Revision 3896
Added by Aaron Marcuse-Kubitza over 12 years ago
mappings/VegX-VegCSV.stems.csv | ||
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62 | 62 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/ph,ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6 |
63 | 63 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/phosphorus,phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2 |
64 | 64 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=phyl_div])/tcs:Name",phylum,,http://rs.tdwg.org/dwc/terms/#phylum,143 |
65 |
/*s/plot/area,plotArea,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
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66 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/obsEndDate,plotEventEndDate,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
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67 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/obsStartDate,plotEventStartDate,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
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65 |
/*s/plot/area,plotArea,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11 |
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66 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/obsEndDate,plotEventEndDate,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
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67 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/obsStartDate,plotEventStartDate,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
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68 | 68 |
/*s/plot/plotUniqueIdentifier,plotID,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
69 | 69 |
/*s/plot/plotName,plotName,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1 |
70 |
/*s/plot/note,plotNotes,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54"
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70 |
/*s/plot/note,plotNotes,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54" |
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71 | 71 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/potassium,potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3 |
72 | 72 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=precipitation]/value,precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13 |
73 | 73 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/*ID->/*s/individualOrganism/identificationLabel[@id=2],previousTag,Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8 |
... | ... | |
76 | 76 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/*ID->/*s/project/title[@id=name],projectName,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
77 | 77 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName",recordedBy.givenName,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/givenName","23, 01" |
78 | 78 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",recordedBy.surName,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/surName","23, 02" |
79 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeX,relativePlotX,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
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80 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeX,relativePlotX,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
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81 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeY,relativePlotY,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
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82 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeY,relativePlotY,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
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79 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeX,relativePlotX,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801 |
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80 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeX,relativePlotX,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801 |
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81 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]->/*s/individualOrganismObservation[relatedIndividual/relatedItem[itemRelationship=stemParent]/relatedItemID]/relativePlotPosition/relativeY,relativePlotY,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802 |
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82 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/relativePlotPosition/relativeY,relativePlotY,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802 |
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83 | 83 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]/simpleUserdefined[name=method]/*ID/method/name,samplingProtocol,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42 |
84 | 84 |
/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value,sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8 |
85 | 85 |
"/*s/plot->/*s/plotObservation[*UniqueIdentifierID]->/*s/individualOrganismObservation[*ID]/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,!partyWithRole]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=binom])/tcs:Name",scientificName,,http://rs.tdwg.org/dwc/terms/#scientificName,134 |
mappings/VegCSV-VegBIEN.specimens.csv | ||
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1 | 1 |
VegCSV[DwC],VegBIEN:,Comments,Source,Order within table |
2 |
plotArea,/location/area,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
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2 |
plotArea,/location/area,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11 |
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3 | 3 |
verbatimElevation,/location/elevation/_alt/1,,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70 |
4 | 4 |
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72 |
5 | 5 |
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71 |
... | ... | |
23 | 23 |
plotName,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1 |
24 | 24 |
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
25 | 25 |
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
26 |
plotEventEndDate,/location/locationevent/obsenddate,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
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27 |
plotEventStartDate,/location/locationevent/obsstartdate,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
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26 |
plotEventEndDate,/location/locationevent/obsenddate,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
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27 |
plotEventStartDate,/location/locationevent/obsstartdate,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
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28 | 28 |
parentPlotID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
29 | 29 |
parentPlotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
30 | 30 |
parentPlotName,/location/locationevent/parent_id/locationevent/authorlocationcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
... | ... | |
86 | 86 |
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33 |
87 | 87 |
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Number removed for clarity; Quotes sort it before tag2,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9 |
88 | 88 |
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8 |
89 |
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
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90 |
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
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89 |
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801 |
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90 |
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802 |
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91 | 91 |
growthForm,/location/locationevent/taxonoccurrence/growthform,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62 |
92 | 92 |
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",http://rs.tdwg.org/dwc/terms/#occurrenceID,19 |
93 | 93 |
fieldNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"""{"" sorts it with other _if:[name=specimenreplicate_via]s",http://rs.tdwg.org/dwc/terms/#fieldNumber,53 |
... | ... | |
118 | 118 |
locality,/location/locationnarrative,,http://rs.tdwg.org/dwc/terms/#locality,68 |
119 | 119 |
verbatimLocality,/location/locationnarrative/_merge/2,,http://rs.tdwg.org/dwc/terms/#verbatimLocality,69 |
120 | 120 |
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",http://rs.tdwg.org/dwc/terms/#habitat,52 |
121 |
plotNotes,/location/notespublic,Table name added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54"
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121 |
plotNotes,/location/notespublic,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54" |
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122 | 122 |
slopeAspect,/location/slopeaspect/_compass/value,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15 |
123 | 123 |
slopeGradient,/location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16 |
124 | 124 |
institutionCode,/location/sourceaccessioncode/_alt/2/_merge/1,,http://rs.tdwg.org/dwc/terms/#institutionCode,11 |
Also available in: Unified diff
mappings/VegX-VegCSV.stems.csv: Comments: Changed "Table name" to "Table" to be concise