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# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
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    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62

    
63
class NameException(DbException): pass
64

    
65
class DuplicateKeyException(ConstraintException): pass
66

    
67
class NullValueException(ConstraintException): pass
68

    
69
class FunctionValueException(ExceptionWithNameValue): pass
70

    
71
class DuplicateTableException(ExceptionWithName): pass
72

    
73
class DuplicateFunctionException(ExceptionWithName): pass
74

    
75
class EmptyRowException(DbException): pass
76

    
77
##### Warnings
78

    
79
class DbWarning(UserWarning): pass
80

    
81
##### Result retrieval
82

    
83
def col_names(cur): return (col[0] for col in cur.description)
84

    
85
def rows(cur): return iter(lambda: cur.fetchone(), None)
86

    
87
def consume_rows(cur):
88
    '''Used to fetch all rows so result will be cached'''
89
    iters.consume_iter(rows(cur))
90

    
91
def next_row(cur): return rows(cur).next()
92

    
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
96
    return row_
97

    
98
def next_value(cur): return next_row(cur)[0]
99

    
100
def value(cur): return row(cur)[0]
101

    
102
def values(cur): return iters.func_iter(lambda: next_value(cur))
103

    
104
def value_or_none(cur):
105
    try: return value(cur)
106
    except StopIteration: return None
107

    
108
##### Input validation
109

    
110
def esc_name_by_module(module, name):
111
    if module == 'psycopg2' or module == None: quote = '"'
112
    elif module == 'MySQLdb': quote = '`'
113
    else: raise NotImplementedError("Can't escape name for "+module+' database')
114
    return sql_gen.esc_name(name, quote)
115

    
116
def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
118

    
119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
121

    
122
def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
127

    
128
##### Database connections
129

    
130
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
131

    
132
db_engines = {
133
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
134
    'PostgreSQL': ('psycopg2', {}),
135
}
136

    
137
DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
139

    
140
def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144

    
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
147

    
148
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
149

    
150
log_debug_none = lambda msg, level=2: None
151

    
152
class DbConn:
153
    def __init__(self, db_config, serializable=True, autocommit=False,
154
        caching=True, log_debug=log_debug_none):
155
        self.db_config = db_config
156
        self.serializable = serializable
157
        self.autocommit = autocommit
158
        self.caching = caching
159
        self.log_debug = log_debug
160
        self.debug = log_debug != log_debug_none
161
        
162
        self.__db = None
163
        self.query_results = {}
164
        self._savepoint = 0
165
    
166
    def __getattr__(self, name):
167
        if name == '__dict__': raise Exception('getting __dict__')
168
        if name == 'db': return self._db()
169
        else: raise AttributeError()
170
    
171
    def __getstate__(self):
172
        state = copy.copy(self.__dict__) # shallow copy
173
        state['log_debug'] = None # don't pickle the debug callback
174
        state['_DbConn__db'] = None # don't pickle the connection
175
        return state
176
    
177
    def connected(self): return self.__db != None
178
    
179
    def _db(self):
180
        if self.__db == None:
181
            # Process db_config
182
            db_config = self.db_config.copy() # don't modify input!
183
            schemas = db_config.pop('schemas', None)
184
            module_name, mappings = db_engines[db_config.pop('engine')]
185
            module = __import__(module_name)
186
            _add_module(module)
187
            for orig, new in mappings.iteritems():
188
                try: util.rename_key(db_config, orig, new)
189
                except KeyError: pass
190
            
191
            # Connect
192
            self.__db = module.connect(**db_config)
193
            
194
            # Configure connection
195
            if self.serializable and not self.autocommit: run_raw_query(self,
196
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
197
            if schemas != None:
198
                schemas_ = ''.join((esc_name(self, s)+', '
199
                    for s in schemas.split(',')))
200
                run_raw_query(self, "SELECT set_config('search_path', \
201
%s || current_setting('search_path'), false)", [schemas_])
202
        
203
        return self.__db
204
    
205
    class DbCursor(Proxy):
206
        def __init__(self, outer):
207
            Proxy.__init__(self, outer.db.cursor())
208
            self.outer = outer
209
            self.query_results = outer.query_results
210
            self.query_lookup = None
211
            self.result = []
212
        
213
        def execute(self, query, params=None):
214
            self._is_insert = query.upper().find('INSERT') >= 0
215
            self.query_lookup = _query_lookup(query, params)
216
            try:
217
                try:
218
                    return_value = self.inner.execute(query, params)
219
                    self.outer.do_autocommit()
220
                finally: self.query = get_cur_query(self.inner)
221
            except Exception, e:
222
                _add_cursor_info(e, self, query, params)
223
                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
226
            # Fetch all rows so result will be cached
227
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
228
            return return_value
229
        
