda msg, level=2: None
151

    
152
class DbConn:
153
    def __init__(self, db_config, serializable=True, autocommit=False,
154
        caching=True, log_debug=log_debug_none):
155
        self.db_config = db_config
156
        self.serializable = serializable
157
        self.autocommit = autocommit
158
        self.caching = caching
159
        self.log_debug = log_debug
160
        self.debug = log_debug != log_debug_none
161
        
162
        self.__db = None
163
        self.query_results = {}
164
        self._savepoint = 0
165
    
166
    def __getattr__(self, name):
167
        if name == '__dict__': raise Exception('getting __dict__')
168
        if name == 'db': return self._db()
169
        else: raise AttributeError()
170
    
171
    def __getstate__(self):
172
        state = copy.copy(self.__dict__) # shallow copy
173
        state['log_debug'] = None # don't pickle the debug callback
174
        state['_DbConn__db'] = None # don't pickle the connection
175
        return state
176
    
177
    def connected(self): return self.__db != None
178
    
179
    def _db(self):
180
        if self.__db == None:
181
            # Process db_config
182
            db_config = self.db_config.copy() # don't modify input!
183
            schemas = db_config.pop('schemas', None)
184
            module_name, mappings = db_engines[db_config.pop('engine')]
185
            module = __import__(module_name)
186
            _add_module(module)
187
            for orig, new in mappings.iteritems():
188
                try: util.rename_key(db_config, orig, new)
189
                except KeyError: pass
190
            
191
            # Connect
192
            self.__db = module.connect(**db_config)
193
            
194
            # Configure connection
195
            if self.serializable and not self.autocommit: run_raw_query(self,
196
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
197
            if schemas != None:
198
                schemas_ = ''.join((esc_name(self, s)+', '
199
                    for s in schemas.split(',')))
200
                run_raw_query(self, "SELECT set_config('search_path', \
201
%s || current_setting('search_path'), false)", [schemas_])
202
        
203
        return self.__db
204
    
205
    class DbCursor(Proxy):
206
        def __init__(self, outer):
207
            Proxy.__init__(self, outer.db.cursor())
208
            self.outer = outer
209
            self.query_results = outer.query_results
210
            self.query_lookup = None
211
            self.result = []
212
        
213
        def execute(self, query, params=None):
214
            self._is_insert = query.upper().find('INSERT') >= 0
215
            self.query_lookup = _query_lookup(query, params)
216
            try:
217
                try:
218
                    return_value = self.inner.execute(query, params)
219
                    self.outer.do_autocommit()
220
                finally: self.query = get_cur_query(self.inner)
221
            except Exception, e:
222
                _add_cursor_info(e, self, query, params)
223
                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
226
            # Fetch all rows so result will be cached
227
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
228
            return return_value
229
        
230
        def fetchone(self):
231
            row = self.inner.fetchone()
232
            if row != None: self.result.append(row)
233
            # otherwise, fetched all rows
234
            else: self._cache_result()
235
            return row
236
        
237
        def _cache_result(self):
238
            # For inserts, only cache exceptions since inserts are not
239
            # idempotent, but an invalid insert will always be invalid
240
            if self.query_results != None and (not self._is_insert
241
                or isinstance(self.result, Exception)):
242
                
243
                assert self.query_lookup != None
244
                self.query_results[self.query_lookup] = self.CacheCursor(
245
                    util.dict_subset(dicts.AttrsDictView(self),
246
                    ['query', 'result', 'rowcount', 'description']))
247
        
248
        class CacheCursor:
249
            def __init__(self, cached_result): self.__dict__ = cached_result
250
            
251
            def execute(self, *args, **kw_args):
252
                if isinstance(self.result, Exception): raise self.result
253
                # otherwise, result is a rows list
254
                self.iter = iter(self.result)
255
            
256
            def fetchone(self):
257
                try: return self.iter.next()
258
                except StopIteration: return None
259
    
260
    def esc_value(self, value):
261
        module = util.root_module(self.db)
262
        if module == 'psycopg2': str_ = self.db.cursor().mogrify('%s', [value])
263
        elif module == 'MySQLdb':
264
            import _mysql
265
            str_ = _mysql.escape_string(value)
266
        else: raise NotImplementedError("Can't escape value for "+module
267
            +' database')
268
        return strings.to_unicode(str_)
269
    
270
    def esc_name(self, name): return esc_name(self, name) # calls global func
271
    
