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Revision 3877

mappings/VegX-VegCSV.stems.csv: Mapped plotObservation user-defined terms

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mappings/VegX-VegCSV.stems.csv
6 6
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName",//individualName/givenName,,,
7 7
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",//individualName/surName,,,
8 8
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent,//ordinal/coverPercent,,,
9
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=method]/*ID/method/name,//plotObservation/simpleUserdefined[name=method]/*ID/method/name,,,
10
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=precipitation]/value,//plotObservation/simpleUserdefined[name=precipitation]/value,,,
11 9
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value,acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
12 10
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/simpleUserdefined[name=authorPlantCode]/value,authorPlantCode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
13 11
/*s/plot/plotName,authorPlotCode,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename,1
......
71 69
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/ph,ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
72 70
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
73 71
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name",phylum,,http://rs.tdwg.org/dwc/terms/#phylum,143
72
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=method]/*ID/method/name,plot.method,Table name included to distinguish scopes a method can have,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.plot_methodology,
74 73
/*s/plot/note,plot.note,Table name included to distinguish from other notes,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note,4
75 74
/*s/plot/plotUniqueIdentifier,plot.uniqueID,Field name shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier,0
76 75
/*s/plot/area,plotArea,Table name prefixed for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
77 76
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/potassium,potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
77
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=precipitation]/value,precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
78 78
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/*ID->/*s/project/title[@id=name],project.title,Table name included to distinguish from other titles,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project/title,0
79 79
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/*ID->/*s/project/title[@id=sourceAccessionCode],project.uniqueID,Field name shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier",
80 80
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeX,relativePlotX,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
mappings/VegCSV-VegBIEN.specimens.csv
17 17
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,http://rs.tdwg.org/dwc/terms/#stateProvince,65
18 18
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
19 19
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
20
//plotObservation/simpleUserdefined[name=method]/*ID/method/name,/location/locationevent/*_id/method/name,,,
20
plot.method,/location/locationevent/*_id/method/name,Table name included to distinguish scopes a method can have,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.plot_methodology,
21 21
project.title,/location/locationevent/*_id/project/projectname,Table name included to distinguish from other titles,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project/title,0
22 22
project.uniqueID,/location/locationevent/*_id/project/sourceaccessioncode,Field name shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier",
23 23
authorPlotCode,/location/locationevent/authorlocationcode,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename,1
......
31 31
parentPlot.authorPlotCode,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename,1
32 32
parentPlot.authorPlotCode,/location/locationevent/parent_id/locationevent/authorlocationcode,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename,1
33 33
parentPlot.uniqueID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,Field name shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier,0
34
//plotObservation/simpleUserdefined[name=precipitation]/value,/location/locationevent/precipitation,,,
34
precipitation,/location/locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
35 35
acidity,/location/locationevent/soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
36 36
baseSaturation,/location/locationevent/soilobs/basesaturation,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
37 37
calcium,/location/locationevent/soilobs/calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
mappings/VegCSV.self.specimens.csv
6 6
//individualName/givenName,//individualName/givenName
7 7
//individualName/surName,//individualName/surName
8 8
//ordinal/coverPercent,//ordinal/coverPercent
9
//plotObservation/simpleUserdefined[name=method]/*ID/method/name,//plotObservation/simpleUserdefined[name=method]/*ID/method/name
10
//plotObservation/simpleUserdefined[name=precipitation]/value,//plotObservation/simpleUserdefined[name=precipitation]/value
11 9
acceptedNameUsage,acceptedNameUsage
12 10
acceptedNameUsageID,acceptedNameUsageID
13 11
acidity,acidity
......
179 177
ph,ph
180 178
phosphorus,phosphorus
181 179
phylum,phylum
180
plot.method,plot.method
182 181
plot.note,plot.note
183 182
plot.uniqueID,plot.uniqueID
184 183
plotArea,plotArea
185 184
pointRadiusSpatialFit,pointRadiusSpatialFit
186 185
potassium,potassium
186
precipitation,precipitation
187 187
preparations,preparations
188 188
previousIdentifications,previousIdentifications
189 189
project.title,project.title

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