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# Database access
2

    
3
import copy
4
import operator
5
import re
6
import warnings
7

    
8
import exc
9
import dicts
10
import iters
11
import lists
12
from Proxy import Proxy
13
import rand
14
import sql_gen
15
import strings
16
import util
17

    
18
##### Exceptions
19

    
20
def get_cur_query(cur, input_query=None, input_params=None):
21
    raw_query = None
22
    if hasattr(cur, 'query'): raw_query = cur.query
23
    elif hasattr(cur, '_last_executed'): raw_query = cur._last_executed
24
    
25
    if raw_query != None: return raw_query
26
    else: return '[input] '+strings.ustr(input_query)+' % '+repr(input_params)
27

    
28
def _add_cursor_info(e, *args, **kw_args):
29
    '''For params, see get_cur_query()'''
30
    exc.add_msg(e, 'query: '+str(get_cur_query(*args, **kw_args)))
31

    
32
class DbException(exc.ExceptionWithCause):
33
    def __init__(self, msg, cause=None, cur=None):
34
        exc.ExceptionWithCause.__init__(self, msg, cause, cause_newline=True)
35
        if cur != None: _add_cursor_info(self, cur)
36

    
37
class ExceptionWithName(DbException):
38
    def __init__(self, name, cause=None):
39
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name)), cause)
40
        self.name = name
41

    
42
class ExceptionWithNameValue(DbException):
43
    def __init__(self, name, value, cause=None):
44
        DbException.__init__(self, 'for name: '+strings.as_tt(str(name))
45
            +'; value: '+strings.as_tt(repr(value)), cause)
46
        self.name = name
47
        self.value = value
48

    
49
class ConstraintException(DbException):
50
    def __init__(self, name, cols, cause=None):
51
        DbException.__init__(self, 'Violated '+strings.as_tt(name)
52
            +' constraint on columns: '+strings.as_tt(', '.join(cols)), cause)
53
        self.name = name
54
        self.cols = cols
55

    
56
class MissingCastException(DbException):
57
    def __init__(self, type_, col, cause=None):
58
        DbException.__init__(self, 'Missing cast to type '+strings.as_tt(type_)
59
            +' on column: '+strings.as_tt(col), cause)
60
        self.type = type_
61
        self.col = col
62

    
63
class NameException(DbException): pass
64

    
65
class DuplicateKeyException(ConstraintException): pass
66

    
67
class NullValueException(ConstraintException): pass
68

    
69
class FunctionValueException(ExceptionWithNameValue): pass
70

    
71
class DuplicateTableException(ExceptionWithName): pass
72

    
73
class DuplicateFunctionException(ExceptionWithName): pass
74

    
75
class EmptyRowException(DbException): pass
76

    
77
##### Warnings
78

    
79
class DbWarning(UserWarning): pass
80

    
81
##### Result retrieval
82

    
83
def col_names(cur): return (col[0] for col in cur.description)
84

    
85
def rows(cur): return iter(lambda: cur.fetchone(), None)
86

    
87
def consume_rows(cur):
88
    '''Used to fetch all rows so result will be cached'''
89
    iters.consume_iter(rows(cur))
90

    
91
def next_row(cur): return rows(cur).next()
92

    
93
def row(cur):
94
    row_ = next_row(cur)
95
    consume_rows(cur)
96
    return row_
97

    
98
def next_value(cur): return next_row(cur)[0]
99

    
100
def value(cur): return row(cur)[0]
101

    
102
def values(cur): return iters.func_iter(lambda: next_value(cur))
103

    
104
def value_or_none(cur):
105
    try: return value(cur)
106
    except StopIteration: return None
107

    
108
##### Input validation
109

    
110
def esc_name_by_module(module, name):
111
    if module == 'psycopg2' or module == None: quote = '"'
112
    elif module == 'MySQLdb': quote = '`'
113
    else: raise NotImplementedError("Can't escape name for "+module+' database')
114
    return sql_gen.esc_name(name, quote)
115

    
116
def esc_name_by_engine(engine, name, **kw_args):
117
    return esc_name_by_module(db_engines[engine][0], name, **kw_args)
118

    
119
def esc_name(db, name, **kw_args):
120
    return esc_name_by_module(util.root_module(db.db), name, **kw_args)
121

    
122
def qual_name(db, schema, table):
123
    def esc_name_(name): return esc_name(db, name)
124
    table = esc_name_(table)
125
    if schema != None: return esc_name_(schema)+'.'+table
126
    else: return table
127

    
128
##### Database connections
129

    
130
db_config_names = ['engine', 'host', 'user', 'password', 'database', 'schemas']
131

    
132
db_engines = {
133
    'MySQL': ('MySQLdb', {'password': 'passwd', 'database': 'db'}),
134
    'PostgreSQL': ('psycopg2', {}),
135
}
136

    
137
DatabaseErrors_set = set([DbException])
138
DatabaseErrors = tuple(DatabaseErrors_set)
139

    
140
def _add_module(module):
141
    DatabaseErrors_set.add(module.DatabaseError)
142
    global DatabaseErrors
143
    DatabaseErrors = tuple(DatabaseErrors_set)
144

    
145
def db_config_str(db_config):
146
    return db_config['engine']+' database '+db_config['database']
147

    
148
def _query_lookup(query, params): return (query, dicts.make_hashable(params))
149

    
150
log_debug_none = lambda msg, level=2: None
151

    
152
class DbConn:
153
    def __init__(self, db_config, serializable=True, autocommit=False,
154
        caching=True, log_debug=log_debug_none):
155
        self.db_config = db_config
156
        self.serializable = serializable
157
        self.autocommit = autocommit
158
        self.caching = caching
159
        self.log_debug = log_debug
160
        self.debug = log_debug != log_debug_none
161
        
162
        self.__db = None
163
        self.query_results = {}
164
        self._savepoint = 0
165
    
