Revision 3834
Added by Aaron Marcuse-Kubitza over 12 years ago
| VegBIEN.specimens.csv | ||
|---|---|---|
| 1 | 1 |
NCU-NCSC[DwC],VegBIEN:,Comments,Source,Order |
| 2 |
Accuracy,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,DwC,88
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Lat (-=S),"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value",,DwC,81
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Long (-=W),"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value",,DwC,82
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County,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,DwC,66
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State,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,DwC,65
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Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,DwC,63
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Collect Date,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3,,DwC,44
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Collect Date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3,,DwC,44
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Barcode,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",DwC,20
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SeriesName,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,DwC,12
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Cultivated?,"/location/locationevent/specimenreplicate/growthform/_map:[./{tree,shrub,liana,vine,herb,hemiepiphyte,epiphyte,grass,forb,moss,lichen,fungus,""floating aquatic"",""submerged aquatic""}=*,*=]/value/_map:[Yes=cultivated,No=wild]/value",,DwC,30
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Cultivated?,"/location/locationevent/specimenreplicate/iscultivated/_map:[cultivated=t,wild=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,DwC,30
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Cultivated?,"/location/locationevent/specimenreplicate/isnative/_map:[native=t,exotic=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,DwC,30
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Accession Number,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",DwC,19
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Full Taxon Name,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",DwC,134
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Accession Number,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",DwC,19
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SeriesName,/location/sourceaccessioncode/_alt/2/_merge/2,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,DwC,12
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Barcode,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",DwC,20
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| 2 |
Accuracy,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,http://rs.tdwg.org/dwc/terms/,88
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Lat (-=S),"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value",,http://rs.tdwg.org/dwc/terms/,81
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Long (-=W),"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value",,http://rs.tdwg.org/dwc/terms/,82
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County,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,http://rs.tdwg.org/dwc/terms/,66
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State,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,http://rs.tdwg.org/dwc/terms/,65
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Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,http://rs.tdwg.org/dwc/terms/,63
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Collect Date,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3,,http://rs.tdwg.org/dwc/terms/,44
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Collect Date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3,,http://rs.tdwg.org/dwc/terms/,44
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Barcode,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
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SeriesName,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
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Cultivated?,"/location/locationevent/specimenreplicate/growthform/_map:[./{tree,shrub,liana,vine,herb,hemiepiphyte,epiphyte,grass,forb,moss,lichen,fungus,""floating aquatic"",""submerged aquatic""}=*,*=]/value/_map:[Yes=cultivated,No=wild]/value",,http://rs.tdwg.org/dwc/terms/,30
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Cultivated?,"/location/locationevent/specimenreplicate/iscultivated/_map:[cultivated=t,wild=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,http://rs.tdwg.org/dwc/terms/,30
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Cultivated?,"/location/locationevent/specimenreplicate/isnative/_map:[native=t,exotic=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,http://rs.tdwg.org/dwc/terms/,30
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Accession Number,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
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Full Taxon Name,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname","Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134
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Accession Number,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
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SeriesName,/location/sourceaccessioncode/_alt/2/_merge/2,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/,12
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Barcode,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
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| 20 | 20 |
Alt E/W,,** No input mapping for Alt E/W ** |
| 21 | 21 |
Alt N/S,,** No input mapping for Alt N/S ** |
| 22 | 22 |
Elevation,,** No non-empty join mapping for VerbatimElevation ** |
Also available in: Unified diff
mappings/DwC2-VegBIEN.specimens.csv, DwC1-DwC2.specimens.csv: Sources: Replaced DwC with http://rs.tdwg.org/dwc/terms/, because DwC terms can come from many places but the DwC source referred specifically to this web page