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# Database import/export
2

    
3
import exc
4
import dicts
5
import sql
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import sql_gen
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import strings
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import util
9

    
10
##### Data cleanup
11

    
12
def cleanup_table(db, table, cols):
13
    table = sql_gen.as_Table(table)
14
    cols = map(sql_gen.as_Col, cols)
15
    
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    expr = ('nullif(nullif(trim(both from %s), '+db.esc_value('')+'), '
17
        +db.esc_value(r'\N')+')')
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    changes = [(v, sql_gen.CustomCode(expr % v.to_str(db)))
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        for v in cols]
20
    
21
    sql.update(db, table, changes, in_place=True)
22

    
23
##### Error tracking
24

    
25
def track_data_error(db, errors_table, cols, value, error_code, error):
26
    '''
27
    @param errors_table If None, does nothing.
28
    '''
29
    if errors_table == None or cols == (): return
30
    
31
    for col in cols:
32
        try:
33
            sql.insert(db, errors_table, dict(column=col.name, value=value,
34
                error_code=error_code, error=error), recover=True,
35
                cacheable=True, log_level=4)
36
        except sql.DuplicateKeyException: pass
37

    
38
def cast(db, type_, col, errors_table=None):
39
    '''Casts an (unrenamed) column or value.
40
    If errors_table set and col has srcs, saves errors in errors_table (using
41
    col's srcs attr as the source columns) and converts errors to warnings.
42
    @param col str|sql_gen.Col|sql_gen.Literal
43
    @param errors_table None|sql_gen.Table|str
44
    '''
45
    col = sql_gen.as_Col(col)
46
    
47
    # Don't convert exceptions to warnings for user-supplied constants
48
    if isinstance(col, sql_gen.Literal): return sql_gen.Cast(type_, col)
49
    
50
    assert not isinstance(col, sql_gen.NamedCol)
51
    
52
    save_errors = (errors_table != None and isinstance(col, sql_gen.Col)
53
        and col.srcs != ())
54
    function_name = type_
55
    if save_errors:
56
        errors_table = sql_gen.as_Table(errors_table)
57
        
58
        srcs = map(sql_gen.to_name_only_col, col.srcs)
59
        function_name = str(sql_gen.FunctionCall(function_name, *srcs))
60
    function = db.TempFunction(function_name)
61
    
62
    while True:
63
        # Create function definition
64
        query = '''\
65
CREATE FUNCTION '''+function.to_str(db)+'''(value text)
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RETURNS '''+type_+'''
67
LANGUAGE plpgsql
68
'''
69
        if not save_errors: query += 'IMMUTABLE '
70
        query += '''\
71
STRICT
72
AS $$
73
BEGIN
74
    /* The explicit cast to the return type is needed to make the cast happen
75
    inside the try block. (Implicit casts to the return type happen at the end
76
    of the function, outside any block.) */
77
    RETURN value::'''+type_+''';
78
EXCEPTION
79
    WHEN data_exception THEN
80
'''
81
        if save_errors:
82
            errors_table_cols = map(sql_gen.Col,
83
                ['column', 'value', 'error_code', 'error'])
84
            query += '''\
85
        -- Save error in errors table.
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        DECLARE
87
            error_code text := SQLSTATE;
88
            error text := SQLERRM;
89
            "column" text;
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        BEGIN
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            -- Insert the value and error for *each* source column.
92
            FOR "column" IN
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'''+sql.mk_select(db, sql_gen.NamedValues('c', None, [[c.name] for c in srcs]),
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    order_by=None, start=0)+'''
95
            LOOP
96
                BEGIN
97
'''+sql.mk_insert_select(db, errors_table, errors_table_cols,
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    sql_gen.Values(errors_table_cols).to_str(db))+''';
99
                EXCEPTION
100
                    WHEN unique_violation THEN NULL; -- continue to next row
101
                END;
102
            END LOOP;
103
        END;
104
        
105
'''
106
        query += '''\
107
        RAISE WARNING '%', SQLERRM;
108
        RETURN NULL;
109
END;
110
$$;
111
'''
112
        