166
    def __getattr__(self, name):
167
        if name == '__dict__': raise Exception('getting __dict__')
168
        if name == 'db': return self._db()
169
        else: raise AttributeError()
170
    
171
    def __getstate__(self):
172
        state = copy.copy(self.__dict__) # shallow copy
173
        state['log_debug'] = None # don't pickle the debug callback
174
        state['_DbConn__db'] = None # don't pickle the connection
175
        return state
176
    
177
    def connected(self): return self.__db != None
178
    
179
    def _db(self):
180
        if self.__db == None:
181
            # Process db_config
182
            db_config = self.db_config.copy() # don't modify input!
183
            schemas = db_config.pop('schemas', None)
184
            module_name, mappings = db_engines[db_config.pop('engine')]
185
            module = __import__(module_name)
186
            _add_module(module)
187
            for orig, new in mappings.iteritems():
188
                try: util.rename_key(db_config, orig, new)
189
                except KeyError: pass
190
            
191
            # Connect
192
            self.__db = module.connect(**db_config)
193
            
194
            # Configure connection
195
            if self.serializable and not self.autocommit: run_raw_query(self,
196
                'SET TRANSACTION ISOLATION LEVEL SERIALIZABLE')
197
            if schemas != None:
198
                schemas_ = ''.join((esc_name(self, s)+', '
199
                    for s in schemas.split(',')))
200
                run_raw_query(self, "SELECT set_config('search_path', \
201
%s || current_setting('search_path'), false)", [schemas_])
202
        
203
        return self.__db
204
    
205
    class DbCursor(Proxy):
206
        def __init__(self, outer):
207
            Proxy.__init__(self, outer.db.cursor())
208
            self.outer = outer
209
            self.query_results = outer.query_results
210
            self.query_lookup = None
211
            self.result = []
212
        
213
        def execute(self, query, params=None):
214
            self._is_insert = query.upper().find('INSERT') >= 0
215
            self.query_lookup = _query_lookup(query, params)
216
            try:
217
                try:
218
                    return_value = self.inner.execute(query, params)
219
                    self.outer.do_autocommit()
220
                finally: self.query = get_cur_query(self.inner, query, params)
221
            except Exception, e:
222
                _add_cursor_info(e, self, query, params)
223
                self.result = e # cache the exception as the result
224
                self._cache_result()
225
                raise
226
            # Fetch all rows so result will be cached
227
            if self.rowcount == 0 and not self._is_insert: consume_rows(self)
228
            return return_value
229
        
230
        def fetchone(self):
231
            row = self.inner.fetchone()
232
            if row != None: self.result.append(row)
233
            # otherwise, fetched all rows
234
            else: self._cache_result()
235
            return row
236
        
237
        def _cache_result(self):
238
            # For inserts, only cache exceptions since inserts are not
239
            # idempotent, but an invalid insert will always be invalid
240
            if self.query_results != None and (not self._is_insert
241
                or isinstance(self.result, Exception)):
242
                
243
                assert self.query_lookup != None
244
                self.query_results[self.query_lookup] = self.CacheCursor(
245
                    util.dict_subset(dicts.AttrsDictView(self),
246
                    ['query', 'result', 'rowcount', 'description']))
247
        
248
        class CacheCursor:
249
            def __init__(self, cached_result): self.__dict__ = cached_result
250
            
251
            def execute(self, *args, **kw_args):
252
                if isinstance(self.result, Exception): raise self.result
253
                # otherwise, result is a rows list
254
                self.iter = iter(self.result)
255
            
256
            def fetchone(self):
257
                try: return self.iter.next()
258
                except StopIteration: return None
259
    
260
    def esc_value(self, value):
261
        try: str_ = self.mogrify('%s', [value])
262
        except NotImplementedError, e:
263
            module = util.root_module(self.db)
264
            if module == 'MySQLdb':
265
                import _mysql
266
                str_ = _mysql.escape_string(value)
267
            else: raise e
268
        return strings.to_unicode(str_)
269
    
270
    def esc_name(self, name): return esc_name(self, name) # calls global func
271
    
272
    def mogrify(self, query, params=None):
273
        module = util.root_module(self.db)
274
        if module == 'psycopg2': return self.db.cursor().mogrify(query, params)
275
        else: raise NotImplementedError("Can't mogrify query for "+module
276
            +' database')
277
    
278
    def run_query(self, query, params=None, cacheable=False, log_level=2,
279
        debug_msg_ref=None):
280
        '''
281
        @param log_ignore_excs The log_level will be increased by 2 if the query
282
            throws one of these exceptions.
283
        @param debug_msg_ref If specified, the log message will be returned in
284
            this instead of being output. This allows you to filter log messages
285
            depending on the result of the query.
286
        '''
287
        assert query != None
288
        
289
        if not self.caching: cacheable = False
290
        used_cache = False
291
        
292
        def log_msg(query):
293
            if used_cache: cache_status = 'cache hit'
294
            elif cacheable: cache_status = 'cache miss'
295
            else: cache_status = 'non-cacheable'
296
            return 'DB query: '+cache_status+':\n'+strings.as_code(query, 'SQL')
297
        
298
        try:
299
            # Get cursor
300
            if cacheable:
301
                query_lookup = _query_lookup(query, params)
302
                try:
303
                    cur = self.query_results[query_lookup]
304
                    used_cache = True
305
                except KeyError: cur = self.DbCursor(self)
306
            else: cur = self.db.cursor()
307
            
308
            # Log query
309
            if self.debug and debug_msg_ref == None: # log before running
310
                self.log_debug(log_msg(query), log_level)
311
            
312
            # Run query
313
            cur.execute(query, params)
314
        finally:
315
            if self.debug and debug_msg_ref != None: # return after running
316
                debug_msg_ref[0] = log_msg(str(get_cur_query(cur, query,
317
                    params)))
318
        
319
        return cur
320
    
321
    def is_cached(self, query, params=None):
322
        return _query_lookup(query, params) in self.query_results
323
    
