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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3546 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Full DB: Added vegbien.backup...
  bin 3573 over 12 years Aaron Marcuse-Kubitza src_map: Fixed bug where non-header rows needed...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 3573 over 12 years Aaron Marcuse-Kubitza src_map: Fixed bug where non-header rows needed...
  lib 3570 over 12 years Aaron Marcuse-Kubitza parallelproc.py: MultiProducerPool: Removed war...
  mappings 3568 over 12 years Aaron Marcuse-Kubitza Added mappings/roots for use in creating src maps
  schemas 3553 over 12 years Aaron Marcuse-Kubitza schemas/py_functions.sql: _date(): Raise (or pa...
  to_do 2547 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect the mont...
Makefile 10.4 KB 3393 over 12 years Aaron Marcuse-Kubitza Moved archived imports and make targets to main...
README.TXT 4.52 KB 3557 over 12 years Aaron Marcuse-Kubitza README.TXT: Datasource setup: Documented how to...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
3573 07/24/2012 05:46 AM Aaron Marcuse-Kubitza

src_map: Fixed bug where non-header rows needed to be materialized with empty fields for each column in the header

3572 07/24/2012 04:27 AM Aaron Marcuse-Kubitza

input.Makefile: Maps building: Via maps cleanup: Match maps/$(via).%.csv with pattern instead of $(viaMaps) var so that a non-existing via map will have the recipe run, too. When auto-creating via maps is later added, this will be required.

3571 07/24/2012 04:07 AM Aaron Marcuse-Kubitza

inputs/*/maps/src.*.csv: Regenerated using new src_map output format

3570 07/24/2012 04:06 AM Aaron Marcuse-Kubitza

parallelproc.py: MultiProducerPool: Removed warning if not using parallel processing because this also gets generated when it's explicitly turned off, which is currently the case and clutters up stderr when testing

3569 07/24/2012 03:57 AM Aaron Marcuse-Kubitza

src_map: Also add columns for the output mappings and comments, so that the src map can be directly copied for use as the via map (DwC.specimens.csv, etc.). The output mapping column name must be provided by the caller, which input.Makefile maps/src.%.csv provides using the new mappings roots.

3568 07/24/2012 03:52 AM Aaron Marcuse-Kubitza

Added mappings/roots for use in creating src maps

3567 07/24/2012 03:41 AM Aaron Marcuse-Kubitza

input.Makefile: Maps building: maps/src.%.csv: Clean up by passing through `$(bin)/cols '*'` whenever it's changed. This ensures that the CSV dialect is always consistently Python's Excel dialect. (Note that this dialect actually uses \r\n as the line ending. The \n line endings were from src maps generated by a previous version of bin/src_map.)

3566 07/24/2012 03:28 AM Aaron Marcuse-Kubitza

input.Makefile: Maps building: maps/$(via).%.full.csv: Removed alternate rule when $(srcMap) doesn't exist, because this effect is actually achieved by the no-prereqs rule for maps/src.%.csv, which causes make to think it exists when matching pattern rules even if its recipe doesn't actually create it

3565 07/24/2012 03:23 AM Aaron Marcuse-Kubitza

input.Makefile: Maps building: maps/$(via).%.full.csv: Added alternate rule when $(srcMap) doesn't exist

3564 07/24/2012 03:21 AM Aaron Marcuse-Kubitza

inputs/CTFS/maps/: Removed unneeded src.organisms.csv since there is an way to deal with it not existing in input.Makefile

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