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Revision 3868

mappings/VegX-VegCSV.stems.csv: Source VegBank terms directly from the appropriate VegBank data dictionary page, to provide an automatic link to the description of the term. Having these direct links will also assist in creating a data dictionary for VegCSV and eventually VegBIEN (using mappings/VegCSV-VegBIEN.specimens.csv).

View differences:

mappings/VegX-VegCSV.stems.csv
18 18
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=method]/*ID/method/name,//plotObservation/simpleUserdefined[name=method]/*ID/method/name,,,
19 19
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=precipitation]/value,//plotObservation/simpleUserdefined[name=precipitation]/value,,,
20 20
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
21
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=authorPlantCode]/value,authorPlantCode,,"http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#observation.authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
21
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=authorPlantCode]/value,authorPlantCode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
22 22
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/diameterBaseDistance[baseDistance/value=0]/diameter,basalDiameter,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#basal_diam,5
23
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,baseSaturation,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.baseSaturation,14
23
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value,baseSaturation,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
24 24
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value,calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
25 25
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/simpleUserdefined[name=canopyForm]/value,canopyForm,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#canopy_form,57
26 26
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/simpleUserdefined[name=canopyPosition]/value,canopyPosition,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#canopy_position,56
27 27
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value,carbon,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
28 28
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher,catalogNumber,,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
29
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,cationExchangeCapacity,Expanded for clarity,"http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap",13
29
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value,cationExchangeCapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap",13
30 30
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=censusNo]/value,censusNumber,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#census_no,4
31 31
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=cl])/tcs:Name",class,,http://rs.tdwg.org/dwc/terms/#class,144
32
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,clay,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilClay,10
32
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value,clay,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
33 33
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=collectionDate]/value,collectedDate,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien2_staging&table=nybg_raw&target=tbl_structure.php#CollectedDate,29
34 34
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name",computer.family,,"http://rs.tdwg.org/dwc/terms/#family, https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer",146
35 35
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",computer.genus,,"http://rs.tdwg.org/dwc/terms/#genus, https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer",147
......
52 52
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/note/text,fieldNotes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
53 53
/*s/plot/geospatial/FootprintWKT,footprintWKT,,http://rs.tdwg.org/dwc/terms/#footprintWKT,91
54 54
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name",genus,,http://rs.tdwg.org/dwc/terms/#genus,147
55
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=growthForm]/value,growthForm,a.k.a. habit (SALVIAS: http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data),http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#observation.growthform1Type,62
55
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=growthForm]/value,growthForm,a.k.a. habit (SALVIAS: http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data),http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
56 56
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/simpleUserdefined[name=height]/value,height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
57 57
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/height,height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
58 58
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=height]/value,height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
......
73 73
/*s/plot/geospatial/minimumElevationInMeters,minimumElevationInMeters,,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
74 74
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/nitrogen,nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
75 75
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=ord])/tcs:Name",order,,http://rs.tdwg.org/dwc/terms/#order,145
76
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value,organic,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilOrganic,6
76
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value,organic,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
77 77
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/ph,ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
78 78
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
79 79
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name",phylum,,http://rs.tdwg.org/dwc/terms/#phylum,143
......
86 86
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeX,relativePlotX,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
87 87
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeY,relativePlotY,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
88 88
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeY,relativePlotY,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
89
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,sand,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilSand,8
89
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
90 90
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name",scientificName,,http://rs.tdwg.org/dwc/terms/#scientificName,134
91 91
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=auth])/tcs:Name",scientificNameAuthorship,,http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,153
92
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value,silt,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilSilt,9
92
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value,silt,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
93 93
/*s/plot/slopeAspect,slopeAspect,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
94 94
/*s/plot/slopeGradient,slopeGradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
95 95
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value,sodium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
96 96
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name",specificEpithet,,http://rs.tdwg.org/dwc/terms/#specificEpithet,149
97 97
/*s/plot/location[placeType=state]/placeName,stateProvince,,http://rs.tdwg.org/dwc/terms/#stateProvince,65
98
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,texture,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilTexture,7
98
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
99 99
/*s/plot/geospatial/verbatimElevation,verbatimElevation,,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
mappings/VegCSV-VegBIEN.specimens.csv
33 33
//plot/plotUniqueIdentifier,/location/locationevent/parent_id/locationevent/sourceaccessioncode,,,
34 34
//plotObservation/simpleUserdefined[name=precipitation]/value,/location/locationevent/precipitation,,,
35 35
acidity,/location/locationevent/soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
36
baseSaturation,/location/locationevent/soilobs/basesaturation,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.baseSaturation,14
36
baseSaturation,/location/locationevent/soilobs/basesaturation,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
37 37
calcium,/location/locationevent/soilobs/calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
38 38
carbon,/location/locationevent/soilobs/carbon,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
39
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap",13
40
clay,/location/locationevent/soilobs/clay,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilClay,10
39
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap",13
40
clay,/location/locationevent/soilobs/clay,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
41 41
conductivity,/location/locationevent/soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
42 42
magnesium,/location/locationevent/soilobs/magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
43 43
nitrogen,/location/locationevent/soilobs/nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
44
organic,/location/locationevent/soilobs/organic,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilOrganic,6
44
organic,/location/locationevent/soilobs/organic,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
45 45
ph,/location/locationevent/soilobs/ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
46 46
phosphorus,/location/locationevent/soilobs/phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
47 47
potassium,/location/locationevent/soilobs/potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/potassium,3
48
sand,/location/locationevent/soilobs/sand,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilSand,8
49
silt,/location/locationevent/soilobs/silt,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilSilt,9
48
sand,/location/locationevent/soilobs/sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
49
silt,/location/locationevent/soilobs/silt,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
50 50
sodium,/location/locationevent/soilobs/sodium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
51
texture,/location/locationevent/soilobs/texture,,http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#soilObs.soilTexture,7
51
texture,/location/locationevent/soilobs/texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
52 52
//plot/plotUniqueIdentifier,/location/locationevent/sourceaccessioncode,,,
53 53
collectionCode,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
54 54
recordNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/1,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
......
75 75
//ordinal/coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,,
76 76
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#census_no,4
77 77
//*s/individualOrganismObservation/volumeCanopy/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,,,
78
authorPlantCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#observation.authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
78
authorPlantCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
79 79
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
80 80
individualOrganismObservation.uniqueID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Field name shortened for standardization; ""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier",
81 81
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,http://rs.tdwg.org/dwc/terms/#individualCount,25
......
92 92
//individualOrganism/identificationLabel[@id=2],/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,,,
93 93
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
94 94
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
95
growthForm,/location/locationevent/taxonoccurrence/growthform,a.k.a. habit (SALVIAS: http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data),http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#observation.growthform1Type,62
95
growthForm,/location/locationevent/taxonoccurrence/growthform,a.k.a. habit (SALVIAS: http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data),http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
96 96
individualOrganismObservation.uniqueID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"Field name shortened for standardization; ""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier",
97
authorPlantCode,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://vegbank.org/vegdocs/design/erd/vegbank_erd.pdf#observation.authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
97
authorPlantCode,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
98 98
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,,http://rs.tdwg.org/dwc/terms/#scientificName,134
99 99
computer.taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,"http://rs.tdwg.org/dwc/terms/#taxonRank, https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer",151
100 100
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",,"http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship, https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer",153

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