324
    def with_savepoint(self, func):
325
        savepoint = 'level_'+str(self._savepoint)
326
        self.run_query('SAVEPOINT '+savepoint, log_level=4)
327
        self._savepoint += 1
328
        try: 
329
            try: return_val = func()
330
            finally:
331
                self._savepoint -= 1
332
                assert self._savepoint >= 0
333
        except:
334
            self.run_query('ROLLBACK TO SAVEPOINT '+savepoint, log_level=4)
335
            raise
336
        else:
337
            self.run_query('RELEASE SAVEPOINT '+savepoint, log_level=4)
338
            self.do_autocommit()
339
            return return_val
340
    
341
    def do_autocommit(self):
342
        '''Autocommits if outside savepoint'''
343
        assert self._savepoint >= 0
344
        if self.autocommit and self._savepoint == 0:
345
            self.log_debug('Autocommiting')
346
            self.db.commit()
347
    
348
    def col_default(self, col):
349
        table = sql_gen.Table('columns', 'information_schema')
350
        
351
        conds = [('table_name', col.table.name), ('column_name', col.name)]
352
        schema = col.table.schema
353
        if schema != None: conds.append(('table_schema', schema))
354
        
355
        return sql_gen.as_Code(value(select(self, table, ['column_default'],
356
            conds, order_by='table_schema', limit=1, log_level=3)))
357
            # TODO: order_by search_path schema order
358

    
359
connect = DbConn
360

    
361
##### Querying
362

    
363
def run_raw_query(db, *args, **kw_args):
364
    '''For params, see DbConn.run_query()'''
365
    return db.run_query(*args, **kw_args)
366

    
367
def mogrify(db, query, params):
368
    module = util.root_module(db.db)
369
    if module == 'psycopg2': return db.db.cursor().mogrify(query, params)
370
    else: raise NotImplementedError("Can't mogrify query for "+module+
371
        ' database')
372

    
373
##### Recoverable querying
374

    
375
def with_savepoint(db, func): return db.with_savepoint(func)
376

    
377
def run_query(db, query, params=None, recover=None, cacheable=False,
378
    log_level=2, log_ignore_excs=None, **kw_args):
379
    '''For params, see run_raw_query()'''
380
    if recover == None: recover = False
381
    if log_ignore_excs == None: log_ignore_excs = ()
382
    log_ignore_excs = tuple(log_ignore_excs)
383
    
384
    debug_msg_ref = [None]
385
    try:
386
        try:
387
            def run(): return run_raw_query(db, query, params, cacheable,
388
                log_level, debug_msg_ref, **kw_args)
389
            if recover and not db.is_cached(query, params):
390
                return with_savepoint(db, run)
391
            else: return run() # don't need savepoint if cached
392
        except Exception, e:
393
            if not recover: raise # need savepoint to run index_cols()
394
            msg = exc.str_(e)
395
            
396
            match = re.search(r'duplicate key value violates unique constraint '
397
                r'"((_?[^\W_]+)_.+?)"', msg)
398
            if match:
399
                constraint, table = match.groups()
400
                try: cols = index_cols(db, table, constraint)
401
                except NotImplementedError: raise e
402
                else: raise DuplicateKeyException(constraint, cols, e)
403
            
404
            match = re.search(r'null value in column "(.+?)" violates not-null'
405
                r' constraint', msg)
406
            if match: raise NullValueException('NOT NULL', [match.group(1)], e)
407
            
408
            match = re.search(r'\b(?:invalid input (?:syntax|value)\b.*?'
409
                r'|date/time field value out of range): "(.+?)"\n'
410
                r'(?:(?s).*?)\bfunction "(.+?)"', msg)
411
            if match:
412
                value, name = match.groups()
413
                raise FunctionValueException(name, strings.to_unicode(value), e)
414
            
415
            match = re.search(r'column "(.+?)" is of type (.+?) but expression '
416
                r'is of type', msg)
417
            if match:
418
                col, type_ = match.groups()
419
                raise MissingCastException(type_, col, e)
420
            
421
            match = re.search(r'relation "(.+?)" already exists', msg)
422
            if match: raise DuplicateTableException(match.group(1), e)
423
            
424
            match = re.search(r'function "(.+?)" already exists', msg)
425
            if match: raise DuplicateFunctionException(match.group(1), e)
426
            
427
            raise # no specific exception raised
428
    except log_ignore_excs:
429
        log_level += 2
430
        raise
431
    finally:
432
        if debug_msg_ref[0] != None: db.log_debug(debug_msg_ref[0], log_level)
433

    
434
##### Basic queries
435

    
436
def next_version(name):
437
    version = 1 # first existing name was version 0
438
    match = re.match(r'^(.*)#(\d+)$', name)
439
    if match:
440
        name, version = match.groups()
441
        version = int(version)+1
442
    return sql_gen.add_suffix(name, '#'+str(version))
443

    
444
def run_query_into(db, query, params, into=None, *args, **kw_args):
445
    '''Outputs a query to a temp table.
446
    For params, see run_query().
447
    '''
448
    if into == None: return run_query(db, query, params, *args, **kw_args)
449
    else: # place rows in temp table
450
        assert isinstance(into, sql_gen.Table)
451
        
452
        kw_args['recover'] = True
453
        kw_args.setdefault('log_ignore_excs', (DuplicateTableException,))
454
        
455
        temp = not db.autocommit # tables are permanent in autocommit mode
456
        # "temporary tables cannot specify a schema name", so remove schema
457
        if temp: into.schema = None
458
        
459
        while True:
460
            try:
461
                create_query = 'CREATE'
462
                if temp: create_query += ' TEMP'
463
                create_query += ' TABLE '+into.to_str(db)+' AS\n'+query
464
                
465
                return run_query(db, create_query, params, *args, **kw_args)
466
                    # CREATE TABLE AS sets rowcount to # rows in query
467
            except DuplicateTableException, e:
468
                into.name = next_version(into.name)
469
                # try again with next version of name
470

