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Revision 3789

inputs/CTFS: Disabled maps because CTFS is not yet compatible with reversed XPaths, but the effort required to make it compatible is not worth including in the current commit. We lose only 2 test rows of test VegX data by doing this, since the full CTFS VegX files were never able to be imported.

View differences:

inputs/CTFS/maps/VegX.organisms.full.csv
1
CTFS[VegX]:/*s/individualOrganismObservation,VegX:/*s/individualOrganismObservation,Comments
2
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value,/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value
3
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name"
4
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit"
5
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name"
6
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=cl])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=cl])/tcs:Name"
7
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",
8
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",
9
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ord])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ord])/tcs:Name"
10
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name"
11
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=reg])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=reg])/tcs:Name"
12
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",
13
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ssp])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ssp])/tcs:Name"
14
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType"
15
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName"
16
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName"
17
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Name"
18
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Rank","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Rank"
19
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name"
20
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name"
21
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name"
22
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name"
23
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher,/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher
24
/*ID->/*s/individualOrganism/identificationLabel[@id=1],/*ID->/*s/individualOrganism/identificationLabel[@id=1]
25
/*ID->/*s/individualOrganism/identificationLabel[@id=2],/*ID->/*s/individualOrganism/identificationLabel[@id=2]
26
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium
27
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen
28
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph
29
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/phosphorus,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/phosphorus
30
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/potassium,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/potassium
31
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value
32
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value
33
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value
34
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value
35
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value
36
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value
37
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value
38
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value
39
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value
40
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value
41
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value
42
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value
43
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/commonName,/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/commonName
44
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/name,/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/name
45
/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=name],/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=name]
46
/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=sourceAccessionCode],/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=sourceAccessionCode]
47
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area
48
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters
49
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude
50
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude
51
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT
52
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumDepthInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumDepthInMeters
53
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters
54
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumDepthInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumDepthInMeters
55
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters
56
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation
57
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/landform,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/landform
58
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/locationNarrative,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/locationNarrative
59
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=continent]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=continent]/placeName
60
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName
61
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName
62
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName
63
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/note,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/note
64
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,
65
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,
66
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect
67
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient
68
/*ID->/*s/plotObservation/obsEndDate,/*ID->/*s/plotObservation/obsEndDate
69
/*ID->/*s/plotObservation/obsStartDate,/*ID->/*s/plotObservation/obsStartDate
70
/*ID->/*s/plotObservation/simpleUserdefined[name=method]/*ID/method/name,/*ID->/*s/plotObservation/simpleUserdefined[name=method]/*ID/method/name
71
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName
72
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier
73
/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value,/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value
74
/*ID->/*s/plotObservation/temperature,/*ID->/*s/plotObservation/temperature
75
/height,/height
76
/relativePlotPosition/relativeX,/relativePlotPosition/relativeX
77
/relativePlotPosition/relativeY,/relativePlotPosition/relativeY
78
/simpleUserdefined[name=authorPlantCode]/value,/simpleUserdefined[name=authorPlantCode]/value
79
/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,/simpleUserdefined[name=censusNo]/value,
80