272
    def run_query(self, query, params=None, cacheable=False, log_level=2,
273
        debug_msg_ref=None):
274
        '''
275
        @param log_ignore_excs The log_level will be increased by 2 if the query
276
            throws one of these exceptions.
277
        '''
278
        assert query != None
279
        
280
        if not self.caching: cacheable = False
281
        used_cache = False
282
        try:
283
            # Get cursor
284
            if cacheable:
285
                query_lookup = _query_lookup(query, params)
286
                try:
287
                    cur = self.query_results[query_lookup]
288
                    used_cache = True
289
                except KeyError: cur = self.DbCursor(self)
290
            else: cur = self.db.cursor()
291
            
292
            # Run query
293
            cur.execute(query, params)
294
        finally:
295
            if self.debug and debug_msg_ref != None:# only compute msg if needed
296
                if used_cache: cache_status = 'cache hit'
297
                elif cacheable: cache_status = 'cache miss'
298
                else: cache_status = 'non-cacheable'
299
                query_code = strings.as_code(str(get_cur_query(cur, query,
300
                    params)), 'SQL')
301
                debug_msg_ref[0] = 'DB query: '+cache_status+':\n'+query_code
302
        
303
        return cur
304
    
305
    def is_cached(self, query, params=None):
306
        return _query_lookup(query, params) in self.query_results
307
    
308
    def with_savepoint(self, func):
309
        savepoint = 'level_'+str(self._savepoint)
310
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
311
        self._savepoint += 1
312
        try: 
313
            try: return_val = func()
314
            finally:
315
                self._savepoint -= 1
316
                assert self._savepoint >= 0
317
        except:
318
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
319
            raise
320
        else:
321
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
322
            self.do_autocommit()
323
            return return_val
324
    
325
    def do_autocommit(self):
326
        '''Autocommits if outside savepoint'''
327
        assert self._savepoint >= 0
328
        if self.autocommit and self._savepoint == 0:
329
            self.log_debug('Autocommiting')
330
            self.db.commit()
331

    
332
connect = DbConn
333

    
334
##### Querying
335

    
336
def run_raw_query(db, *args, **kw_args):
337
    '''For params, see DbConn.run_query()'''
338
    return db.run_query(*args, **kw_args)
339

    
340
def mogrify(db, query, params):
341
    module = util.root_module(db.db)
342
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
343
    else: raise NotImplementedError("Can't mogrify query for "+module+
344
        ' database')
345

    
346
##### Recoverable querying
347

    
348
def with_savepoint(db, func): return db.with_savepoint(func)
349

    
350
def run_query(db, query, params=None, recover=None, cacheable=False,
351
    log_level=2, log_ignore_excs=None, **kw_args):
352
    '''For params, see run_raw_query()'''
353
    if recover == None: recover = False
354
    if log_ignore_excs == None: log_ignore_excs = ()
355
    log_ignore_excs = tuple(log_ignore_excs)
356
    
357
    debug_msg_ref = [None]
358
    try:
359
        try:
360
            def run(): return run_raw_query(db, query, params, cacheable,
361
                log_level, debug_msg_ref, **kw_args)
362
            if recover and not db.is_cached(query, params):
363
                return with_savepoint(db, run)
364
            else: return run() # don't need savepoint if cached
365
        except Exception, e:
366
            if not recover: raise # need savepoint to run index_cols()
367
            msg = exc.str_(e)
368
            
369
            match = re.search(r'duplicate key value violates unique constraint '
370
                r'"((_?[^\W_]+)_.+?)"', msg)
371
            if match:
372
                constraint, table = match.groups()
373
                try: cols = index_cols(db, table, constraint)
374
                except NotImplementedError: raise e
375
                else: raise DuplicateKeyException(constraint, cols, e)
376
            
377
            match = re.search(r'null value in column "(.+?)" violates not-null'
378
                r' constraint', msg)
379
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
380
            
381
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
382
                r'|date/time field value out of range): "(.+?)"\n'
383
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
384
            if match:
385
                value, name = match.groups()
386
                raise FunctionValueException(name, strings.to_unicode(value), e)
387
            
388
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
389
                r'is of type', msg)
390
            if match:
391
                col, type_ = match.groups()
392
                raise MissingCastException(type_, col, e)
393
            
394
            match = re.search(r'relation "(.+?)" already exists', msg)
395
            if match: raise DuplicateTableException(match.group(1), e)
396
            