230
        def fetchone(self):
231
            row = self.inner.fetchone()
232
            if row != None: self.result.append(row)
233
            # otherwise, fetched all rows
234
            else: self._cache_result()
235
            return row
236
        
237
        def _cache_result(self):
238
            # For inserts, only cache exceptions since inserts are not
239
            # idempotent, but an invalid insert will always be invalid
240
            if self.query_results != None and (not self._is_insert
241
                or isinstance(self.result, Exception)):
242
                
243
                assert self.query_lookup != None
244
                self.query_results[self.query_lookup] = self.CacheCursor(
245
                    util.dict_subset(dicts.AttrsDictView(self),
246
                    ['query', 'result', 'rowcount', 'description']))
247
        
248
        class CacheCursor:
249
            def __init__(self, cached_result): self.__dict__ = cached_result
250
            
251
            def execute(self, *args, **kw_args):
252
                if isinstance(self.result, Exception): raise self.result
253
                # otherwise, result is a rows list
254
                self.iter = iter(self.result)
255
            
256
            def fetchone(self):
257
                try: return self.iter.next()
258
                except StopIteration: return None
259
    
260
    def esc_value(self, value):
261
        module = util.root_module(self.db)
262
        if module == 'psycopg2': str_ = self.db.cursor().mogrify('%s', [value])
263
        elif module == 'MySQLdb':
264
            import _mysql
265
            str_ = _mysql.escape_string(value)
266
        else: raise NotImplementedError("Can't escape value for "+module
267
            +' database')
268
        return strings.to_unicode(str_)
269
    
270
    def esc_name(self, name): return esc_name(self, name) # calls global func
271
    
272
    def run_query(self, query, params=None, cacheable=False, log_level=2,
273
        debug_msg_ref=None):
274
        '''
275
        @param log_ignore_excs The log_level will be increased by 2 if the query
276
            throws one of these exceptions.
277
        '''
278
        assert query != None
279
        
280
        if not self.caching: cacheable = False
281
        used_cache = False
282
        try:
283
            # Get cursor
284
            if cacheable:
285
                query_lookup = _query_lookup(query, params)
286
                try:
287
                    cur = self.query_results[query_lookup]
288
                    used_cache = True
289
                except KeyError: cur = self.DbCursor(self)
290
            else: cur = self.db.cursor()
291
            
292
            # Run query
293
            cur.execute(query, params)
294
        finally:
295
            if self.debug and debug_msg_ref != None:# only compute msg if needed
296
                if used_cache: cache_status = 'cache hit'
297
                elif cacheable: cache_status = 'cache miss'
298
                else: cache_status = 'non-cacheable'
299
                query_code = strings.as_code(str(get_cur_query(cur, query,
300
                    params)), 'SQL')
301
                debug_msg_ref[0] = 'DB query: '+cache_status+':\n'+query_code
302
        
303
        return cur
304
    
305
    def is_cached(self, query, params=None):
306
        return _query_lookup(query, params) in self.query_results
307
    
308
    def with_savepoint(self, func):
309
        savepoint = 'level_'+str(self._savepoint)
310
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
311
        self._savepoint += 1
312
        try: 
313
            try: return_val = func()
314
            finally:
315
                self._savepoint -= 1
316
                assert self._savepoint >= 0
317
        except:
318
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
319
            raise
320
        else:
321
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
322
            self.do_autocommit()
323
            return return_val
324
    
325
    def do_autocommit(self):
326
        '''Autocommits if outside savepoint'''
327
        assert self._savepoint >= 0
328
        if self.autocommit and self._savepoint == 0:
329
            self.log_debug('Autocommiting')
330
            self.db.commit()
331
    
332
    def col_default(self, col):
333
        table = sql_gen.Table('columns', 'information_schema')
334
        
335
        conds = [('table_name', col.table.name), ('column_name', col.name)]
336
        schema = col.table.schema
337
        if schema != None: conds.append(('table_schema', schema))
338
        
339
        return value(select(self, table, ['column_default'], conds,
340
            order_by='table_schema', limit=1, log_level=3))
341
            # TODO: order_by search_path schema order
342

    
343
connect = DbConn
344

    
345
##### Querying
346

    
347
def run_raw_query(db, *args, **kw_args):
348
    '''For params, see DbConn.run_query()'''
349
    return db.run_query(*args, **kw_args)
350

    
351
def mogrify(db, query, params):
352
    module = util.root_module(db.db)
353
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
354
    else: raise NotImplementedError("Can't mogrify query for "+module+
355
        ' database')
356

    
357
##### Recoverable querying
358

    
359
def with_savepoint(db, func): return db.with_savepoint(func)
360

    
361
def run_query(db, query, params=None, recover=None, cacheable=False,
362
    log_level=2, log_ignore_excs=None, **kw_args):
363
    '''For params, see run_raw_query()'''
364
    if recover == None: recover = False
365
    if log_ignore_excs == None: log_ignore_excs = ()
366
    log_ignore_excs = tuple(log_ignore_excs)
367
    