    
471
order_by_pkey = object() # tells mk_select() to order by the pkey
472

    
473
distinct_on_all = object() # tells mk_select() to SELECT DISTINCT ON all columns
474

    
475
def mk_select(db, tables, fields=None, conds=None, distinct_on=[], limit=None,
476
    start=None, order_by=order_by_pkey, default_table=None):
477
    '''
478
    @param tables The single table to select from, or a list of tables to join
479
        together, with tables after the first being sql_gen.Join objects
480
    @param fields Use None to select all fields in the table
481
    @param conds WHERE conditions: [(compare_left_side, compare_right_side),...]
482
        * container can be any iterable type
483
        * compare_left_side: sql_gen.Code|str (for col name)
484
        * compare_right_side: sql_gen.ValueCond|literal value
485
    @param distinct_on The columns to SELECT DISTINCT ON, or distinct_on_all to
486
        use all columns
487
    @return tuple(query, params)
488
    '''
489
    # Parse tables param
490
    if not lists.is_seq(tables): tables = [tables]
491
    tables = list(tables) # don't modify input! (list() copies input)
492
    table0 = sql_gen.as_Table(tables.pop(0)) # first table is separate
493
    
494
    # Parse other params
495
    if conds == None: conds = []
496
    elif dicts.is_dict(conds): conds = conds.items()
497
    conds = list(conds) # don't modify input! (list() copies input)
498
    assert limit == None or type(limit) == int
499
    assert start == None or type(start) == int
500
    if order_by is order_by_pkey:
501
        if distinct_on != []: order_by = None
502
        else: order_by = pkey(db, table0, recover=True)
503
    
504
    query = 'SELECT'
505
    
506
    def parse_col(col): return sql_gen.as_Col(col, default_table).to_str(db)
507
    
508
    # DISTINCT ON columns
509
    if distinct_on != []:
510
        query += '\nDISTINCT'
511
        if distinct_on is not distinct_on_all:
512
            query += ' ON ('+(', '.join(map(parse_col, distinct_on)))+')'
513
    
514
    # Columns
515
    query += '\n'
516
    if fields == None: query += '*'
517
    else: query += '\n, '.join(map(parse_col, fields))
518
    
519
    # Main table
520
    query += '\nFROM '+table0.to_str(db)
521
    
522
    # Add joins
523
    left_table = table0
524
    for join_ in tables:
525
        table = join_.table
526
        
527
        # Parse special values
528
        if join_.type_ is sql_gen.filter_out: # filter no match
529
            conds.append((sql_gen.Col(table_not_null_col(db, table), table),
530
                None))
531
        
532
        query += '\n'+join_.to_str(db, left_table)
533
        
534
        left_table = table
535
    
536
    missing = True
537
    if conds != []:
538
        if len(conds) == 1: whitespace = ' '
539
        else: whitespace = '\n'
540
        query += '\n'+sql_gen.combine_conds([sql_gen.ColValueCond(l, r)
541
            .to_str(db) for l, r in conds], 'WHERE')
542
        missing = False
543
    if order_by != None:
544
        query += '\nORDER BY '+sql_gen.as_Col(order_by, table0).to_str(db)
545
    if limit != None: query += '\nLIMIT '+str(limit); missing = False
546
    if start != None:
547
        if start != 0: query += '\nOFFSET '+str(start)
548
        missing = False
549
    if missing: warnings.warn(DbWarning(
550
        'SELECT statement missing a WHERE, LIMIT, or OFFSET clause: '+query))
551
    
552
    return (query, [])
553

    
554
def select(db, *args, **kw_args):
555
    '''For params, see mk_select() and run_query()'''
556
    recover = kw_args.pop('recover', None)
557
    cacheable = kw_args.pop('cacheable', True)
558
    log_level = kw_args.pop('log_level', 2)
559
    
560
    query, params = mk_select(db, *args, **kw_args)
561
    return run_query(db, query, params, recover, cacheable, log_level=log_level)
562

    
563
def mk_insert_select(db, table, cols=None, select_query=None, params=None,
564
    returning=None, embeddable=False):
565
    '''
566
    @param returning str|None An inserted column (such as pkey) to return
567
    @param embeddable Whether the query should be embeddable as a nested SELECT.
568
        Warning: If you set this and cacheable=True when the query is run, the
569
        query will be fully cached, not just if it raises an exception.
570
    '''
571
    table = sql_gen.as_Table(table)
572
    if cols == []: cols = None # no cols (all defaults) = unknown col names
573
    if cols != None:
574
        cols = [sql_gen.to_name_only_col(v, table).to_str(db) for v in cols]
575
    if select_query == None: select_query = 'DEFAULT VALUES'
576
    if returning != None: returning = sql_gen.as_Col(returning, table)
577
    
578
    # Build query
579
    first_line = 'INSERT INTO '+table.to_str(db)
580
    query = first_line
581
    if cols != None: query += '\n('+', '.join(cols)+')'
582
    query += '\n'+select_query
583
    
584
    if returning != None:
585
        returning_name = copy.copy(returning)
586
        returning_name.table = None
587
        returning_name = returning_name.to_str(db)
588
        query += '\nRETURNING '+returning_name
589
    
590
    if embeddable:
591
        assert returning != None
592
        
593
        # Create function
594
        function_name = sql_gen.clean_name(first_line)
595
        return_type = 'SETOF '+returning.to_str(db)+'%TYPE'
596
        while True:
597
            try:
598
                func_schema = None
599
                if not db.autocommit: func_schema = 'pg_temp'
600
                function = sql_gen.Table(function_name, func_schema).to_str(db)
601
                
602
                function_query = '''\
603
CREATE FUNCTION '''+function+'''()
604
RETURNS '''+return_type+'''
605
LANGUAGE sql
606
AS $$
607
'''+mogrify(db, query, params)+''';
608
$$;
609
'''
610
                run_query(db, function_query, recover=True, cacheable=True,
611
                    log_ignore_excs=(DuplicateFunctionException,))
612
                break # this version was successful
613
            except DuplicateFunctionException, e:
614
                function_name = next_version(function_name)
615
                # try again with next version of name
616
        