113
        # Create function
114
        try:
115
            sql.run_query(db, query, recover=True, cacheable=True,
116
                log_ignore_excs=(sql.DuplicateException,))
117
            break # successful
118
        except sql.DuplicateException:
119
            function.name = sql.next_version(function.name)
120
            # try again with next version of name
121
    
122
    return sql_gen.FunctionCall(function, col)
123

    
124
def cast_temp_col(db, type_, col, errors_table=None):
125
    '''Like cast(), but creates a new column with the cast values if the input
126
    is a column.
127
    @return The new column or cast value
128
    '''
129
    def cast_(col): return cast(db, type_, col, errors_table)
130
    
131
    try: col = sql_gen.underlying_col(col)
132
    except sql_gen.NoUnderlyingTableException: return sql_gen.wrap(cast_, col)
133
    
134
    table = col.table
135
    new_col = sql_gen.suffixed_col(col, '::'+strings.first_word(type_))
136
    expr = cast_(col)
137
    
138
    # Add column
139
    new_typed_col = sql_gen.TypedCol(new_col.name, type_)
140
    sql.add_col(db, table, new_typed_col, comment=repr(col)+'::'+type_)
141
    new_col.name = new_typed_col.name # propagate any renaming
142
    
143
    sql.update(db, table, [(new_col, expr)], in_place=True, recover=True)
144
    
145
    return new_col
146

    
147
def errors_table(db, table, if_exists=True):
148
    '''
149
    @param if_exists If set, returns None if the errors table doesn't exist
150
    @return None|sql_gen.Table
151
    '''
152
    table = sql_gen.as_Table(table)
153
    if table.srcs != (): table = table.srcs[0]
154
    
155
    errors_table = sql_gen.suffixed_table(table, '.errors')
156
    if if_exists and not sql.table_exists(db, errors_table): return None
157
    return errors_table
158

    
159
##### Import
160

    
161
def put(db, table, row, pkey_=None, row_ct_ref=None):
162
    '''Recovers from errors.
163
    Only works under PostgreSQL (uses INSERT RETURNING).
164
    '''
165
    row = sql_gen.ColDict(db, table, row)
166
    if pkey_ == None: pkey_ = sql.pkey(db, table, recover=True)
167
    
168
    try:
169
        cur = sql.insert(db, table, row, pkey_, recover=True, log_level=3.5)
170
        if row_ct_ref != None and cur.rowcount >= 0:
171
            row_ct_ref[0] += cur.rowcount
172
        return sql.value(cur)
173
    except sql.DuplicateKeyException, e:
174
        row = sql_gen.ColDict(db, table,
175
            util.dict_subset_right_join(row, e.cols))
176
        return sql.value(sql.select(db, table, [pkey_], row, recover=True,
177
            log_level=3.5))
178

    
179
def get(db, table, row, pkey, row_ct_ref=None, create=False):
180
    '''Recovers from errors'''
181
    try:
182
        return sql.value(sql.select(db, table, [pkey], row, limit=1,
183
            recover=True))
184
    except StopIteration:
185
        if not create: raise
186
        return put(db, table, row, pkey, row_ct_ref) # insert new row
187

    
188
def is_func_result(col):
189
    return col.table.name.find('(') >= 0 and col.name == 'result'
190

    
191
def into_table_name(out_table, in_tables0, mapping, is_func):
192
    def in_col_str(in_col):
193
        in_col = sql_gen.remove_col_rename(in_col)
194
        if isinstance(in_col, sql_gen.Col):
195
            table = in_col.table
196
            if table == in_tables0:
197
                in_col = sql_gen.to_name_only_col(in_col)
198
            elif is_func_result(in_col): in_col = table # omit col name
199
        return str(in_col)
200
    
201
    str_ = str(out_table)
202
    if is_func:
203
        str_ += '('
204
        
205
        try: value_in_col = mapping['value']
206
        except KeyError:
207
            str_ += ', '.join((str(k)+'='+in_col_str(v)
208
                for k, v in mapping.iteritems()))
209
        else: str_ += in_col_str(value_in_col)
210
        
211
        str_ += ')'
212
    else:
213
        out_col = 'rank'
214
        try: in_col = mapping[out_col]
215
        except KeyError: str_ += '_pkeys'
216
        else: # has a rank column, so hierarchical
217
            str_ += '['+str(out_col)+'='+in_col_str(in_col)+']'
218
    return str_
219