368
    debug_msg_ref = [None]
369
    try:
370
        try:
371
            def run(): return run_raw_query(db, query, params, cacheable,
372
                log_level, debug_msg_ref, **kw_args)
373
            if recover and not db.is_cached(query, params):
374
                return with_savepoint(db, run)
375
            else: return run() # don't need savepoint if cached
376
        except Exception, e:
377
            if not recover: raise # need savepoint to run index_cols()
378
            msg = exc.str_(e)
379
            
380
            match = re.search(r'duplicate key value violates unique constraint '
381
                r'"((_?[^\W_]+)_.+?)"', msg)
382
            if match:
383
                constraint, table = match.groups()
384
                try: cols = index_cols(db, table, constraint)
385
                except NotImplementedError: raise e
386
                else: raise DuplicateKeyException(constraint, cols, e)
387
            
388
            match = re.search(r'null value in column "(.+?)" violates not-null'
389
                r' constraint', msg)
390
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
391
            
392
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
393
                r'|date/time field value out of range): "(.+?)"\n'
394
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
395
            if match:
396
                value, name = match.groups()
397
                raise FunctionValueException(name, strings.to_unicode(value), e)
398
            
399
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
400
                r'is of type', msg)
401
            if match:
402
                col, type_ = match.groups()
403
                raise MissingCastException(type_, col, e)
404
            
405
            match = re.search(r'relation "(.+?)" already exists', msg)
406
            if match: raise DuplicateTableException(match.group(1), e)
407
            
408
            match = re.search(r'function "(.+?)" already exists', msg)
409
            if match: raise DuplicateFunctionException(match.group(1), e)
410
            
411
            raise # no specific exception raised
412
    except log_ignore_excs:
413
        log_level += 2
414
        raise
415
    finally:
416
        if debug_msg_ref[0] != None: db.log_debug(debug_msg_ref[0], log_level)
417

    
418
##### Basic queries
419

    
420
def next_version(name):
421
    version = 1 # first existing name was version 0
422
    match = re.match(r'^(.*)#(\d+)$', name)
423
    if match:
424
        name, version = match.groups()
425
        version = int(version)+1
426
    return sql_gen.add_suffix(name, '#'+str(version))
427

    
428
def run_query_into(db, query, params, into=None, *args, **kw_args):
429
    '''Outputs a query to a temp table.
430
    For params, see run_query().
431
    '''
432
    if into == None: return run_query(db, query, params, *args, **kw_args)
433
    else: # place rows in temp table
434
        assert isinstance(into, sql_gen.Table)
435
        
436
        kw_args['recover'] = True
437
        kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
438
        
439
        temp = not db.autocommit # tables are permanent in autocommit mode
440
        # "temporary tables cannot specify a schema name", so remove schema
441
        if temp: into.schema = None
442
        
443
        while True:
444
            try:
445
                create_query = 'CREATE'
446
                if temp: create_query += ' TEMP'
447
                create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
448
                
449
                return run_query(db, create_query, params, *args, **kw_args)
450
                    # CREATE TABLE AS sets rowcount to # rows in query
451
            except DuplicateTableException, e:
452
                into.name = next_version(into.name)
453
                # try again with next version of name
454

    
455
order_by_pkey = object() # tells mk_select() to order by the pkey
456

    
457
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
458

    
459
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
460
    start=None, order_by=order_by_pkey, default_table=None):
461
    '''
462
    @param tables The single table to select from, or a list of tables to join
463
        together, with tables after the first being sql_gen.Join objects
464
    @param fields Use None to select all fields in the table
465
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
466
        * container can be any iterable type
467
        * compare_left_side: sql_gen.Code|str (for col name)
468
        * compare_right_side: sql_gen.ValueCond|literal value
469
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
470
        use all columns
471
    @return tuple(query, params)
472
    '''
473
    # Parse tables param
474
    if not lists.is_seq(tables): tables = [tables]
475
    tables = list(tables) # don't modify input! (list() copies input)
476
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
477
    
478
    # Parse other params
479
    if conds == None: conds = []
480
    elif isinstance(conds, dict): conds = conds.items()
481
    conds = list(conds) # don't modify input! (list() copies input)
482
    assert limit == None or type(limit) == int
483
    assert start == None or type(start) == int
484
    if order_by is order_by_pkey:
485
        if distinct_on != []: order_by = None
486
        else: order_by = pkey(db, table0, recover=True)
487
    
488
    query = 'SELECT'
489
    
490
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
491
    
492
    # DISTINCT ON columns
493
    if distinct_on != []:
494
        query += '\nDISTINCT'
495
        if distinct_on is not distinct_on_all:
496
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
497
    