397
            match = re.search(r'function "(.+?)" already exists', msg)
398
            if match: raise DuplicateFunctionException(match.group(1), e)
399
            
400
            raise # no specific exception raised
401
    except log_ignore_excs:
402
        log_level += 2
403
        raise
404
    finally:
405
        if debug_msg_ref[0] != None: db.log_debug(debug_msg_ref[0], log_level)
406

    
407
##### Basic queries
408

    
409
identifier_max_len = 64 # for both PostgreSQL and MySQL
410

    
411
def next_version(name):
412
    version = 1 # first existing name was version 0
413
    match = re.match(r'^(.*)#(\d+)$', name)
414
    if match:
415
        name, version = match.groups()
416
        version = int(version)+1
417
    return strings.add_suffix(name, '#'+str(version), identifier_max_len)
418

    
419
def run_query_into(db, query, params, into=None, *args, **kw_args):
420
    '''Outputs a query to a temp table.
421
    For params, see run_query().
422
    '''
423
    if into == None: return run_query(db, query, params, *args, **kw_args)
424
    else: # place rows in temp table
425
        assert isinstance(into, sql_gen.Table)
426
        
427
        kw_args['recover'] = True
428
        kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
429
        
430
        temp = not db.autocommit # tables are permanent in autocommit mode
431
        # "temporary tables cannot specify a schema name", so remove schema
432
        if temp: into.schema = None
433
        
434
        while True:
435
            try:
436
                create_query = 'CREATE'
437
                if temp: create_query += ' TEMP'
438
                create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
439
                
440
                return run_query(db, create_query, params, *args, **kw_args)
441
                    # CREATE TABLE AS sets rowcount to # rows in query
442
            except DuplicateTableException, e:
443
                into.name = next_version(into.name)
444
                # try again with next version of name
445

    
446
order_by_pkey = object() # tells mk_select() to order by the pkey
447

    
448
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
449

    
450
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
451
    start=None, order_by=order_by_pkey, default_table=None):
452
    '''
453
    @param tables The single table to select from, or a list of tables to join
454
        together, with tables after the first being sql_gen.Join objects
455
    @param fields Use None to select all fields in the table
456
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
457
        * container can be any iterable type
458
        * compare_left_side: sql_gen.Code|str (for col name)
459
        * compare_right_side: sql_gen.ValueCond|literal value
460
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
461
        use all columns
462
    @return tuple(query, params)
463
    '''
464
    # Parse tables param
465
    if not lists.is_seq(tables): tables = [tables]
466
    tables = list(tables) # don't modify input! (list() copies input)
467
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
468
    
469
    # Parse other params
470
    if conds == None: conds = []
471
    elif isinstance(conds, dict): conds = conds.items()
472
    conds = list(conds) # don't modify input! (list() copies input)
473
    assert limit == None or type(limit) == int
474
    assert start == None or type(start) == int
475
    if order_by is order_by_pkey:
476
        if distinct_on != []: order_by = None
477
        else: order_by = pkey(db, table0, recover=True)
478
    
479
    query = 'SELECT'
480
    
481
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
482
    
483
    # DISTINCT ON columns
484
    if distinct_on != []:
485
        query += '\nDISTINCT'
486
        if distinct_on is not distinct_on_all:
487
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
488
    
489
    # Columns
490
    query += '\n'
491
    if fields == None: query += '*'
492
    else: query += '\n, '.join(map(parse_col, fields))
493
    
494
    # Main table
495
    query += '\nFROM '+table0.to_str(db)
496
    
497
    # Add joins
498
    left_table = table0
499
    for join_ in tables:
500
        table = join_.table
501
        
502
        # Parse special values
503
        if join_.type_ is sql_gen.filter_out: # filter no match
504
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
505
                None))
506
        
507
        query += '\n'+join_.to_str(db, left_table)
508
        
509
        left_table = table
510
    
511
    missing = True
512
    if conds != []:
513
        if len(conds) == 1: whitespace = ' '
514
        else: whitespace = '\n'
515
        query += '\n'+sql_gen.combine_conds([sql_gen.ColValueCond(l, r)
516
            .to_str(db) for l, r in conds], 'WHERE')
517
        missing = False
518
    if order_by != None:
519
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
520
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
521
    if start != None:
522
        if start != 0: query += '\nOFFSET '+str(start)
523
        missing = False
524
    if missing: warnings.warn(DbWarning(
525
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
526
    