617
        # Return query that uses function
618
        func_table = sql_gen.NamedTable('f', sql_gen.CustomCode(function+'()'),
619
            [returning_name]) # AS clause requires function alias
620
        return mk_select(db, func_table, start=0, order_by=None)
621
    
622
    return (query, params)
623

    
624
def insert_select(db, *args, **kw_args):
625
    '''For params, see mk_insert_select() and run_query_into()
626
    @param into sql_gen.Table with suggested name of temp table to put RETURNING
627
        values in
628
    '''
629
    into = kw_args.pop('into', None)
630
    if into != None: kw_args['embeddable'] = True
631
    recover = kw_args.pop('recover', None)
632
    cacheable = kw_args.pop('cacheable', True)
633
    
634
    query, params = mk_insert_select(db, *args, **kw_args)
635
    return run_query_into(db, query, params, into, recover=recover,
636
        cacheable=cacheable)
637

    
638
default = object() # tells insert() to use the default value for a column
639

    
640
def insert(db, table, row, *args, **kw_args):
641
    '''For params, see insert_select()'''
642
    if lists.is_seq(row): cols = None
643
    else:
644
        cols = row.keys()
645
        row = row.values()
646
    row = list(row) # ensure that "!= []" works
647
    
648
    # Check for special values
649
    labels = []
650
    values = []
651
    for value in row:
652
        value = sql_gen.remove_col_rename(sql_gen.as_Value(value)).value
653
        if value is default: labels.append('DEFAULT')
654
        else:
655
            labels.append('%s')
656
            values.append(value)
657
    
658
    # Build query
659
    if values != []: query = 'VALUES ('+(', '.join(labels))+')'
660
    else: query = None
661
    
662
    return insert_select(db, table, cols, query, values, *args, **kw_args)
663

    
664
def mk_update(db, table, changes=None, cond=None):
665
    '''
666
    @param changes [(col, new_value),...]
667
        * container can be any iterable type
668
        * col: sql_gen.Code|str (for col name)
669
        * new_value: sql_gen.Code|literal value
670
    @param cond sql_gen.Code WHERE condition. e.g. use sql_gen.*Cond objects.
671
    @return str query
672
    '''
673
    query = 'UPDATE '+sql_gen.as_Table(table).to_str(db)+'\nSET\n'
674
    query += ',\n'.join((sql_gen.to_name_only_col(col, table).to_str(db)+' = '
675
        +sql_gen.as_Value(new_value).to_str(db) for col, new_value in changes))
676
    if cond != None: query += '\nWHERE\n'+cond.to_str(db)
677
    
678
    return query
679

    
680
def update(db, *args, **kw_args):
681
    '''For params, see mk_update() and run_query()'''
682
    recover = kw_args.pop('recover', None)
683
    
684
    return run_query(db, mk_update(db, *args, **kw_args), [], recover)
685

    
686
def last_insert_id(db):
687
    module = util.root_module(db.db)
688
    if module == 'psycopg2': return value(run_query(db, 'SELECT lastval()'))
689
    elif module == 'MySQLdb': return db.insert_id()
690
    else: return None
691

    
692
def truncate(db, table, schema='public'):
693
    return run_query(db, 'TRUNCATE '+qual_name(db, schema, table)+' CASCADE')
694

    
695
def mk_flatten_mapping(db, into, cols, preserve=[], as_items=False):
696
    '''Creates a mapping from original column names (which may have collisions)
697
    to names that will be distinct among the columns' tables.
698
    This is meant to be used for several tables that are being joined together.
699
    @param cols The columns to combine. Duplicates will be removed.
700
    @param into The table for the new columns.
701
    @param preserve [sql_gen.Col...] Columns not to rename. Note that these
702
        columns will be included in the mapping even if they are not in cols.
703
        The tables of the provided Col objects will be changed to into, so make
704
        copies of them if you want to keep the original tables.
705
    @param as_items Whether to return a list of dict items instead of a dict
706
    @return dict(orig_col=new_col, ...)
707
        * orig_col: sql_gen.Col(orig_col_name, orig_table)
708
        * new_col: sql_gen.Col(orig_col_name, into)
709
        * All mappings use the into table so its name can easily be
710
          changed for all columns at once
711
    '''
712
    cols = lists.uniqify(cols)
713
    
714
    items = []
715
    for col in preserve:
716
        orig_col = copy.copy(col)
717
        col.table = into
718
        items.append((orig_col, col))
719
    preserve = set(preserve)
720
    for col in cols:
721
        if col not in preserve: items.append((col, sql_gen.Col(str(col), into)))
722
    
723
    if not as_items: items = dict(items)
724
    return items
725

    
726
def flatten(db, into, joins, cols, limit=None, start=None, **kw_args):
727
    '''For params, see mk_flatten_mapping()
728
    @return See return value of mk_flatten_mapping()
729
    '''
730
    items = mk_flatten_mapping(db, into, cols, as_items=True, **kw_args)
731
    cols = [sql_gen.NamedCol(new.name, old) for old, new in items]
732
    run_query_into(db, *mk_select(db, joins, cols, limit=limit, start=start),
733
        into=into)
734
    return dict(items)
735

    
736
##### Database structure queries
737

    
738
def table_row_count(db, table, recover=None):
739
    return value(run_query(db, *mk_select(db, table, [sql_gen.row_count],
740
        order_by=None, start=0), recover=recover, log_level=3))
741

    
742
def table_cols(db, table, recover=None):
743
    return list(col_names(select(db, table, limit=0, order_by=None,
744
        recover=recover, log_level=4)))
745

    
746
def pkey(db, table, recover=None):
747
    '''Assumed to be first column in table'''
748
    return table_cols(db, table, recover)[0]
749