498
    # Columns
499
    query += '\n'
500
    if fields == None: query += '*'
501
    else: query += '\n, '.join(map(parse_col, fields))
502
    
503
    # Main table
504
    query += '\nFROM '+table0.to_str(db)
505
    
506
    # Add joins
507
    left_table = table0
508
    for join_ in tables:
509
        table = join_.table
510
        
511
        # Parse special values
512
        if join_.type_ is sql_gen.filter_out: # filter no match
513
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
514
                None))
515
        
516
        query += '\n'+join_.to_str(db, left_table)
517
        
518
        left_table = table
519
    
520
    missing = True
521
    if conds != []:
522
        if len(conds) == 1: whitespace = ' '
523
        else: whitespace = '\n'
524
        query += '\n'+sql_gen.combine_conds([sql_gen.ColValueCond(l, r)
525
            .to_str(db) for l, r in conds], 'WHERE')
526
        missing = False
527
    if order_by != None:
528
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
529
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
530
    if start != None:
531
        if start != 0: query += '\nOFFSET '+str(start)
532
        missing = False
533
    if missing: warnings.warn(DbWarning(
534
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
535
    
536
    return (query, [])
537

    
538
def select(db, *args, **kw_args):
539
    '''For params, see mk_select() and run_query()'''
540
    recover = kw_args.pop('recover', None)
541
    cacheable = kw_args.pop('cacheable', True)
542
    log_level = kw_args.pop('log_level', 2)
543
    
544
    query, params = mk_select(db, *args, **kw_args)
545
    return run_query(db, query, params, recover, cacheable, log_level=log_level)
546

    
547
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
548
    returning=None, embeddable=False):
549
    '''
550
    @param returning str|None An inserted column (such as pkey) to return
551
    @param embeddable Whether the query should be embeddable as a nested SELECT.
552
        Warning: If you set this and cacheable=True when the query is run, the
553
        query will be fully cached, not just if it raises an exception.
554
    '''
555
    table = sql_gen.as_Table(table)
556
    if cols == []: cols = None # no cols (all defaults) = unknown col names
557
    if cols != None: cols = [sql_gen.as_Col(v).to_str(db) for v in cols]
558
    if select_query == None: select_query = 'DEFAULT VALUES'
559
    if returning != None: returning = sql_gen.as_Col(returning, table)
560
    
561
    # Build query
562
    first_line = 'INSERT INTO '+table.to_str(db)
563
    query = first_line
564
    if cols != None: query += '\n('+', '.join(cols)+')'
565
    query += '\n'+select_query
566
    
567
    if returning != None:
568
        returning_name = copy.copy(returning)
569
        returning_name.table = None
570
        returning_name = returning_name.to_str(db)
571
        query += '\nRETURNING '+returning_name
572
    
573
    if embeddable:
574
        assert returning != None
575
        
576
        # Create function
577
        function_name = sql_gen.clean_name(first_line)
578
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
579
        while True:
580
            try:
581
                func_schema = None
582
                if not db.autocommit: func_schema = 'pg_temp'
583
                function = sql_gen.Table(function_name, func_schema).to_str(db)
584
                
585
                function_query = '''\
586
CREATE FUNCTION '''+function+'''()
587
RETURNS '''+return_type+'''
588
LANGUAGE sql
589
AS $$
590
'''+mogrify(db, query, params)+''';
591
$$;
592
'''
593
                run_query(db, function_query, recover=True, cacheable=True,
594
                    log_ignore_excs=(DuplicateFunctionException,))
595
                break # this version was successful
596
            except DuplicateFunctionException, e:
597
                function_name = next_version(function_name)
598
                # try again with next version of name
599
        
600
        # Return query that uses function
601
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
602
            [returning_name]) # AS clause requires function alias
603
        return mk_select(db, func_table, start=0, order_by=None)
604
    
605
    return (query, params)
606

    
607
def insert_select(db, *args, **kw_args):
608
    '''For params, see mk_insert_select() and run_query_into()
609
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
610
        values in
611
    '''
612
    into = kw_args.pop('into', None)
613
    if into != None: kw_args['embeddable'] = True
614
    recover = kw_args.pop('recover', None)
615
    cacheable = kw_args.pop('cacheable', True)
616
    
617
    query, params = mk_insert_select(db, *args, **kw_args)
618
    return run_query_into(db, query, params, into, recover=recover,
619
        cacheable=cacheable)
620

    
621
default = object() # tells insert() to use the default value for a column
622

    
623
def insert(db, table, row, *args, **kw_args):
624
    '''For params, see insert_select()'''
625
    if lists.is_seq(row): cols = None
626
    else:
627
        cols = row.keys()
628
        row = row.values()
629
    row = list(row) # ensure that "!= []" works
630
    