527
    return (query, [])
528

    
529
def select(db, *args, **kw_args):
530
    '''For params, see mk_select() and run_query()'''
531
    recover = kw_args.pop('recover', None)
532
    cacheable = kw_args.pop('cacheable', True)
533
    log_level = kw_args.pop('log_level', 2)
534
    
535
    query, params = mk_select(db, *args, **kw_args)
536
    return run_query(db, query, params, recover, cacheable, log_level=log_level)
537

    
538
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
539
    returning=None, embeddable=False):
540
    '''
541
    @param returning str|None An inserted column (such as pkey) to return
542
    @param embeddable Whether the query should be embeddable as a nested SELECT.
543
        Warning: If you set this and cacheable=True when the query is run, the
544
        query will be fully cached, not just if it raises an exception.
545
    '''
546
    table = sql_gen.as_Table(table)
547
    if cols == []: cols = None # no cols (all defaults) = unknown col names
548
    if cols != None: cols = [sql_gen.as_Col(v).to_str(db) for v in cols]
549
    if select_query == None: select_query = 'DEFAULT VALUES'
550
    if returning != None: returning = sql_gen.as_Col(returning, table)
551
    
552
    # Build query
553
    first_line = 'INSERT INTO '+table.to_str(db)
554
    query = first_line
555
    if cols != None: query += '\n('+', '.join(cols)+')'
556
    query += '\n'+select_query
557
    
558
    if returning != None:
559
        returning_name = copy.copy(returning)
560
        returning_name.table = None
561
        returning_name = returning_name.to_str(db)
562
        query += '\nRETURNING '+returning_name
563
    
564
    if embeddable:
565
        assert returning != None
566
        
567
        # Create function
568
        function_name = sql_gen.clean_name(first_line)
569
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
570
        while True:
571
            try:
572
                func_schema = None
573
                if not db.autocommit: func_schema = 'pg_temp'
574
                function = sql_gen.Table(function_name, func_schema).to_str(db)
575
                
576
                function_query = '''\
577
CREATE FUNCTION '''+function+'''()
578
RETURNS '''+return_type+'''
579
LANGUAGE sql
580
AS $$
581
'''+mogrify(db, query, params)+''';
582
$$;
583
'''
584
                run_query(db, function_query, recover=True, cacheable=True,
585
                    log_ignore_excs=(DuplicateFunctionException,))
586
                break # this version was successful
587
            except DuplicateFunctionException, e:
588
                function_name = next_version(function_name)
589
                # try again with next version of name
590
        
591
        # Return query that uses function
592
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
593
            [returning_name]) # AS clause requires function alias
594
        return mk_select(db, func_table, start=0, order_by=None)
595
    
596
    return (query, params)
597

    
598
def insert_select(db, *args, **kw_args):
599
    '''For params, see mk_insert_select() and run_query_into()
600
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
601
        values in
602
    '''
603
    into = kw_args.pop('into', None)
604
    if into != None: kw_args['embeddable'] = True
605
    recover = kw_args.pop('recover', None)
606
    cacheable = kw_args.pop('cacheable', True)
607
    
608
    query, params = mk_insert_select(db, *args, **kw_args)
609
    return run_query_into(db, query, params, into, recover=recover,
610
        cacheable=cacheable)
611

    
612
default = object() # tells insert() to use the default value for a column
613

    
614
def insert(db, table, row, *args, **kw_args):
615
    '''For params, see insert_select()'''
616
    if lists.is_seq(row): cols = None
617
    else:
618
        cols = row.keys()
619
        row = row.values()
620
    row = list(row) # ensure that "!= []" works
621
    
622
    # Check for special values
623
    labels = []
624
    values = []
625
    for value in row:
626
        if value is default: labels.append('DEFAULT')
627
        else:
628
            labels.append('%s')
629
            values.append(value)
630
    
631
    # Build query
632
    if values != []: query = 'VALUES ('+(', '.join(labels))+')'
633
    else: query = None
634
    
635
    return insert_select(db, table, cols, query, values, *args, **kw_args)
636

    
637
def mk_update(db, table, changes=None, cond=None):
638
    '''
639
    @param changes [(col, new_value),...]
640
        * container can be any iterable type
641
        * col: sql_gen.Code|str (for col name)
642
        * new_value: sql_gen.Code|literal value
643
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
644
    @return str query
645
    '''
646
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
647
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
648
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
649
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
650
    
