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Revision 3842

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/VegX-VegCSV.stems.csv: Mapped VegX abioticObservation terms

View differences:

mappings/VegX-VegCSV.stems.csv
1 1 
VegX:,VegCSV[DwC],Comments,Source,Order
2 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/magnesium,//*s/abioticObservation/magnesium,,,
3 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/nitrogen,//*s/abioticObservation/nitrogen,,,
4 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/ph,//*s/abioticObservation/ph,,,
5 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,//*s/abioticObservation/phosphorus,,,
6 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/potassium,//*s/abioticObservation/potassium,,,
7 2 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value,//*s/aggregateOrganismObservation/*/aggregateValue/value,,,
8 3 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/aggregateOrganismObservation[*ID]/*/aggregateValue/value,//*s/aggregateOrganismObservation/*/aggregateValue/value,,,
9 4 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/communityDetermination[*ID]/*s/communityConcept/commonName,//*s/communityDetermination/*s/communityConcept/commonName,,,
......
85 80 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",genus,,http://rs.tdwg.org/dwc/terms/,147
86 81 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ssp])/tcs:Name",infraspecificEpithet,,http://rs.tdwg.org/dwc/terms/,150
87 82 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=reg])/tcs:Name",kingdom,,http://rs.tdwg.org/dwc/terms/,142
83 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/magnesium,magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,4
88 84 
/*s/plot/geospatial/maximumDepthInMeters,maximumDepthInMeters,,http://rs.tdwg.org/dwc/terms/,75
89 85 
/*s/plot/geospatial/maximumElevationInMeters,maximumElevationInMeters,,http://rs.tdwg.org/dwc/terms/,72
90 86 
/*s/plot/geospatial/minimumDepthInMeters,minimumDepthInMeters,,http://rs.tdwg.org/dwc/terms/,74
91 87 
/*s/plot/geospatial/minimumElevationInMeters,minimumElevationInMeters,,http://rs.tdwg.org/dwc/terms/,71
88 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/nitrogen,nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,5
92 89 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ord])/tcs:Name",order,,http://rs.tdwg.org/dwc/terms/,145
90 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/ph,ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,6
91 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,2
93 92 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name",phylum,,http://rs.tdwg.org/dwc/terms/,143
93 
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/potassium,potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,3
94 94 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit",scientificName,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134
95 95 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name",scientificName,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134
96 96 
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name",scientificNameAuthorship,"Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",http://rs.tdwg.org/dwc/terms/,153
mappings/VegCSV-VegBIEN.specimens.csv
39 39 
//abioticObservation/simpleUserdefined[name=cationExchangeCapacity]/value,/location/locationevent/soilobs/cationexchangecapacity,,,
40 40 
//abioticObservation/simpleUserdefined[name=clay]/value,/location/locationevent/soilobs/clay,,,
41 41 
//abioticObservation/simpleUserdefined[name=conductivity]/value,/location/locationevent/soilobs/conductivity,,,
42 
//*s/abioticObservation/magnesium,/location/locationevent/soilobs/magnesium,,,
43 
//*s/abioticObservation/nitrogen,/location/locationevent/soilobs/nitrogen,,,
42 
magnesium,/location/locationevent/soilobs/magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,4
43 
nitrogen,/location/locationevent/soilobs/nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,5
44 44 
//abioticObservation/simpleUserdefined[name=organic]/value,/location/locationevent/soilobs/organic,,,
45 
//*s/abioticObservation/ph,/location/locationevent/soilobs/ph,,,
46 
//*s/abioticObservation/phosphorus,/location/locationevent/soilobs/phosphorus,,,
47 
//*s/abioticObservation/potassium,/location/locationevent/soilobs/potassium,,,
45 
ph,/location/locationevent/soilobs/ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,6
46 
phosphorus,/location/locationevent/soilobs/phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,2
47 
potassium,/location/locationevent/soilobs/potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,3
48 48 
//abioticObservation/simpleUserdefined[name=sand]/value,/location/locationevent/soilobs/sand,,,
49 49 
//abioticObservation/simpleUserdefined[name=silt]/value,/location/locationevent/soilobs/silt,,,
50 50 
//abioticObservation/simpleUserdefined[name=sodium]/value,/location/locationevent/soilobs/sodium,,,
mappings/VegCSV.self.specimens.csv
1 1 
VegCSV[DwC],VegCSV[DwC]
2 
//*s/abioticObservation/magnesium,//*s/abioticObservation/magnesium
3 
//*s/abioticObservation/nitrogen,//*s/abioticObservation/nitrogen
4 
//*s/abioticObservation/ph,//*s/abioticObservation/ph
5 
//*s/abioticObservation/phosphorus,//*s/abioticObservation/phosphorus
6 
//*s/abioticObservation/potassium,//*s/abioticObservation/potassium
7 2 
//*s/aggregateOrganismObservation/*/aggregateValue/value,//*s/aggregateOrganismObservation/*/aggregateValue/value
8 3 
//*s/communityDetermination/*s/communityConcept/commonName,//*s/communityDetermination/*s/communityConcept/commonName
9 4 
//*s/communityDetermination/*s/communityConcept/name,//*s/communityDetermination/*s/communityConcept/name
......
161 156 
locationID,locationID
162 157 
locationRemarks,locationRemarks
163 158 
lowestBiostratigraphicZone,lowestBiostratigraphicZone
159 
magnesium,magnesium
164 160 
maximumDepthInMeters,maximumDepthInMeters
165 161 
maximumDistanceAboveSurfaceInMeters,maximumDistanceAboveSurfaceInMeters
166 162 
maximumElevationInMeters,maximumElevationInMeters
......
184 180 
namePublishedIn,namePublishedIn
185 181 
namePublishedInID,namePublishedInID
186 182 
namePublishedInYear,namePublishedInYear
183 
nitrogen,nitrogen
187 184 
nomenclaturalCode,nomenclaturalCode
188 185 
nomenclaturalStatus,nomenclaturalStatus
189 186 
occurrenceID,occurrenceID
......
196 193 
ownerInstitutionCode,ownerInstitutionCode
197 194 
parentNameUsage,parentNameUsage
198 195 
parentNameUsageID,parentNameUsageID
196 
ph,ph
197 
phosphorus,phosphorus
199 198 
phylum,phylum
200 199 
pointRadiusSpatialFit,pointRadiusSpatialFit
200 
potassium,potassium
201 201 
preparations,preparations
202 202 
previousIdentifications,previousIdentifications
203 203 
recordNumber,recordNumber

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