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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3701 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Added synchronization of back...
  bin 3902 over 12 years Aaron Marcuse-Kubitza union: Added full flag to turn off merging mapp...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 3909 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Moved collectiondate from ...
  lib 3816 over 12 years Aaron Marcuse-Kubitza util.py: list_subset(): Made an index of '+' ap...
  mappings 3909 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Moved collectiondate from ...
  schemas 3911 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: aggregateoccurrence: Added...
  to_do 2547 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect the mont...
Makefile 10.1 KB 3764 over 12 years Aaron Marcuse-Kubitza root Makefile, input.Makefile: Maps validation:...
README.TXT 9.03 KB 3845 over 12 years Aaron Marcuse-Kubitza README.TXT: After a new import: Added steps to ...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
3911 08/09/2012 12:21 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: aggregateoccurrence: Added notes, to serve the purpose that specimenreplicate.description previously did. specimenreplicate.description is not appropriate for plots data, and often not appropriate even for specimens data, which uses fieldNotes as a general notes field rather than a description of the specimen.

3910 08/09/2012 12:07 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: aggregateoccurrence: Reordered linecover so it's near cover instead of at the end

3909 08/09/2012 12:02 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Moved collectiondate from specimenreplicate to aggregateoccurrence because it's actually the SALVIAS census_date, which is the date the plant was sampled, rather than the DwC eventDate, which is the date the specimen was collected

3908 08/09/2012 11:56 AM Aaron Marcuse-Kubitza

mappings/DwC2-VegBIEN.specimens.csv: Mapped specimenreplicate via plantobservation for consistency with plots data. (This change is required for VegCSV table merging to work properly.) This is also a more accurate way of representing the data, because a specimen in fact comes from a plant, and it's natural to place the plant-related data (measurements, etc.) in the plantobservation table.

3907 08/09/2012 11:42 AM Aaron Marcuse-Kubitza

mappings/DwC2-VegBIEN.specimens.csv: Mapped specimenreplicate via plantobservation for consistency with plots data. (This change is required for VegCSV table merging to work properly.) This is also a more accurate way of representing the data, because a specimen in fact comes from a plant, and it's natural to place the plant-related data (measurements, etc.) in the plantobservation table.

3906 08/09/2012 10:41 AM Aaron Marcuse-Kubitza

mappings/VegX-VegCSV.stems.csv: Remapped stem notes to new stemNotes term, and mapped new organism notes VegX XPath to now-available DwC fieldNotes

3905 08/09/2012 10:30 AM Aaron Marcuse-Kubitza

inputs/SALVIAS/maps/VegX.organisms.csv: Map organism notes to different place than stem notes, because these are separate fields

3904 08/09/2012 10:09 AM Aaron Marcuse-Kubitza

mappings/Makefile: VegCSV-VegBIEN.specimens.csv: Temporarily sort by input column rather than output column, to assist in finding terms that map to different places in the DwC- and VegX-VegBIEN mappings

3903 08/09/2012 10:02 AM Aaron Marcuse-Kubitza

mappings/Makefile: VegCSV-VegBIEN.specimens.csv: Use new all option to union, in order to manually review inputs which appear in both maps but map to different places

3902 08/09/2012 10:01 AM Aaron Marcuse-Kubitza

union: Added full flag to turn off merging mappings that are in both maps, in order to review inputs which appear in both maps but map to different places

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