651
    return query
652

    
653
def update(db, *args, **kw_args):
654
    '''For params, see mk_update() and run_query()'''
655
    recover = kw_args.pop('recover', None)
656
    
657
    return run_query(db, mk_update(db, *args, **kw_args), [], recover)
658

    
659
def last_insert_id(db):
660
    module = util.root_module(db.db)
661
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
662
    elif module == 'MySQLdb': return db.insert_id()
663
    else: return None
664

    
665
def truncate(db, table, schema='public'):
666
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
667

    
668
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
669
    '''Creates a mapping from original column names (which may have collisions)
670
    to names that will be distinct among the columns' tables.
671
    This is meant to be used for several tables that are being joined together.
672
    @param cols The columns to combine. Duplicates will be removed.
673
    @param into The table for the new columns.
674
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
675
        columns will be included in the mapping even if they are not in cols.
676
        The tables of the provided Col objects will be changed to into, so make
677
        copies of them if you want to keep the original tables.
678
    @param as_items Whether to return a list of dict items instead of a dict
679
    @return dict(orig_col=new_col, ...)
680
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
681
        * new_col: sql_gen.Col(orig_col_name, into)
682
        * All mappings use the into table so its name can easily be
683
          changed for all columns at once
684
    '''
685
    cols = lists.uniqify(cols)
686
    
687
    items = []
688
    for col in preserve:
689
        orig_col = copy.copy(col)
690
        col.table = into
691
        items.append((orig_col, col))
692
    preserve = set(preserve)
693
    for col in cols:
694
        if col not in preserve: items.append((col, sql_gen.Col(str(col), into)))
695
    
696
    if not as_items: items = dict(items)
697
    return items
698

    
699
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
700
    '''For params, see mk_flatten_mapping()
701
    @return See return value of mk_flatten_mapping()
702
    '''
703
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
704
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
705
    run_query_into(db, *mk_select(db, joins, cols, limit=limit, start=start),
706
        into=into)
707
    return dict(items)
708

    
709
##### Database structure queries
710

    
711
def table_row_count(db, table, recover=None):
712
    return value(run_query(db, *mk_select(db, table, [sql_gen.row_count],
713
        order_by=None, start=0), recover=recover, log_level=3))
714

    
715
def table_cols(db, table, recover=None):
716
    return list(col_names(select(db, table, limit=0, order_by=None,
717
        recover=recover, log_level=4)))
718

    
719
def pkey(db, table, recover=None):
720
    '''Assumed to be first column in table'''
721
    return table_cols(db, table, recover)[0]
722

    
723
not_null_col = 'not_null_col'
724

    
725
def table_not_null_col(db, table, recover=None):
726
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
727
    if not_null_col in table_cols(db, table, recover): return not_null_col
728
    else: return pkey(db, table, recover)
729

    
730
def index_cols(db, table, index):
731
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
732
    automatically created. When you don't know whether something is a UNIQUE
733
    constraint or a UNIQUE index, use this function.'''
734
    module = util.root_module(db.db)
735
    if module == 'psycopg2':
736
        return list(values(run_query(db, '''\
737
SELECT attname
738
FROM
739
(
740
        SELECT attnum, attname
741
        FROM pg_index
742
        JOIN pg_class index ON index.oid = indexrelid
743
        JOIN pg_class table_ ON table_.oid = indrelid
744
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
745
        WHERE
746
            table_.relname = %(table)s
747
            AND index.relname = %(index)s
748
    UNION
749
        SELECT attnum, attname
750
        FROM
751
        (
752
            SELECT
753
                indrelid
754
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
755
                    AS indkey
756
            FROM pg_index
757
            JOIN pg_class index ON index.oid = indexrelid
758
            JOIN pg_class table_ ON table_.oid = indrelid
759
            WHERE
760
                table_.relname = %(table)s
761
                AND index.relname = %(index)s
762
        ) s
763
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
764
) s
765
ORDER BY attnum
766
''',
767
            {'table': table, 'index': index}, cacheable=True, log_level=4)))
768
    else: raise NotImplementedError("Can't list index columns for "+module+
769
        ' database')
770

    
771
def constraint_cols(db, table, constraint):
772
    module = util.root_module(db.db)
773
    if module == 'psycopg2':
774
        return list(values(run_query(db, '''\
775
SELECT attname
776
FROM pg_constraint
777
JOIN pg_class ON pg_class.oid = conrelid
778
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
779
WHERE
780
    relname = %(table)s
781
    AND conname = %(constraint)s
782
ORDER BY attnum
783
''',
784
            {'table': table, 'constraint': constraint})))
785
    else: raise NotImplementedError("Can't list constraint columns for "+module+
786
        ' database')
787