/simpleUserdefined[name=collectionDate]/value,/simpleUserdefined[name=collectionDate]/value
81
/simpleUserdefined[name=growthForm]/value,/simpleUserdefined[name=growthForm]/value
82
/simpleUserdefined[name=height]/value,/simpleUserdefined[name=height]/value
83
/@id,/simpleUserdefined[name=sourceAccessionCode]/value,
84
/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent,/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent
85
/volumeCanopy/value,/volumeCanopy/value
86
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,
inputs/CTFS/maps/VegX.organisms.csv
1
CTFS[VegX]:/*s/individualOrganismObservation,VegX:/*s/individualOrganismObservation,Comments
2
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,
3
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,
4
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,
5
/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,/simpleUserdefined[name=censusNo]/value,
6
/@id,/simpleUserdefined[name=sourceAccessionCode]/value,
7
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",
8
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",
9
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",
inputs/CTFS/maps/VegBIEN.organisms.csv
1
CTFS[VegX]:/*s/individualOrganismObservation,VegBIEN:/plantobservation,Comments
2
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/area,
3
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/elevation/_alt/1,
4
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
5
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",
6
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",
7
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
8
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/landform,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/landform,
9
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/coordsaccuracy,
10
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/FootprintWKT,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/footprintgeometry_dwc,
11
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/latitude,
12
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/longitude,
13
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
14
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
15
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
16
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=continent]/placeName,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
17
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/locationNarrative,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative,
18
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/note,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/notespublic,
19
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/slopeaspect/_compass/value,
20
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/slopegradient,
21
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/1/_alt/1,
22
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/1/_alt/2,
23
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/2/_alt/1,
24
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/2/_alt/2,
25
/*ID->/*s/plotObservation/simpleUserdefined[name=method]/*ID/method/name,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/method/name,
26
/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=name],/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/project/projectname,
27
/*ID->/*s/plotObservation/*ID->/*s/project/title[@id=sourceAccessionCode],/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/project/sourceaccessioncode,
28
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/authorlocationcode,
29
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/commonName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
30
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/name,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
31
/*ID->/*s/plotObservation/obsEndDate,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/obsenddate,
32
/*ID->/*s/plotObservation/obsStartDate,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,
33
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,
34
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,
35
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/parent_id/locationevent/authorlocationcode,
36
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/parent_id/locationevent/sourceaccessioncode,
37
/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/precipitation,
38
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/acidity,
39
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/basesaturation,
40
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/calcium,
41
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/carbon,
42
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/cationexchangecapacity,
43
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/clay,
44
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/conductivity,
45
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/magnesium,
46
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/nitrogen,
47
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/organic,
48
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/ph,
49
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/phosphorus,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/phosphorus,
50
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/potassium,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/potassium,
51
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/sand,
52
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/silt,
53
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/sodium,
54
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/soilobs/texture,
55
/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/sourceaccessioncode,
56
/*ID->/*s/plotObservation/temperature,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/temperature,
57
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/maximumDepthInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",
58
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumDepthInMeters,"/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",
59
/simpleUserdefined[name=growthForm]/value,/*_id/aggregateoccurrence/*_id/taxonoccurrence/growthform,
60
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name",/*_id/aggregateoccurrence/*_id/taxonoccurrence/sourceaccessioncode/_alt/3,
61
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Rank","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",
62
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
63
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
64
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
65
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
66
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
67
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last",
68
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ssp])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