631
    # Check for special values
632
    labels = []
633
    values = []
634
    for value in row:
635
        if value is default: labels.append('DEFAULT')
636
        else:
637
            labels.append('%s')
638
            values.append(value)
639
    
640
    # Build query
641
    if values != []: query = 'VALUES ('+(', '.join(labels))+')'
642
    else: query = None
643
    
644
    return insert_select(db, table, cols, query, values, *args, **kw_args)
645

    
646
def mk_update(db, table, changes=None, cond=None):
647
    '''
648
    @param changes [(col, new_value),...]
649
        * container can be any iterable type
650
        * col: sql_gen.Code|str (for col name)
651
        * new_value: sql_gen.Code|literal value
652
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
653
    @return str query
654
    '''
655
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
656
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
657
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
658
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
659
    
660
    return query
661

    
662
def update(db, *args, **kw_args):
663
    '''For params, see mk_update() and run_query()'''
664
    recover = kw_args.pop('recover', None)
665
    
666
    return run_query(db, mk_update(db, *args, **kw_args), [], recover)
667

    
668
def last_insert_id(db):
669
    module = util.root_module(db.db)
670
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
671
    elif module == 'MySQLdb': return db.insert_id()
672
    else: return None
673

    
674
def truncate(db, table, schema='public'):
675
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
676

    
677
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
678
    '''Creates a mapping from original column names (which may have collisions)
679
    to names that will be distinct among the columns' tables.
680
    This is meant to be used for several tables that are being joined together.
681
    @param cols The columns to combine. Duplicates will be removed.
682
    @param into The table for the new columns.
683
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
684
        columns will be included in the mapping even if they are not in cols.
685
        The tables of the provided Col objects will be changed to into, so make
686
        copies of them if you want to keep the original tables.
687
    @param as_items Whether to return a list of dict items instead of a dict
688
    @return dict(orig_col=new_col, ...)
689
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
690
        * new_col: sql_gen.Col(orig_col_name, into)
691
        * All mappings use the into table so its name can easily be
692
          changed for all columns at once
693
    '''
694
    cols = lists.uniqify(cols)
695
    
696
    items = []
697
    for col in preserve:
698
        orig_col = copy.copy(col)
699
        col.table = into
700
        items.append((orig_col, col))
701
    preserve = set(preserve)
702
    for col in cols:
703
        if col not in preserve: items.append((col, sql_gen.Col(str(col), into)))
704
    
705
    if not as_items: items = dict(items)
706
    return items
707

    
708
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
709
    '''For params, see mk_flatten_mapping()
710
    @return See return value of mk_flatten_mapping()
711
    '''
712
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
713
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
714
    run_query_into(db, *mk_select(db, joins, cols, limit=limit, start=start),
715
        into=into)
716
    return dict(items)
717

    
718
##### Database structure queries
719

    
720
def table_row_count(db, table, recover=None):
721
    return value(run_query(db, *mk_select(db, table, [sql_gen.row_count],
722
        order_by=None, start=0), recover=recover, log_level=3))
723

    
724
def table_cols(db, table, recover=None):
725
    return list(col_names(select(db, table, limit=0, order_by=None,
726
        recover=recover, log_level=4)))
727

    
728
def pkey(db, table, recover=None):
729
    '''Assumed to be first column in table'''
730
    return table_cols(db, table, recover)[0]
731

    
732
not_null_col = 'not_null_col'
733

    
734
def table_not_null_col(db, table, recover=None):
735
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
736
    if not_null_col in table_cols(db, table, recover): return not_null_col
737
    else: return pkey(db, table, recover)
738

    
739
def index_cols(db, table, index):
740
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
741
    automatically created. When you don't know whether something is a UNIQUE
742
    constraint or a UNIQUE index, use this function.'''
743
    module = util.root_module(db.db)
744
    if module == 'psycopg2':
745
        return list(values(run_query(db, '''\
746
SELECT attname
747
FROM
748
(
749
        SELECT attnum, attname
750
        FROM pg_index
751
        JOIN pg_class index ON index.oid = indexrelid
752
        JOIN pg_class table_ ON table_.oid = indrelid
753
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
754
        WHERE
755
            table_.relname = %(table)s
756
            AND index.relname = %(index)s
757
    UNION
758
        SELECT attnum, attname
759
        FROM
760
        (
761
            SELECT
762
                indrelid
763
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
764
                    AS indkey
765
            FROM pg_index
766
            JOIN pg_class index ON index.oid = indexrelid
767
            JOIN pg_class table_ ON table_.oid = indrelid
768
            WHERE
769
                table_.relname = %(table)s
770
                AND index.relname = %(index)s
771
        ) s
772
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
773
) s
774
ORDER BY attnum
775
''',
776
            {'table': table, 'index': index}, cacheable=True, log_level=4)))
777
    else: raise NotImplementedError("Can't list index columns for "+module+
778
        ' database')
779