    
788
row_num_col = '_row_num'
789

    
790
def add_index(db, expr):
791
    '''Adds an index on a column or expression if it doesn't already exist.
792
    Currently, only function calls are supported as expressions.
793
    '''
794
    expr = copy.copy(expr) # don't modify input!
795
    
796
    # Extract col
797
    if isinstance(expr, sql_gen.FunctionCall):
798
        col = expr.args[0]
799
        expr = sql_gen.Expr(expr)
800
    else: col = expr
801
    assert sql_gen.is_table_col(col)
802
    
803
    index = sql_gen.as_Table(str(expr))
804
    table = col.table
805
    col.table = None
806
    try: run_query(db, 'CREATE INDEX '+index.to_str(db)+' ON '+table.to_str(db)
807
        +' ('+expr.to_str(db)+')', recover=True, cacheable=True, log_level=3)
808
    except DuplicateTableException: pass # index already existed
809

    
810
def index_pkey(db, table, recover=None):
811
    '''Makes the first column in a table the primary key.
812
    @pre The table must not already have a primary key.
813
    '''
814
    table = sql_gen.as_Table(table)
815
    
816
    index = sql_gen.as_Table(table.name+'_pkey')
817
    col = sql_gen.to_name_only_col(pkey(db, table, recover))
818
    run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD CONSTRAINT '
819
        +index.to_str(db)+' PRIMARY KEY('+col.to_str(db)+')', recover=recover,
820
        log_level=3)
821

    
822
def add_row_num(db, table):
823
    '''Adds a row number column to a table. Its name is in row_num_col. It will
824
    be the primary key.'''
825
    table = sql_gen.as_Table(table).to_str(db)
826
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
827
        +' serial NOT NULL PRIMARY KEY', log_level=3)
828

    
829
def tables(db, schema_like='public', table_like='%'):
830
    module = util.root_module(db.db)
831
    params = {'schema_like': schema_like, 'table_like': table_like}
832
    if module == 'psycopg2':
833
        return values(run_query(db, '''\
834
SELECT tablename
835
FROM pg_tables
836
WHERE
837
    schemaname LIKE %(schema_like)s
838
    AND tablename LIKE %(table_like)s
839
ORDER BY tablename
840
''',
841
            params, cacheable=True))
842
    elif module == 'MySQLdb':
843
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
844
            cacheable=True))
845
    else: raise NotImplementedError("Can't list tables for "+module+' database')
846

    
847
##### Database management
848

    
849
def empty_db(db, schema='public', **kw_args):
850
    '''For kw_args, see tables()'''
851
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
852

    
853
##### Heuristic queries
854

    
855
def put(db, table, row, pkey_=None, row_ct_ref=None):
856
    '''Recovers from errors.
857
    Only works under PostgreSQL (uses INSERT RETURNING).
858
    '''
859
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
860
    
861
    try:
862
        cur = insert(db, table, row, pkey_, recover=True)
863
        if row_ct_ref != None and cur.rowcount >= 0:
864
            row_ct_ref[0] += cur.rowcount
865
        return value(cur)
866
    except DuplicateKeyException, e:
867
        return value(select(db, table, [pkey_],
868
            util.dict_subset_right_join(row, e.cols), recover=True))
869

    
870
def get(db, table, row, pkey, row_ct_ref=None, create=False):
871
    '''Recovers from errors'''
872
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
873
    except StopIteration:
874
        if not create: raise
875
        return put(db, table, row, pkey, row_ct_ref) # insert new row
876

    
877
def into_table_name(out_table, mapping, is_func):
878
    str_ = str(out_table)
879
    if is_func:
880
        def col(out_col, in_col):
881
            # Add out_col
882
            out_col = sql_gen.to_name_only_col(out_col)
883
            str_ = ''
884
            if out_col.name != 'value': str_ += str(out_col)+'='
885
            
886
            # Add in_col
887
            in_col = sql_gen.to_name_only_col(sql_gen.remove_col_rename(in_col))
888
            str_ += str(in_col)
889
            
890
            return str_
891
        
892
        str_ += '('+(', '.join((col(k, v) for k, v in mapping.iteritems())))+')'
893
    else: str_ += '_pkeys'
894
    return str_
895