69
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit",/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
70
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first",
71
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
72
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
73
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
74
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
75
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ord])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
76
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=cl])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
77
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
78
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=reg])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
79
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName",/*_id/aggregateoccurrence/*_id/taxonoccurrence/verbatimcollectorname/_name/first,
80
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",/*_id/aggregateoccurrence/*_id/taxonoccurrence/verbatimcollectorname/_name/last,
81
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value,/*_id/aggregateoccurrence/count,
82
/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent,/*_id/aggregateoccurrence/cover,
83
/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,"/*_id/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
84
/volumeCanopy/value,/*_id/aggregateoccurrence/linecover,
85
/@id,/*_id:[@merge=1]/aggregateoccurrence:[@merge=1]/*_id:[@merge=1]/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _ifs"
86
/simpleUserdefined[name=authorPlantCode]/value,/*_id:[@merge=1]/aggregateoccurrence:[@merge=1]/*_id:[@merge=1]/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _ifs"
87
/simpleUserdefined[name=authorPlantCode]/value,/authorplantcode,"""{"" sorts it with other _ifs"
88
/height,/overallheight,
89
/simpleUserdefined[name=height]/value,/overallheight,
90
/@id,/sourceaccessioncode,"""{"" sorts it with other _ifs"
91
/*ID->/*s/individualOrganism/identificationLabel[@id=1],"/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
92
/*ID->/*s/individualOrganism/identificationLabel[@id=2],/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
93
/relativePlotPosition/relativeX,/stemobservation/xposition,
94
/relativePlotPosition/relativeY,/stemobservation/yposition,
95
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher,"/{.}/_if:[cond/_eq:[left/_ref[addr=""../../../../_ignore/voucherType""],right=direct]]/else/*_id:[@merge=1]/aggregateoccurrence:[@merge=1]/*_id/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc","""{.}"" sorts it with other _ifs"
96
/simpleUserdefined[name=collectionDate]/value,"/{.}/_if:[cond/_eq:[left/_ref[addr=""../../../../_ignore/voucherType""],right=direct]]/else/*_id:[@merge=1]/aggregateoccurrence:[@merge=1]/*_id/taxonoccurrence/voucher/*_id/specimenreplicate/collectiondate","""{.}"" sorts it with other _ifs"
97
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher,"/{.}/_if:[cond/_eq:[left/_ref[addr=""../../../../_ignore/voucherType""],right=direct]]/then/specimenreplicate/catalognumber_dwc","""{.}"" sorts it with other _ifs"
98
/simpleUserdefined[name=collectionDate]/value,"/{.}/_if:[cond/_eq:[left/_ref[addr=""../../../../_ignore/voucherType""],right=direct]]/then/specimenreplicate/collectiondate","""{.}"" sorts it with other _ifs"
99
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType",/{.}/_ignore/voucherType,"""{"" sorts it after what uses it, so the _ignore is executed after the _refs"
100
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,** No input mapping for /*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID ** 
inputs/CTFS/maps/VegBIEN.organisms.csv.disabled
1
CTFS:,VegBIEN:/plantobservation,Comments
2
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/2/_alt/1,
3
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/*_id/location/sourceaccessioncode/_merge/2/_alt/2,
4
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/authorlocationcode,
5
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*_id/aggregateoccurrence/*_id/taxonoccurrence/*_id/locationevent/sourceaccessioncode,
6
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
7
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
8
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*_id/aggregateoccurrence/*_id/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
9
/*s/individualOrganismObservation/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,"/*_id/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
10
/*s/individualOrganismObservation/@id,/*_id:[@merge=1]/aggregateoccurrence:[@merge=1]/*_id:[@merge=1]/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _ifs"
11
/*s/individualOrganismObservation/@id,/sourceaccessioncode,"""{"" sorts it with other _ifs"
12
/*s/individualOrganismObservation/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,** No input mapping for /*s/individualOrganismObservation/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID ** 
inputs/CTFS/maps/VegX.organisms.csv.disabled
1
CTFS:,VegX:,Comments
2
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*s/plot/plotName,
3
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*s/plot/plotUniqueIdentifier,
4
/*s/individualOrganismObservation/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,
5
/*s/individualOrganismObservation/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=censusNo]/value,
6
/*s/individualOrganismObservation/@id,/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=sourceAccessionCode]/value,
7
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",
8
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",
9
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",
inputs/CTFS/maps/VegX.organisms.full.csv.disabled
1
CTFS:,VegX:,Comments
2
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Family])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",
3
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Genus])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",
4
"/*s/individualOrganismObservation/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank=Species])/tcs:Name","/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",
5
/*s/individualOrganismObservation/*ID->/*s/plotObservation/simpleUserdefined[name=CensusNumber]/value,/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=censusNo]/value,
6
/*s/individualOrganismObservation/@id,/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=sourceAccessionCode]/value,
7
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotName,/*s/plot/plotName,
8
/*s/individualOrganismObservation/*ID->/*s/plotObservation/plotUniqueIdentifierID->/*s/plot[plotUniqueIdentifier]/plotUniqueIdentifier,/*s/plot/plotUniqueIdentifier,
9
/*s/individualOrganismObservation/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/*/relatedPlot[plotRelationship=Quadrat]/relatedPlotID,,

Also available in: Unified diff