    
220
def put_table(db, out_table, in_tables, mapping, row_ct_ref=None, into=None,
221
    default=None, is_func=False, on_error=exc.raise_):
222
    '''Recovers from errors.
223
    Only works under PostgreSQL (uses INSERT RETURNING).
224
    IMPORTANT: Must be run at the *beginning* of a transaction.
225
    @param in_tables The main input table to select from, followed by a list of
226
        tables to join with it using the main input table's pkey
227
    @param mapping dict(out_table_col=in_table_col, ...)
228
        * out_table_col: str (*not* sql_gen.Col)
229
        * in_table_col: sql_gen.Col|literal-value
230
    @param into The table to contain the output and input pkeys.
231
        Defaults to `out_table.name+'_pkeys'`.
232
    @param default The *output* column to use as the pkey for missing rows.
233
        If this output column does not exist in the mapping, uses None.
234
    @param is_func Whether out_table is the name of a SQL function, not a table
235
    @return sql_gen.Col Where the output pkeys are made available
236
    '''
237
    out_table = sql_gen.as_Table(out_table)
238
    
239
    def log_debug(msg): db.log_debug(msg, level=1.5)
240
    def col_ustr(str_):
241
        return strings.repr_no_u(sql_gen.remove_col_rename(str_))
242
    
243
    log_debug('********** New iteration **********')
244
    log_debug('Inserting these input columns into '+strings.as_tt(
245
        out_table.to_str(db))+':\n'+strings.as_table(mapping, ustr=col_ustr))
246
    
247
    is_function = sql.function_exists(db, out_table)
248
    
249
    if is_function: out_pkey = 'result'
250
    else: out_pkey = sql.pkey(db, out_table, recover=True)
251
    out_pkey_col = sql_gen.as_Col(out_pkey, out_table)
252
    
253
    if mapping == {}: # need at least one column for INSERT SELECT
254
        mapping = {out_pkey: None} # ColDict will replace with default value
255
    
256
    # Create input joins from list of input tables
257
    in_tables_ = in_tables[:] # don't modify input!
258
    in_tables0 = in_tables_.pop(0) # first table is separate
259
    errors_table_ = errors_table(db, in_tables0)
260
    in_pkey = sql.pkey(db, in_tables0, recover=True)
261
    in_pkey_col = sql_gen.as_Col(in_pkey, in_tables0)
262
    input_joins = [in_tables0]+[sql_gen.Join(v,
263
        {in_pkey: sql_gen.join_same_not_null}) for v in in_tables_]
264
    
265
    if into == None:
266
        into = into_table_name(out_table, in_tables0, mapping, is_func)
267
    into = sql_gen.as_Table(into)
268
    
269
    # Set column sources
270
    in_cols = filter(sql_gen.is_table_col, mapping.values())
271
    for col in in_cols:
272
        if col.table == in_tables0: col.set_srcs(sql_gen.src_self)
273
    
274
    log_debug('Joining together input tables into temp table')
275
    # Place in new table for speed and so don't modify input if values edited
276
    in_table = sql_gen.Table('in')
277
    mapping = dicts.join(mapping, sql.flatten(db, in_table, input_joins,
278
        in_cols, preserve=[in_pkey_col], start=0))
279
    input_joins = [in_table]
280
    db.log_debug('Temp table: '+strings.as_tt(in_table.to_str(db)), level=2)
281
    
282
    mapping = sql_gen.ColDict(db, out_table, mapping)
283
        # after applying dicts.join() because that returns a plain dict
284
    
285
    # Resolve default value column
286
    if default != None:
287
        try: default = mapping[default]
288
        except KeyError:
289
            db.log_debug('Default value column '
290
                +strings.as_tt(strings.repr_no_u(default))
291
                +' does not exist in mapping, falling back to None', level=2.1)
292
            default = None
293
    
294
    pkeys_names = [in_pkey, out_pkey]
295
    pkeys_cols = [in_pkey_col, out_pkey_col]
296
    
