Revision 3843
Added by Aaron Marcuse-Kubitza over 12 years ago
| mappings/VegX-VegCSV.stems.csv | ||
|---|---|---|
| 63 | 63 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",computer.family,,http://rs.tdwg.org/dwc/terms/,146 |
| 64 | 64 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",computer.genus,,http://rs.tdwg.org/dwc/terms/,147 |
| 65 | 65 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Name",computer.infraspecificEpithet,,http://rs.tdwg.org/dwc/terms/,150 |
| 66 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Rank",computer.infraspecificEpithet,,http://rs.tdwg.org/dwc/terms/,150 |
|
| 67 | 66 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name",computer.scientificNameAuthorship,"Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",http://rs.tdwg.org/dwc/terms/,153 |
| 68 | 67 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",computer.specificEpithet,,http://rs.tdwg.org/dwc/terms/,149 |
| 68 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=TaxonomicRankBelowSubspeciesEnum])/tcs:Rank",computer.taxonRank,,http://rs.tdwg.org/dwc/terms/,151 |
|
| 69 | 69 |
/*s/plot/location[placeType=continent]/placeName,continent,Brad: OMIT,http://rs.tdwg.org/dwc/terms/,59 |
| 70 | 70 |
/*s/plot/geospatial/CoordinateUncertaintyInMeters,coordinateUncertaintyInMeters,,http://rs.tdwg.org/dwc/terms/,88 |
| 71 | 71 |
/*s/plot/location[placeType=country]/placeName,country,Brad: Required; reject record if this field NULL,http://rs.tdwg.org/dwc/terms/,63 |
| ... | ... | |
| 78 | 78 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/note/text,fieldNotes,,http://rs.tdwg.org/dwc/terms/,54 |
| 79 | 79 |
/*s/plot/geospatial/FootprintWKT,footprintWKT,,http://rs.tdwg.org/dwc/terms/,91 |
| 80 | 80 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",genus,,http://rs.tdwg.org/dwc/terms/,147 |
| 81 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit",identificationQualifier,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,124 |
|
| 81 | 82 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ssp])/tcs:Name",infraspecificEpithet,,http://rs.tdwg.org/dwc/terms/,150 |
| 82 | 83 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=reg])/tcs:Name",kingdom,,http://rs.tdwg.org/dwc/terms/,142 |
| 83 | 84 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/magnesium,magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,4 |
| ... | ... | |
| 91 | 92 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,2 |
| 92 | 93 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name",phylum,,http://rs.tdwg.org/dwc/terms/,143 |
| 93 | 94 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/potassium,potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg-plotobservation.xsd#/AbioticObservationType,3 |
| 94 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/fit",scientificName,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134 |
|
| 95 | 95 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name",scientificName,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134 |
| 96 | 96 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name",scientificNameAuthorship,"Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",http://rs.tdwg.org/dwc/terms/,153 |
| 97 | 97 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",specificEpithet,,http://rs.tdwg.org/dwc/terms/,149 |
| mappings/VegCSV-VegBIEN.specimens.csv | ||
|---|---|---|
| 99 | 99 |
//individualOrganismObservation/simpleUserdefined[name=sourceAccessionCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
| 100 | 100 |
//individualOrganismObservation/simpleUserdefined[name=authorPlantCode]/value,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",,
|
| 101 | 101 |
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134 |
| 102 |
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,http://rs.tdwg.org/dwc/terms/,150
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| 102 |
computer.taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,http://rs.tdwg.org/dwc/terms/,151
|
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| 103 | 103 |
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",http://rs.tdwg.org/dwc/terms/,153 |
| 104 | 104 |
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,http://rs.tdwg.org/dwc/terms/,150 |
| 105 | 105 |
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://rs.tdwg.org/dwc/terms/,149 |
| 106 | 106 |
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/,147 |
| 107 | 107 |
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,http://rs.tdwg.org/dwc/terms/,146 |
| 108 |
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134
|
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| 108 |
identificationQualifier,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,124
|
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| 109 | 109 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,http://rs.tdwg.org/dwc/terms/,150 |
| 110 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134
|
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| 110 |
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,124
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| 111 | 111 |
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first","Brad: Bob, Nick, please is this mapping OK?",http://rs.tdwg.org/dwc/terms/,134 |
| 112 | 112 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",http://rs.tdwg.org/dwc/terms/,153 |
| 113 | 113 |
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://rs.tdwg.org/dwc/terms/,149 |
| ... | ... | |
| 187 | 187 |
higherGeographyID,,,http://rs.tdwg.org/dwc/terms/,57 |
| 188 | 188 |
highestBiostratigraphicZone,,,http://rs.tdwg.org/dwc/terms/,112 |
| 189 | 189 |
identificationID,,,http://rs.tdwg.org/dwc/terms/,118 |
| 190 |
identificationQualifier,,,http://rs.tdwg.org/dwc/terms/,124 |
|
| 191 | 190 |
identificationReferences,,,http://rs.tdwg.org/dwc/terms/,121 |
| 192 | 191 |
identificationRemarks,,,http://rs.tdwg.org/dwc/terms/,123 |
| 193 | 192 |
identificationVerificationStatus,,,http://rs.tdwg.org/dwc/terms/,122 |
| mappings/VegCSV.self.specimens.csv | ||
|---|---|---|
| 71 | 71 |
computer.infraspecificEpithet,computer.infraspecificEpithet |
| 72 | 72 |
computer.scientificNameAuthorship,computer.scientificNameAuthorship |
| 73 | 73 |
computer.specificEpithet,computer.specificEpithet |
| 74 |
computer.taxonRank,computer.taxonRank |
|
| 74 | 75 |
continent,continent |
| 75 | 76 |
coordinatePrecision,coordinatePrecision |
| 76 | 77 |
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters |
Also available in: Unified diff
mappings/VegX-VegCSV.stems.csv: Resolved ambiguous terms that appeared twice on the output side