    
780
def constraint_cols(db, table, constraint):
781
    module = util.root_module(db.db)
782
    if module == 'psycopg2':
783
        return list(values(run_query(db, '''\
784
SELECT attname
785
FROM pg_constraint
786
JOIN pg_class ON pg_class.oid = conrelid
787
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
788
WHERE
789
    relname = %(table)s
790
    AND conname = %(constraint)s
791
ORDER BY attnum
792
''',
793
            {'table': table, 'constraint': constraint})))
794
    else: raise NotImplementedError("Can't list constraint columns for "+module+
795
        ' database')
796

    
797
row_num_col = '_row_num'
798

    
799
def add_index(db, expr):
800
    '''Adds an index on a column or expression if it doesn't already exist.
801
    Currently, only function calls are supported as expressions.
802
    '''
803
    expr = copy.copy(expr) # don't modify input!
804
    
805
    # Extract col
806
    if isinstance(expr, sql_gen.FunctionCall):
807
        col = expr.args[0]
808
        expr = sql_gen.Expr(expr)
809
    else: col = expr
810
    assert sql_gen.is_table_col(col)
811
    
812
    index = sql_gen.as_Table(str(expr))
813
    table = col.table
814
    col.table = None
815
    try: run_query(db, 'CREATE INDEX '+index.to_str(db)+' ON '+table.to_str(db)
816
        +' ('+expr.to_str(db)+')', recover=True, cacheable=True, log_level=3)
817
    except DuplicateTableException: pass # index already existed
818

    
819
def add_pkey(db, table, recover=None):
820
    '''Makes the first column in a table the primary key.
821
    @pre The table must not already have a primary key.
822
    '''
823
    table = sql_gen.as_Table(table)
824
    
825
    index = sql_gen.as_Table(sql_gen.add_suffix(table.name, '_pkey'))
826
    col = sql_gen.to_name_only_col(pkey(db, table, recover))
827
    try:
828
        run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD CONSTRAINT '
829
            +index.to_str(db)+' PRIMARY KEY('+col.to_str(db)+')',
830
            recover=True, cacheable=True, log_level=3,
831
            log_ignore_excs=(DuplicateTableException,))
832
    except DuplicateTableException, e:
833
        index.name = next_version(index.name)
834
        # try again with next version of name
835

    
836
def add_row_num(db, table):
837
    '''Adds a row number column to a table. Its name is in row_num_col. It will
838
    be the primary key.'''
839
    table = sql_gen.as_Table(table).to_str(db)
840
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
841
        +' serial NOT NULL PRIMARY KEY', log_level=3)
842

    
843
def tables(db, schema_like='public', table_like='%'):
844
    module = util.root_module(db.db)
845
    params = {'schema_like': schema_like, 'table_like': table_like}
846
    if module == 'psycopg2':
847
        return values(run_query(db, '''\
848
SELECT tablename
849
FROM pg_tables
850
WHERE
851
    schemaname LIKE %(schema_like)s
852
    AND tablename LIKE %(table_like)s
853
ORDER BY tablename
854
''',
855
            params, cacheable=True))
856
    elif module == 'MySQLdb':
857
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
858
            cacheable=True))
859
    else: raise NotImplementedError("Can't list tables for "+module+' database')
860

    
861
##### Database management
862

    
863
def empty_db(db, schema='public', **kw_args):
864
    '''For kw_args, see tables()'''
865
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
866

    
867
##### Heuristic queries
868

    
869
def put(db, table, row, pkey_=None, row_ct_ref=None):
870
    '''Recovers from errors.
871
    Only works under PostgreSQL (uses INSERT RETURNING).
872
    '''
873
    row = sql_gen.ColDict(db, table, row)
874
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
875
    
876
    try:
877
        cur = insert(db, table, row, pkey_, recover=True)
878
        if row_ct_ref != None and cur.rowcount >= 0:
879
            row_ct_ref[0] += cur.rowcount
880
        return value(cur)
881
    except DuplicateKeyException, e:
882
        return value(select(db, table, [pkey_],
883
            util.dict_subset_right_join(row, e.cols), recover=True))
884

    
885
def get(db, table, row, pkey, row_ct_ref=None, create=False):
886
    '''Recovers from errors'''
887
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
888
    except StopIteration:
889
        if not create: raise
890
        return put(db, table, row, pkey, row_ct_ref) # insert new row
891

    
892
def is_func_result(col):
893
    return col.table.name.find('(') >= 0 and col.name == 'result'
894

    
895
def into_table_name(out_table, in_tables0, mapping, is_func):
896
    def in_col_str(in_col):
897
        in_col = sql_gen.remove_col_rename(in_col)
898
        if isinstance(in_col, sql_gen.Col):
899
            table = in_col.table
900
            if table == in_tables0:
901
                in_col = sql_gen.to_name_only_col(in_col)
902
            elif is_func_result(in_col): in_col = table # omit col name
903
        return str(in_col)
904
    