    
750
not_null_col = 'not_null_col'
751

    
752
def table_not_null_col(db, table, recover=None):
753
    '''Name assumed to be the value of not_null_col. If not found, uses pkey.'''
754
    if not_null_col in table_cols(db, table, recover): return not_null_col
755
    else: return pkey(db, table, recover)
756

    
757
def index_cols(db, table, index):
758
    '''Can also use this for UNIQUE constraints, because a UNIQUE index is
759
    automatically created. When you don't know whether something is a UNIQUE
760
    constraint or a UNIQUE index, use this function.'''
761
    module = util.root_module(db.db)
762
    if module == 'psycopg2':
763
        return list(values(run_query(db, '''\
764
SELECT attname
765
FROM
766
(
767
        SELECT attnum, attname
768
        FROM pg_index
769
        JOIN pg_class index ON index.oid = indexrelid
770
        JOIN pg_class table_ ON table_.oid = indrelid
771
        JOIN pg_attribute ON attrelid = indrelid AND attnum = ANY (indkey)
772
        WHERE
773
            table_.relname = %(table)s
774
            AND index.relname = %(index)s
775
    UNION
776
        SELECT attnum, attname
777
        FROM
778
        (
779
            SELECT
780
                indrelid
781
                , (regexp_matches(indexprs, E':varattno (\\\\d+)', 'g'))[1]::int
782
                    AS indkey
783
            FROM pg_index
784
            JOIN pg_class index ON index.oid = indexrelid
785
            JOIN pg_class table_ ON table_.oid = indrelid
786
            WHERE
787
                table_.relname = %(table)s
788
                AND index.relname = %(index)s
789
        ) s
790
        JOIN pg_attribute ON attrelid = indrelid AND attnum = indkey
791
) s
792
ORDER BY attnum
793
''',
794
            {'table': table, 'index': index}, cacheable=True, log_level=4)))
795
    else: raise NotImplementedError("Can't list index columns for "+module+
796
        ' database')
797

    
798
def constraint_cols(db, table, constraint):
799
    module = util.root_module(db.db)
800
    if module == 'psycopg2':
801
        return list(values(run_query(db, '''\
802
SELECT attname
803
FROM pg_constraint
804
JOIN pg_class ON pg_class.oid = conrelid
805
JOIN pg_attribute ON attrelid = conrelid AND attnum = ANY (conkey)
806
WHERE
807
    relname = %(table)s
808
    AND conname = %(constraint)s
809
ORDER BY attnum
810
''',
811
            {'table': table, 'constraint': constraint})))
812
    else: raise NotImplementedError("Can't list constraint columns for "+module+
813
        ' database')
814

    
815
row_num_col = '_row_num'
816

    
817
def add_index(db, expr):
818
    '''Adds an index on a column or expression if it doesn't already exist.
819
    Currently, only function calls are supported as expressions.
820
    '''
821
    expr = copy.copy(expr) # don't modify input!
822
    
823
    # Extract col
824
    if isinstance(expr, sql_gen.FunctionCall):
825
        col = expr.args[0]
826
        expr = sql_gen.Expr(expr)
827
    else: col = expr
828
    assert sql_gen.is_table_col(col)
829
    
830
    index = sql_gen.as_Table(str(expr))
831
    table = col.table
832
    col.table = None
833
    try: run_query(db, 'CREATE INDEX '+index.to_str(db)+' ON '+table.to_str(db)
834
        +' ('+expr.to_str(db)+')', recover=True, cacheable=True, log_level=3)
835
    except DuplicateTableException: pass # index already existed
836

    
837
def add_pkey(db, table, recover=None):
838
    '''Makes the first column in a table the primary key.
839
    @pre The table must not already have a primary key.
840
    '''
841
    table = sql_gen.as_Table(table)
842
    
843
    index = sql_gen.as_Table(sql_gen.add_suffix(table.name, '_pkey'))
844
    col = sql_gen.to_name_only_col(pkey(db, table, recover))
845
    try:
846
        run_query(db, 'ALTER TABLE '+table.to_str(db)+' ADD CONSTRAINT '
847
            +index.to_str(db)+' PRIMARY KEY('+col.to_str(db)+')',
848
            recover=True, cacheable=True, log_level=3,
849
            log_ignore_excs=(DuplicateTableException,))
850
    except DuplicateTableException, e:
851
        index.name = next_version(index.name)
852
        # try again with next version of name
853

    
854
def add_row_num(db, table):
855
    '''Adds a row number column to a table. Its name is in row_num_col. It will
856
    be the primary key.'''
857
    table = sql_gen.as_Table(table).to_str(db)
858
    run_query(db, 'ALTER TABLE '+table+' ADD COLUMN '+row_num_col
859
        +' serial NOT NULL PRIMARY KEY', log_level=3)
860

    
861
def tables(db, schema_like='public', table_like='%'):
862
    module = util.root_module(db.db)
863
    params = {'schema_like': schema_like, 'table_like': table_like}
864
    if module == 'psycopg2':
865
        return values(run_query(db, '''\
866
SELECT tablename
867
FROM pg_tables
868
WHERE
869
    schemaname LIKE %(schema_like)s
870
    AND tablename LIKE %(table_like)s
871
ORDER BY tablename
872
''',
873
            params, cacheable=True))
874
    elif module == 'MySQLdb':
875
        return values(run_query(db, 'SHOW TABLES LIKE %(table_like)s', params,
876
            cacheable=True))
877
    else: raise NotImplementedError("Can't list tables for "+module+' database')
878

    
879
##### Database management
880

    
881
def empty_db(db, schema='public', **kw_args):
882
    '''For kw_args, see tables()'''
883
    for table in tables(db, schema, **kw_args): truncate(db, table, schema)
884

    
885
##### Heuristic queries
886

    
887
def put(db, table, row, pkey_=None, row_ct_ref=None):
888
    '''Recovers from errors.
889
    Only works under PostgreSQL (uses INSERT RETURNING).
890
    '''
891
    row = sql_gen.ColDict(db, table, row)
892
    if pkey_ == None: pkey_ = pkey(db, table, recover=True)
893
    