297
    pkeys_table_exists_ref = [False]
298
    def insert_into_pkeys(joins, cols, distinct=False):
299
        kw_args = {}
300
        if distinct: kw_args.update(dict(distinct_on=[in_pkey_col]))
301
        query = sql.mk_select(db, joins, cols, order_by=None, start=0,
302
            **kw_args)
303
        
304
        if pkeys_table_exists_ref[0]:
305
            sql.insert_select(db, into, pkeys_names, query)
306
        else:
307
            sql.run_query_into(db, query, into=into)
308
            pkeys_table_exists_ref[0] = True
309
    
310
    limit_ref = [None]
311
    insert_in_table = in_table
312
    insert_in_tables = [insert_in_table]
313
    conds = set()
314
    distinct_on = sql_gen.ColDict(db, out_table)
315
    def mk_main_select(joins, cols):
316
        conds_ = [(sql_gen.with_table(k, insert_in_table), v) for k, v in conds]
317
        return sql.mk_select(db, joins, cols, conds_, limit=limit_ref[0],
318
            start=0)
319
    
320
    exc_strs = set()
321
    def log_exc(e):
322
        e_str = exc.str_(e, first_line_only=True)
323
        log_debug('Caught exception: '+e_str)
324
        assert e_str not in exc_strs # avoid infinite loops
325
        exc_strs.add(e_str)
326
    
327
    def remove_all_rows():
328
        log_debug('Ignoring all rows')
329
        limit_ref[0] = 0 # just create an empty pkeys table
330
    
331
    def ignore(in_col, value, e):
332
        track_data_error(db, errors_table_, in_col.srcs, value,
333
            e.cause.pgcode, e.cause.pgerror)
334
        log_debug('Ignoring rows with '+strings.as_tt(repr(in_col))+' = '
335
            +strings.as_tt(repr(value)))
336
    
337
    def remove_rows(in_col, value, e):
338
        ignore(in_col, value, e)
339
        cond = (in_col, sql_gen.CompareCond(value, '!='))
340
        assert cond not in conds # avoid infinite loops
341
        conds.add(cond)
342
    
343
    def invalid2null(in_col, value, e):
344
        ignore(in_col, value, e)
345
        sql.update(db, in_table, [(in_col, None)],
346
            sql_gen.ColValueCond(in_col, value))
347
    
348
    def insert_pkeys_table(which):
349
        return sql_gen.Table(sql_gen.concat(in_table.name,
350
            '_insert_'+which+'_pkeys'))
351
    insert_out_pkeys = insert_pkeys_table('out')
352
    insert_in_pkeys = insert_pkeys_table('in')
353
    
354
    # Do inserts and selects
355
    join_cols = sql_gen.ColDict(db, out_table)
356
    while True:
357
        if limit_ref[0] == 0: # special case
358
            log_debug('Creating an empty pkeys table')
359
            cur = sql.run_query_into(db, sql.mk_select(db, out_table,
360
                [out_pkey], limit=limit_ref[0]), into=insert_out_pkeys)
361
            break # don't do main case
362
        
363
        has_joins = join_cols != {}
364
        
365
        log_debug('Trying to insert new rows')
366
        
367
        # Prepare to insert new rows
368
        insert_args = dict(recover=True, cacheable=False)
369
        if has_joins:
370
            insert_args.update(dict(ignore=True))
371
        else:
372
            insert_args.update(dict(returning=out_pkey, into=insert_out_pkeys))
373
        main_select = mk_main_select([insert_in_table],
374
            [sql_gen.with_table(c, insert_in_table) for c in mapping.values()])
375
        
376
        def main_insert():
377
            if is_function:
378
                log_debug('Calling function on input rows')
379
                args = dict(((k.name, v) for k, v in mapping.iteritems()))
380
                func_call = sql_gen.NamedCol(out_pkey,
381
                    sql_gen.FunctionCall(out_table, **args))
382
                insert_into_pkeys(input_joins, [in_pkey_col, func_call])
383
                return None
384
            else:
385
                return sql.insert_select(db, out_table, mapping.keys(),
386
                    main_select, **insert_args)
387
        
388
        try:
389
            cur = sql.with_savepoint(db, main_insert)
390
            break # insert successful
391
        except sql.MissingCastException, e:
392
            log_exc(e)
393
            
