Revision 3834
Added by Aaron Marcuse-Kubitza over 12 years ago
VegBIEN.specimens.csv | ||
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1 | 1 |
U[DwC],VegBIEN:,Comments,Source,Order |
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Lat,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,DwC,85
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Long,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,DwC,86
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Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,DwC,63
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Colldd,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,DwC,44
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Collmm,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,DwC,44
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Collyy,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,DwC,44
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Colldd,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,DwC,44
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Collmm,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,DwC,44
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Collyy,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,DwC,44
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Barcode,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",DwC,20
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Number,/location/locationevent/specimenreplicate/collectionnumber/_alt/1/_alt/2,,DwC,22
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Notes,/location/locationevent/specimenreplicate/description/_merge/1,,DwC,54
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ID,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",DwC,19
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Detyy,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,DwC,120
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,Brad: Bob: does this look correct for VegBank?,DwC,119
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,Brad: Bob: does this look correct for VegBank?,DwC,119
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,Brad: Bob: does this look correct for VegBank?,DwC,119
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Genus,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,DwC,147
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Family,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,DwC,146
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Collector,/location/locationevent/specimenreplicate/verbatimcollectorname/_merge/1,,DwC,23
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Addcoll,/location/locationevent/specimenreplicate/verbatimcollectorname/_merge/2,,DwC,23
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Gazetteer,"/location/locationnarrative/_merge/2/_merge/1/_label[label=""gazetteer""]/value/_merge/1","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",DwC,69
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Newgazett,"/location/locationnarrative/_merge/2/_merge/1/_label[label=""gazetteer""]/value/_merge/2","Only used in 1 row; Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",DwC,69
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Locnotes,/location/locationnarrative/_merge/2/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",DwC,69
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Ecology,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",DwC,52
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ID,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",DwC,19
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Barcode,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",DwC,20
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Lat,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,85
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Long,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,86
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Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",Brad: Required; reject record if this field NULL,http://rs.tdwg.org/dwc/terms/,63
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Colldd,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Collmm,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Collyy,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Colldd,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Collmm,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Collyy,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,44
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Barcode,/location/locationevent/specimenreplicate/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
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Number,/location/locationevent/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/,22
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Notes,/location/locationevent/specimenreplicate/description/_merge/1,,http://rs.tdwg.org/dwc/terms/,54
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ID,/location/locationevent/specimenreplicate/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
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Detyy,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/,120
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
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Detby,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,Brad: Bob: does this look correct for VegBank?,http://rs.tdwg.org/dwc/terms/,119
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Genus,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/,147
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Family,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,http://rs.tdwg.org/dwc/terms/,146
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Collector,/location/locationevent/specimenreplicate/verbatimcollectorname/_merge/1,,http://rs.tdwg.org/dwc/terms/,23
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Addcoll,/location/locationevent/specimenreplicate/verbatimcollectorname/_merge/2,,http://rs.tdwg.org/dwc/terms/,23
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Gazetteer,"/location/locationnarrative/_merge/2/_merge/1/_label[label=""gazetteer""]/value/_merge/1","Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",http://rs.tdwg.org/dwc/terms/,69
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Newgazett,"/location/locationnarrative/_merge/2/_merge/1/_label[label=""gazetteer""]/value/_merge/2","Only used in 1 row; Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",http://rs.tdwg.org/dwc/terms/,69
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Locnotes,/location/locationnarrative/_merge/2/_merge/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",http://rs.tdwg.org/dwc/terms/,69
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Ecology,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",http://rs.tdwg.org/dwc/terms/,52
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ID,/location/sourceaccessioncode/_alt/1,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",http://rs.tdwg.org/dwc/terms/,19
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Barcode,/location/sourceaccessioncode/_alt/2/_merge/3,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",http://rs.tdwg.org/dwc/terms/,20
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29 | 29 |
Alt,,What is this? |
30 | 30 |
Alt2,,What is this? |
31 | 31 |
Coorsyst,,** No input mapping for Coorsyst ** |
Also available in: Unified diff
mappings/DwC2-VegBIEN.specimens.csv, DwC1-DwC2.specimens.csv: Sources: Replaced DwC with http://rs.tdwg.org/dwc/terms/, because DwC terms can come from many places but the DwC source referred specifically to this web page