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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3546 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Full DB: Added vegbien.backup...
  bin 3669 over 12 years Aaron Marcuse-Kubitza bin/map: Call sys.stdout.flush() after every ca...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 3679 over 12 years Aaron Marcuse-Kubitza mappings/VegX-VegBIEN.stems.csv: project: Mappe...
  lib 3677 over 12 years Aaron Marcuse-Kubitza db_xml.py: put(): Don't suppress exceptions thr...
  mappings 3679 over 12 years Aaron Marcuse-Kubitza mappings/VegX-VegBIEN.stems.csv: project: Mappe...
  schemas 3673 over 12 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 2547 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect the mont...
Makefile 10.4 KB 3393 over 12 years Aaron Marcuse-Kubitza Moved archived imports and make targets to main...
README.TXT 7.55 KB 3674 over 12 years Aaron Marcuse-Kubitza README.TXT: Documented that the PostgreSQL serv...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
3679 07/30/2012 01:51 PM Aaron Marcuse-Kubitza

mappings/VegX-VegBIEN.stems.csv: project: Mapped sourceaccessioncode. This entailed adding a distinguishing suffix to the projectname input mapping.

3678 07/30/2012 01:31 PM Aaron Marcuse-Kubitza

mappings/DwC2-VegBIEN.specimens.csv, VegX-VegBIEN.stems.csv: Removed all manual mappings to datasource_id now that datasource_id is auto-populated, both on the VegBIEN output side and the DwC/VegX input side. This should greatly simplify many of the mappings!

3677 07/30/2012 12:11 PM Aaron Marcuse-Kubitza

db_xml.py: put(): Don't suppress exceptions thrown by sql_io.put_table() by passing them to on_error(), because some exceptions indicate unrecoverable database connection problems such as a broken connection, which should abort the import

3676 07/30/2012 11:52 AM Aaron Marcuse-Kubitza

db_xml.py: put(): Support datasets with no rows, where root.firstChild == None. Documented that to use an entire XML document, you need to pass root.firstChild rather than root.

3675 07/30/2012 11:31 AM Aaron Marcuse-Kubitza

inputs/import.stats.xls: Updated with stats from latest import. Note that the import now includes CVS.

3674 07/30/2012 11:23 AM Aaron Marcuse-Kubitza

README.TXT: Documented that the PostgreSQL server should be restarted after installing system updates that may affect it, to avoid spurious errors that crash the import but go away upon reimport

3673 07/27/2012 11:12 PM Aaron Marcuse-Kubitza

Regenerated vegbien.ERD exports

3672 07/27/2012 11:10 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Fixed lines

3671 07/27/2012 11:08 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Synced with schema

3670 07/27/2012 10:51 PM Aaron Marcuse-Kubitza

bin/map: Call sys.stdout.flush() after every call to sys.stdout.write() to avoid interleaved stdout/stderr output due to stdout buffering

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