394
            out_col = e.col
395
            type_ = e.type
396
            
397
            log_debug('Casting '+strings.as_tt(out_col)+' input to '
398
                +strings.as_tt(type_))
399
            in_col = mapping[out_col]
400
            while True:
401
                try:
402
                    mapping[out_col] = cast_temp_col(db, type_, in_col,
403
                        errors_table_)
404
                    break # cast successful
405
                except sql.InvalidValueException, e:
406
                    log_exc(e)
407
                    
408
                    invalid2null(in_col, e.value, e)
409
        except sql.DuplicateKeyException, e:
410
            log_exc(e)
411
            
412
            old_join_cols = join_cols.copy()
413
            distinct_on.update(util.dict_subset(mapping, e.cols))
414
            join_cols.update(util.dict_subset_right_join(mapping, e.cols))
415
            log_debug('Ignoring existing rows, comparing on these columns:\n'
416
                +strings.as_inline_table(join_cols, ustr=col_ustr))
417
            assert join_cols != old_join_cols # avoid infinite loops
418
            
419
            # Uniquify input table to avoid internal duplicate keys
420
            insert_in_table = sql.distinct_table(db, insert_in_table,
421
                filter(sql_gen.is_table_col, distinct_on.values()))
422
            insert_in_tables.append(insert_in_table)
423
        except sql.NullValueException, e:
424
            log_exc(e)
425
            
426
            out_col, = e.cols
427
            try: in_col = mapping[out_col]
428
            except KeyError:
429
                log_debug('Missing mapping for NOT NULL column '+out_col)
430
                remove_all_rows()
431
            else: remove_rows(in_col, None, e)
432
        except sql.DatabaseErrors, e:
433
            log_exc(e)
434
            
435
            log_debug('No handler for exception')
436
            on_error(e)
437
            remove_all_rows()
438
        # after exception handled, rerun loop with additional constraints
439
    
440
    if cur != None and row_ct_ref != None and cur.rowcount >= 0:
441
        row_ct_ref[0] += cur.rowcount
442
    
443
    if is_function: pass # pkeys table already created
444
    elif has_joins:
445
        select_joins = input_joins+[sql_gen.Join(out_table, join_cols)]
446
        log_debug('Getting output table pkeys of existing/inserted rows')
447
        insert_into_pkeys(select_joins, pkeys_cols, distinct=True)
448
    else:
449
        sql.add_row_num(db, insert_out_pkeys) # for joining with input pkeys
450
        
451
        log_debug('Getting input table pkeys of inserted rows')
452
        sql.run_query_into(db, mk_main_select(input_joins, [in_pkey]),
453
            into=insert_in_pkeys)
454
        sql.add_row_num(db, insert_in_pkeys) # for joining with output pkeys
455
        
456
        assert sql.table_row_count(db, insert_out_pkeys) == sql.table_row_count(
457
            db, insert_in_pkeys)
458
        
459
        log_debug('Combining output and input pkeys in inserted order')
460
        pkey_joins = [insert_in_pkeys, sql_gen.Join(insert_out_pkeys,
461
            {sql.row_num_col: sql_gen.join_same_not_null})]
462
        insert_into_pkeys(pkey_joins, pkeys_names)
463
        
464
        sql.empty_temp(db, [insert_out_pkeys, insert_in_pkeys])
465
    
466
    db.log_debug('Adding pkey on pkeys table to enable fast joins', level=2.5)
467
    sql.add_pkey(db, into)
468
    
469
    log_debug('Setting pkeys of missing rows to '+strings.as_tt(repr(default)))
470
    missing_rows_joins = input_joins+[sql_gen.Join(into,
471
        {in_pkey: sql_gen.join_same_not_null}, sql_gen.filter_out)]
472
        # must use join_same_not_null or query will take forever
473
    insert_into_pkeys(missing_rows_joins,
474
        [in_pkey_col, sql_gen.NamedCol(out_pkey, default)])
475
    
476
    assert sql.table_row_count(db, into) == sql.table_row_count(db, in_table)
477
    
478
    sql.empty_temp(db, insert_in_tables)
479
    
480
    srcs = []
481
    if is_func: srcs = sql_gen.cols_srcs(in_cols)
482
    return sql_gen.Col(out_pkey, into, srcs)
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