    
896
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
897
    default=None, is_func=False):
898
    '''Recovers from errors.
899
    Only works under PostgreSQL (uses INSERT RETURNING).
900
    @param in_tables The main input table to select from, followed by a list of
901
        tables to join with it using the main input table's pkey
902
    @param mapping dict(out_table_col=in_table_col, ...)
903
        * out_table_col: sql_gen.Col|str
904
        * in_table_col: sql_gen.Col Wrap literal values in a sql_gen.NamedCol
905
    @param into The table to contain the output and input pkeys.
906
        Defaults to `out_table.name+'_pkeys'`.
907
    @param default The *output* column to use as the pkey for missing rows.
908
        If this output column does not exist in the mapping, uses None.
909
    @param is_func Whether out_table is the name of a SQL function, not a table
910
    @return sql_gen.Col Where the output pkeys are made available
911
    '''
912
    out_table = sql_gen.as_Table(out_table)
913
    mapping = sql_gen.ColDict(mapping)
914
    if into == None: into = into_table_name(out_table, mapping, is_func)
915
    into = sql_gen.as_Table(into)
916
    
917
    def log_debug(msg): db.log_debug(msg, level=1.5)
918
    def col_ustr(str_):
919
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
920
    
921
    log_debug('********** New iteration **********')
922
    log_debug('Inserting these input columns into '+strings.as_tt(
923
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
924
    
925
    # Create input joins from list of input tables
926
    in_tables_ = in_tables[:] # don't modify input!
927
    in_tables0 = in_tables_.pop(0) # first table is separate
928
    in_pkey = pkey(db, in_tables0, recover=True)
929
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
930
    input_joins = [in_tables0]+[sql_gen.Join(v,
931
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
932
    
933
    log_debug('Joining together input tables into temp table')
934
    # Place in new table for speed and so don't modify input if values edited
935
    in_table = sql_gen.Table('in')
936
    flatten_cols = filter(sql_gen.is_table_col, mapping.values())
937
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins,
938
        flatten_cols, preserve=[in_pkey_col], start=0))
939
    input_joins = [in_table]
940
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
941
    
942
    # Resolve default value column
943
    try: default = mapping[default]
944
    except KeyError:
945
        if default != None:
946
            db.log_debug('Default value column '
947
                +strings.as_tt(strings.repr_no_u(default))
948
                +' does not exist in mapping, falling back to None', level=2.1)
949
            default = None
950
    
951
    out_pkey = pkey(db, out_table, recover=True)
952
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
953
    
954
    pkeys_names = [in_pkey, out_pkey]
955
    pkeys_cols = [in_pkey_col, out_pkey_col]
956
    
957
    pkeys_table_exists_ref = [False]
958
    def insert_into_pkeys(joins, cols):
959
        query, params = mk_select(db, joins, cols, order_by=None, start=0)
960
        if pkeys_table_exists_ref[0]:
961
            insert_select(db, into, pkeys_names, query, params)
962
        else:
963
            run_query_into(db, query, params, into=into)
964
            pkeys_table_exists_ref[0] = True
965
    
966
    limit_ref = [None]
967
    conds = set()
968
    distinct_on = []
969
    def mk_main_select(joins, cols):
970
        return mk_select(db, joins, cols, conds, distinct_on,
971
            limit=limit_ref[0], start=0)
972
    
973
    exc_strs = set()
974
    def log_exc(e):
975
        e_str = exc.str_(e, first_line_only=True)
976
        log_debug('Caught exception: '+e_str)
977
        assert e_str not in exc_strs # avoid infinite loops
978
        exc_strs.add(e_str)
979
    def remove_all_rows():
980
        log_debug('Returning NULL for all rows')
981
        limit_ref[0] = 0 # just create an empty pkeys table
982
    def ignore(in_col, value):
983
        in_col_str = strings.as_tt(repr(in_col))
984
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
985
            level=2.5)
986
        add_index(db, in_col)
987
        log_debug('Ignoring rows with '+in_col_str+' = '
988
            +strings.as_tt(repr(value)))
989
    def remove_rows(in_col, value):
990
        ignore(in_col, value)
991
        cond = (in_col, sql_gen.CompareCond(value, '!='))
992
        assert cond not in conds # avoid infinite loops
993
        conds.add(cond)
994
    def invalid2null(in_col, value):
995
        ignore(in_col, value)
996
        update(db, in_table, [(in_col, None)],
997
            sql_gen.ColValueCond(in_col, value))
998
    