905
    str_ = str(out_table)
906
    if is_func:
907
        str_ += '('
908
        
909
        try: value_in_col = mapping['value']
910
        except KeyError:
911
            str_ += ', '.join((k+'='+in_col_str(v)
912
                for k, v in mapping.iteritems()))
913
        else: str_ += in_col_str(value_in_col)
914
        
915
        str_ += ')'
916
    else: str_ += '_pkeys'
917
    return str_
918

    
919
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
920
    default=None, is_func=False):
921
    '''Recovers from errors.
922
    Only works under PostgreSQL (uses INSERT RETURNING).
923
    @param in_tables The main input table to select from, followed by a list of
924
        tables to join with it using the main input table's pkey
925
    @param mapping dict(out_table_col=in_table_col, ...)
926
        * out_table_col: str (*not* sql_gen.Col)
927
        * in_table_col: sql_gen.Col|literal-value
928
    @param into The table to contain the output and input pkeys.
929
        Defaults to `out_table.name+'_pkeys'`.
930
    @param default The *output* column to use as the pkey for missing rows.
931
        If this output column does not exist in the mapping, uses None.
932
    @param is_func Whether out_table is the name of a SQL function, not a table
933
    @return sql_gen.Col Where the output pkeys are made available
934
    '''
935
    out_table = sql_gen.as_Table(out_table)
936
    mapping = sql_gen.ColDict(db, out_table, mapping)
937
    
938
    def log_debug(msg): db.log_debug(msg, level=1.5)
939
    def col_ustr(str_):
940
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
941
    
942
    log_debug('********** New iteration **********')
943
    log_debug('Inserting these input columns into '+strings.as_tt(
944
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
945
    
946
    # Create input joins from list of input tables
947
    in_tables_ = in_tables[:] # don't modify input!
948
    in_tables0 = in_tables_.pop(0) # first table is separate
949
    in_pkey = pkey(db, in_tables0, recover=True)
950
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
951
    input_joins = [in_tables0]+[sql_gen.Join(v,
952
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
953
    
954
    if into == None:
955
        into = into_table_name(out_table, in_tables0, mapping, is_func)
956
    into = sql_gen.as_Table(into)
957
    
958
    log_debug('Joining together input tables into temp table')
959
    # Place in new table for speed and so don't modify input if values edited
960
    in_table = sql_gen.Table('in')
961
    flatten_cols = filter(sql_gen.is_table_col, mapping.values())
962
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins,
963
        flatten_cols, preserve=[in_pkey_col], start=0))
964
    input_joins = [in_table]
965
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
966
    
967
    # Resolve default value column
968
    try: default = mapping[default]
969
    except KeyError:
970
        if default != None:
971
            db.log_debug('Default value column '
972
                +strings.as_tt(strings.repr_no_u(default))
973
                +' does not exist in mapping, falling back to None', level=2.1)
974
            default = None
975
    
976
    out_pkey = pkey(db, out_table, recover=True)
977
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
978
    
979
    pkeys_names = [in_pkey, out_pkey]
980
    pkeys_cols = [in_pkey_col, out_pkey_col]
981
    
982
    pkeys_table_exists_ref = [False]
983
    def insert_into_pkeys(joins, cols):
984
        query, params = mk_select(db, joins, cols, order_by=None, start=0)
985
        if pkeys_table_exists_ref[0]:
986
            insert_select(db, into, pkeys_names, query, params)
987
        else:
988
            run_query_into(db, query, params, into=into)
989
            pkeys_table_exists_ref[0] = True
990
    
991
    limit_ref = [None]
992
    conds = set()
993
    distinct_on = []
994
    def mk_main_select(joins, cols):
995
        return mk_select(db, joins, cols, conds, distinct_on,
996
            limit=limit_ref[0], start=0)
997
    
998
    exc_strs = set()
999
    def log_exc(e):
1000
        e_str = exc.str_(e, first_line_only=True)
1001
        log_debug('Caught exception: '+e_str)
1002
        assert e_str not in exc_strs # avoid infinite loops
1003
        exc_strs.add(e_str)
1004
    def remove_all_rows():
1005
        log_debug('Returning NULL for all rows')
1006
        limit_ref[0] = 0 # just create an empty pkeys table
1007
    def ignore(in_col, value):
1008
        in_col_str = strings.as_tt(repr(in_col))
1009
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
1010
            level=2.5)
1011
        add_index(db, in_col)
1012
        log_debug('Ignoring rows with '+in_col_str+' = '
1013
            +strings.as_tt(repr(value)))
1014
    def remove_rows(in_col, value):
1015
        ignore(in_col, value)
1016
        cond = (in_col, sql_gen.CompareCond(value, '!='))
1017
        assert cond not in conds # avoid infinite loops
1018
        conds.add(cond)
1019
    def invalid2null(in_col, value):
1020
        ignore(in_col, value)
1021
        update(db, in_table, [(in_col, None)],
1022
            sql_gen.ColValueCond(in_col, value))
1023
    