894
    try:
895
        cur = insert(db, table, row, pkey_, recover=True)
896
        if row_ct_ref != None and cur.rowcount >= 0:
897
            row_ct_ref[0] += cur.rowcount
898
        return value(cur)
899
    except DuplicateKeyException, e:
900
        row = sql_gen.ColDict(db, table,
901
            util.dict_subset_right_join(row, e.cols))
902
        return value(select(db, table, [pkey_], row, recover=True))
903

    
904
def get(db, table, row, pkey, row_ct_ref=None, create=False):
905
    '''Recovers from errors'''
906
    try: return value(select(db, table, [pkey], row, limit=1, recover=True))
907
    except StopIteration:
908
        if not create: raise
909
        return put(db, table, row, pkey, row_ct_ref) # insert new row
910

    
911
def is_func_result(col):
912
    return col.table.name.find('(') >= 0 and col.name == 'result'
913

    
914
def into_table_name(out_table, in_tables0, mapping, is_func):
915
    def in_col_str(in_col):
916
        in_col = sql_gen.remove_col_rename(in_col)
917
        if isinstance(in_col, sql_gen.Col):
918
            table = in_col.table
919
            if table == in_tables0:
920
                in_col = sql_gen.to_name_only_col(in_col)
921
            elif is_func_result(in_col): in_col = table # omit col name
922
        return str(in_col)
923
    
924
    str_ = str(out_table)
925
    if is_func:
926
        str_ += '('
927
        
928
        try: value_in_col = mapping['value']
929
        except KeyError:
930
            str_ += ', '.join((str(k)+'='+in_col_str(v)
931
                for k, v in mapping.iteritems()))
932
        else: str_ += in_col_str(value_in_col)
933
        
934
        str_ += ')'
935
    else: str_ += '_pkeys'
936
    return str_
937

    
938
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
939
    default=None, is_func=False):
940
    '''Recovers from errors.
941
    Only works under PostgreSQL (uses INSERT RETURNING).
942
    @param in_tables The main input table to select from, followed by a list of
943
        tables to join with it using the main input table's pkey
944
    @param mapping dict(out_table_col=in_table_col, ...)
945
        * out_table_col: str (*not* sql_gen.Col)
946
        * in_table_col: sql_gen.Col|literal-value
947
    @param into The table to contain the output and input pkeys.
948
        Defaults to `out_table.name+'_pkeys'`.
949
    @param default The *output* column to use as the pkey for missing rows.
950
        If this output column does not exist in the mapping, uses None.
951
    @param is_func Whether out_table is the name of a SQL function, not a table
952
    @return sql_gen.Col Where the output pkeys are made available
953
    '''
954
    out_table = sql_gen.as_Table(out_table)
955
    
956
    def log_debug(msg): db.log_debug(msg, level=1.5)
957
    def col_ustr(str_):
958
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
959
    
960
    log_debug('********** New iteration **********')
961
    log_debug('Inserting these input columns into '+strings.as_tt(
962
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
963
    
964
    # Create input joins from list of input tables
965
    in_tables_ = in_tables[:] # don't modify input!
966
    in_tables0 = in_tables_.pop(0) # first table is separate
967
    in_pkey = pkey(db, in_tables0, recover=True)
968
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
969
    input_joins = [in_tables0]+[sql_gen.Join(v,
970
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
971
    
972
    if into == None:
973
        into = into_table_name(out_table, in_tables0, mapping, is_func)
974
    into = sql_gen.as_Table(into)
975
    
976
    log_debug('Joining together input tables into temp table')
977
    # Place in new table for speed and so don't modify input if values edited
978
    in_table = sql_gen.Table('in')
979
    flatten_cols = filter(sql_gen.is_table_col, mapping.values())
980
    mapping = dicts.join(mapping, flatten(db, in_table, input_joins,
981
        flatten_cols, preserve=[in_pkey_col], start=0))
982
    input_joins = [in_table]
983
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
984
    
985
    mapping = sql_gen.ColDict(db, out_table, mapping)
986
        # after applying dicts.join() because that returns a plain dict
987
    
988
    # Resolve default value column
989
    try: default = mapping[default]
990
    except KeyError:
991
        if default != None:
992
            db.log_debug('Default value column '
993
                +strings.as_tt(strings.repr_no_u(default))
994
                +' does not exist in mapping, falling back to None', level=2.1)
995
            default = None
996
    
997
    out_pkey = pkey(db, out_table, recover=True)
998
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
999
    
1000
    pkeys_names = [in_pkey, out_pkey]
1001
    pkeys_cols = [in_pkey_col, out_pkey_col]
1002
    
1003
    pkeys_table_exists_ref = [False]
1004
    def insert_into_pkeys(joins, cols):
1005
        query, params = mk_select(db, joins, cols, order_by=None, start=0)
1006
        if pkeys_table_exists_ref[0]:
1007
            insert_select(db, into, pkeys_names, query, params)
1008
        else:
1009
            run_query_into(db, query, params, into=into)
1010
            pkeys_table_exists_ref[0] = True
1011
    
1012
    limit_ref = [None]
1013
    conds = set()
1014
    distinct_on = []
1015
    def mk_main_select(joins, cols):
1016
        return mk_select(db, joins, cols, conds, distinct_on,
1017
            limit=limit_ref[0], start=0)
1018
    