999
    # Do inserts and selects
1000
    join_cols = sql_gen.ColDict()
1001
    insert_out_pkeys = sql_gen.Table(in_table.name+'_insert_out_pkeys')
1002
    insert_in_pkeys = sql_gen.Table(in_table.name+'_insert_in_pkeys')
1003
    while True:
1004
        if limit_ref[0] == 0: # special case
1005
            log_debug('Creating an empty pkeys table')
1006
            cur = run_query_into(db, *mk_select(db, out_table, [out_pkey],
1007
                limit=limit_ref[0]), into=insert_out_pkeys)
1008
            break # don't do main case
1009
        
1010
        has_joins = join_cols != {}
1011
        
1012
        # Prepare to insert new rows
1013
        insert_joins = input_joins[:] # don't modify original!
1014
        insert_args = dict(recover=True, cacheable=False)
1015
        if has_joins:
1016
            distinct_on = [v.to_Col() for v in join_cols.values()]
1017
            insert_joins.append(sql_gen.Join(out_table, join_cols,
1018
                sql_gen.filter_out))
1019
        else:
1020
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1021
        main_select = mk_main_select(insert_joins, mapping.values())[0]
1022
        
1023
        log_debug('Trying to insert new rows')
1024
        try:
1025
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1026
                **insert_args)
1027
            break # insert successful
1028
        except DuplicateKeyException, e:
1029
            log_exc(e)
1030
            
1031
            old_join_cols = join_cols.copy()
1032
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1033
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1034
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1035
            assert join_cols != old_join_cols # avoid infinite loops
1036
        except NullValueException, e:
1037
            log_exc(e)
1038
            
1039
            out_col, = e.cols
1040
            try: in_col = mapping[out_col]
1041
            except KeyError:
1042
                log_debug('Missing mapping for NOT NULL column '+out_col)
1043
                remove_all_rows()
1044
            else: remove_rows(in_col, None)
1045
        except FunctionValueException, e:
1046
            log_exc(e)
1047
            
1048
            func_name = e.name
1049
            value = e.value
1050
            for out_col, in_col in mapping.iteritems():
1051
                invalid2null(sql_gen.unwrap_func_call(in_col, func_name), value)
1052
        except MissingCastException, e:
1053
            log_exc(e)
1054
            
1055
            out_col = e.col
1056
            mapping[out_col] = sql_gen.wrap_in_func(e.type, mapping[out_col])
1057
        except DatabaseErrors, e:
1058
            log_exc(e)
1059
            
1060
            msg = 'No handler for exception: '+exc.str_(e)
1061
            warnings.warn(DbWarning(msg))
1062
            log_debug(msg)
1063
            remove_all_rows()
1064
        # after exception handled, rerun loop with additional constraints
1065
    
1066
    if row_ct_ref != None and cur.rowcount >= 0:
1067
        row_ct_ref[0] += cur.rowcount
1068
    
1069
    if has_joins:
1070
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1071
        log_debug('Getting output table pkeys of existing/inserted rows')
1072
        insert_into_pkeys(select_joins, pkeys_cols)
1073
    else:
1074
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1075
        
1076
        log_debug('Getting input table pkeys of inserted rows')
1077
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
1078
            into=insert_in_pkeys)
1079
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1080
        
1081
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1082
            insert_in_pkeys)
1083
        
1084
        log_debug('Combining output and input pkeys in inserted order')
1085
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1086
            {row_num_col: sql_gen.join_same_not_null})]
1087
        insert_into_pkeys(pkey_joins, pkeys_names)
1088
    
1089
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1090
    index_pkey(db, into)
1091
    
1092
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1093
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1094
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1095
        # must use join_same_not_null or query will take forever
1096
    insert_into_pkeys(missing_rows_joins,
1097
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1098
    
1099
    assert table_row_count(db, into) == table_row_count(db, in_table)
1100
    
1101
    return sql_gen.Col(out_pkey, into)
1102

    
1103
##### Data cleanup
1104

    
1105
def cleanup_table(db, table, cols):
1106
    def esc_name_(name): return esc_name(db, name)
1107
    
1108
    table = sql_gen.as_Table(table).to_str(db)
1109
    cols = map(esc_name_, cols)
1110
    
1111
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
1112
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
1113
            for col in cols))),
1114
        dict(null0='', null1=r'\N'))
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