1024
    def insert_pkeys_table(which):
1025
        return sql_gen.Table(sql_gen.add_suffix(in_table.name,
1026
            '_insert_'+which+'_pkeys'))
1027
    insert_out_pkeys = insert_pkeys_table('out')
1028
    insert_in_pkeys = insert_pkeys_table('in')
1029
    
1030
    # Do inserts and selects
1031
    join_cols = sql_gen.ColDict(db, out_table)
1032
    while True:
1033
        if limit_ref[0] == 0: # special case
1034
            log_debug('Creating an empty pkeys table')
1035
            cur = run_query_into(db, *mk_select(db, out_table, [out_pkey],
1036
                limit=limit_ref[0]), into=insert_out_pkeys)
1037
            break # don't do main case
1038
        
1039
        has_joins = join_cols != {}
1040
        
1041
        # Prepare to insert new rows
1042
        insert_joins = input_joins[:] # don't modify original!
1043
        insert_args = dict(recover=True, cacheable=False)
1044
        if has_joins:
1045
            distinct_on = [v.to_Col() for v in join_cols.values()]
1046
            insert_joins.append(sql_gen.Join(out_table, join_cols,
1047
                sql_gen.filter_out))
1048
        else:
1049
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1050
        main_select = mk_main_select(insert_joins, mapping.values())[0]
1051
        
1052
        log_debug('Trying to insert new rows')
1053
        try:
1054
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1055
                **insert_args)
1056
            break # insert successful
1057
        except DuplicateKeyException, e:
1058
            log_exc(e)
1059
            
1060
            old_join_cols = join_cols.copy()
1061
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1062
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1063
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1064
            assert join_cols != old_join_cols # avoid infinite loops
1065
        except NullValueException, e:
1066
            log_exc(e)
1067
            
1068
            out_col, = e.cols
1069
            try: in_col = mapping[out_col]
1070
            except KeyError:
1071
                log_debug('Missing mapping for NOT NULL column '+out_col)
1072
                remove_all_rows()
1073
            else: remove_rows(in_col, None)
1074
        except FunctionValueException, e:
1075
            log_exc(e)
1076
            
1077
            func_name = e.name
1078
            value = e.value
1079
            for out_col, in_col in mapping.iteritems():
1080
                invalid2null(sql_gen.unwrap_func_call(in_col, func_name), value)
1081
        except MissingCastException, e:
1082
            log_exc(e)
1083
            
1084
            out_col = e.col
1085
            mapping[out_col] = sql_gen.wrap_in_func(e.type, mapping[out_col])
1086
        except DatabaseErrors, e:
1087
            log_exc(e)
1088
            
1089
            msg = 'No handler for exception: '+exc.str_(e)
1090
            warnings.warn(DbWarning(msg))
1091
            log_debug(msg)
1092
            remove_all_rows()
1093
        # after exception handled, rerun loop with additional constraints
1094
    
1095
    if row_ct_ref != None and cur.rowcount >= 0:
1096
        row_ct_ref[0] += cur.rowcount
1097
    
1098
    if has_joins:
1099
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1100
        log_debug('Getting output table pkeys of existing/inserted rows')
1101
        insert_into_pkeys(select_joins, pkeys_cols)
1102
    else:
1103
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1104
        
1105
        log_debug('Getting input table pkeys of inserted rows')
1106
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
1107
            into=insert_in_pkeys)
1108
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1109
        
1110
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1111
            insert_in_pkeys)
1112
        
1113
        log_debug('Combining output and input pkeys in inserted order')
1114
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1115
            {row_num_col: sql_gen.join_same_not_null})]
1116
        insert_into_pkeys(pkey_joins, pkeys_names)
1117
    
1118
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1119
    add_pkey(db, into)
1120
    
1121
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1122
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1123
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1124
        # must use join_same_not_null or query will take forever
1125
    insert_into_pkeys(missing_rows_joins,
1126
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1127
    
1128
    assert table_row_count(db, into) == table_row_count(db, in_table)
1129
    
1130
    return sql_gen.Col(out_pkey, into)
1131

    
1132
##### Data cleanup
1133

    
1134
def cleanup_table(db, table, cols):
1135
    def esc_name_(name): return esc_name(db, name)
1136
    
1137
    table = sql_gen.as_Table(table).to_str(db)
1138
    cols = map(esc_name_, cols)
1139
    
1140
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
1141
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
1142
            for col in cols))),
1143
        dict(null0='', null1=r'\N'))
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