1019
    exc_strs = set()
1020
    def log_exc(e):
1021
        e_str = exc.str_(e, first_line_only=True)
1022
        log_debug('Caught exception: '+e_str)
1023
        assert e_str not in exc_strs # avoid infinite loops
1024
        exc_strs.add(e_str)
1025
    def remove_all_rows():
1026
        log_debug('Returning NULL for all rows')
1027
        limit_ref[0] = 0 # just create an empty pkeys table
1028
    def ignore(in_col, value):
1029
        in_col_str = strings.as_tt(repr(in_col))
1030
        db.log_debug('Adding index on '+in_col_str+' to enable fast filtering',
1031
            level=2.5)
1032
        add_index(db, in_col)
1033
        log_debug('Ignoring rows with '+in_col_str+' = '
1034
            +strings.as_tt(repr(value)))
1035
    def remove_rows(in_col, value):
1036
        ignore(in_col, value)
1037
        cond = (in_col, sql_gen.CompareCond(value, '!='))
1038
        assert cond not in conds # avoid infinite loops
1039
        conds.add(cond)
1040
    def invalid2null(in_col, value):
1041
        ignore(in_col, value)
1042
        update(db, in_table, [(in_col, None)],
1043
            sql_gen.ColValueCond(in_col, value))
1044
    
1045
    def insert_pkeys_table(which):
1046
        return sql_gen.Table(sql_gen.add_suffix(in_table.name,
1047
            '_insert_'+which+'_pkeys'))
1048
    insert_out_pkeys = insert_pkeys_table('out')
1049
    insert_in_pkeys = insert_pkeys_table('in')
1050
    
1051
    # Do inserts and selects
1052
    join_cols = sql_gen.ColDict(db, out_table)
1053
    while True:
1054
        if limit_ref[0] == 0: # special case
1055
            log_debug('Creating an empty pkeys table')
1056
            cur = run_query_into(db, *mk_select(db, out_table, [out_pkey],
1057
                limit=limit_ref[0]), into=insert_out_pkeys)
1058
            break # don't do main case
1059
        
1060
        has_joins = join_cols != {}
1061
        
1062
        # Prepare to insert new rows
1063
        insert_joins = input_joins[:] # don't modify original!
1064
        insert_args = dict(recover=True, cacheable=False)
1065
        if has_joins:
1066
            distinct_on = [v.to_Col() for v in join_cols.values()]
1067
            insert_joins.append(sql_gen.Join(out_table, join_cols,
1068
                sql_gen.filter_out))
1069
        else:
1070
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
1071
        main_select = mk_main_select(insert_joins, mapping.values())[0]
1072
        
1073
        log_debug('Trying to insert new rows')
1074
        try:
1075
            cur = insert_select(db, out_table, mapping.keys(), main_select,
1076
                **insert_args)
1077
            break # insert successful
1078
        except DuplicateKeyException, e:
1079
            log_exc(e)
1080
            
1081
            old_join_cols = join_cols.copy()
1082
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
1083
            log_debug('Ignoring existing rows, comparing on these columns:\n'
1084
                +strings.as_inline_table(join_cols, ustr=col_ustr))
1085
            assert join_cols != old_join_cols # avoid infinite loops
1086
        except NullValueException, e:
1087
            log_exc(e)
1088
            
1089
            out_col, = e.cols
1090
            try: in_col = mapping[out_col]
1091
            except KeyError:
1092
                log_debug('Missing mapping for NOT NULL column '+out_col)
1093
                remove_all_rows()
1094
            else: remove_rows(in_col, None)
1095
        except FunctionValueException, e:
1096
            log_exc(e)
1097
            
1098
            func_name = e.name
1099
            value = e.value
1100
            for out_col, in_col in mapping.iteritems():
1101
                invalid2null(sql_gen.unwrap_func_call(in_col, func_name), value)
1102
        except MissingCastException, e:
1103
            log_exc(e)
1104
            
1105
            out_col = e.col
1106
            mapping[out_col] = sql_gen.wrap_in_func(e.type, mapping[out_col])
1107
        except DatabaseErrors, e:
1108
            log_exc(e)
1109
            
1110
            msg = 'No handler for exception: '+exc.str_(e)
1111
            warnings.warn(DbWarning(msg))
1112
            log_debug(msg)
1113
            remove_all_rows()
1114
        # after exception handled, rerun loop with additional constraints
1115
    
1116
    if row_ct_ref != None and cur.rowcount >= 0:
1117
        row_ct_ref[0] += cur.rowcount
1118
    
1119
    if has_joins:
1120
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
1121
        log_debug('Getting output table pkeys of existing/inserted rows')
1122
        insert_into_pkeys(select_joins, pkeys_cols)
1123
    else:
1124
        add_row_num(db, insert_out_pkeys) # for joining with input pkeys
1125
        
1126
        log_debug('Getting input table pkeys of inserted rows')
1127
        run_query_into(db, *mk_main_select(input_joins, [in_pkey]),
1128
            into=insert_in_pkeys)
1129
        add_row_num(db, insert_in_pkeys) # for joining with output pkeys
1130
        
1131
        assert table_row_count(db, insert_out_pkeys) == table_row_count(db,
1132
            insert_in_pkeys)
1133
        
1134
        log_debug('Combining output and input pkeys in inserted order')
1135
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
1136
            {row_num_col: sql_gen.join_same_not_null})]
1137
        insert_into_pkeys(pkey_joins, pkeys_names)
1138
    
1139
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
1140
    add_pkey(db, into)
1141
    
1142
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
1143
    missing_rows_joins = input_joins+[sql_gen.Join(into,
1144
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
1145
        # must use join_same_not_null or query will take forever
1146
    insert_into_pkeys(missing_rows_joins,
1147
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
1148
    
1149
    assert table_row_count(db, into) == table_row_count(db, in_table)
1150
    
1151
    return sql_gen.Col(out_pkey, into)
1152

    
1153
##### Data cleanup
1154

    
1155
def cleanup_table(db, table, cols):
1156
    def esc_name_(name): return esc_name(db, name)
1157
    
1158
    table = sql_gen.as_Table(table).to_str(db)
1159
    cols = map(esc_name_, cols)
1160
    
1161
    run_query(db, 'UPDATE '+table+' SET\n'+(',\n'.join(('\n'+col
1162
        +' = nullif(nullif(trim(both from '+col+"), %(null0)s), %(null1)s)"
1163
            for col in cols))),
1164
        dict(null0='', null1=r'\N'))
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