Revision 3953
Added by Aaron Marcuse-Kubitza over 12 years ago
inputs/Madidi/test/import.plots.xml.ref | ||
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73 | 73 |
<sourceaccessioncode>$Expedition number</sourceaccessioncode> |
74 | 74 |
</project> |
75 | 75 |
</project_id> |
76 |
<authorlocationcode>$Inventory name</authorlocationcode>
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|
76 |
<authoreventcode>$Inventory name</authoreventcode>
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77 | 77 |
<commclass> |
78 | 78 |
<commdetermination> |
79 | 79 |
<commconcept_id> |
inputs/Madidi/maps/VegBIEN.plots.csv | ||
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10 | 10 |
Longitude (DMS),"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86 |
11 | 11 |
Expedition name,/location/locationevent/*_id/project/projectname,Consistent (globally unique) between PPM and PT data,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
12 | 12 |
Expedition number,/location/locationevent/*_id/project/sourceaccessioncode,Consistent (globally unique) between PPM and PT data,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
13 |
Inventory name,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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13 |
Inventory name,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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14 | 14 |
Vegetation type,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
15 | 15 |
Locality description,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Often begins with the text in Vegetation type; Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
16 | 16 |
First evaluation,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
inputs/CVS/test/import.organisms.xml.ref | ||
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55 | 55 |
</namedplace_id> |
56 | 56 |
</locationdetermination> |
57 | 57 |
<locationevent> |
58 |
<authorlocationcode>$authorObsCode</authorlocationcode>
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58 |
<authoreventcode>$authorObsCode</authoreventcode>
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59 | 59 |
<obsstartdate><_date><date><_dateRangeStart><value><_date><date>$obsStartDate</date></_date></value></_dateRangeStart></date></_date></obsstartdate> |
60 | 60 |
<taxonoccurrence> |
61 | 61 |
<aggregateoccurrence><cover>$%cover</cover></aggregateoccurrence> |
inputs/CVS/maps/VegBIEN.organisms.csv | ||
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6 | 6 |
publicLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86 |
7 | 7 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,http://rs.tdwg.org/dwc/terms/#county,66 |
8 | 8 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,http://rs.tdwg.org/dwc/terms/#stateProvince,65 |
9 |
authorObsCode,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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9 |
authorObsCode,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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10 | 10 |
obsStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
11 | 11 |
%cover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0 |
12 | 12 |
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,,http://rs.tdwg.org/dwc/terms/#scientificName,134 |
inputs/SALVIAS-CSV/test/import.plots.xml.ref | ||
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104 | 104 |
<locationevent> |
105 | 105 |
<method_id><method><name>$plot_methodology</name></method></method_id> |
106 | 106 |
<project_id><project><projectname>$project</projectname></project></project_id> |
107 |
<authorlocationcode>$plot_code</authorlocationcode>
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107 |
<authoreventcode>$plot_code</authoreventcode>
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108 | 108 |
<commclass> |
109 | 109 |
<commdetermination> |
110 | 110 |
<commconcept_id> |
inputs/SALVIAS-CSV/test/import.organisms.xml.ref | ||
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2 | 2 |
<VegBIEN> |
3 | 3 |
<location id="-1"> |
4 | 4 |
<locationevent> |
5 |
<authorlocationcode>$subplot</authorlocationcode>
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5 |
<authoreventcode>$subplot</authoreventcode>
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6 | 6 |
<obsstartdate><_date><date><_dateRangeStart><value><_date><year>$census_date</year></_date></value></_dateRangeStart></date></_date></obsstartdate> |
7 | 7 |
<parent_id> |
8 | 8 |
<locationevent> |
... | ... | |
16 | 16 |
</sourceaccessioncode> |
17 | 17 |
</location> |
18 | 18 |
</location_id> |
19 |
<authorlocationcode>$plot_code</authorlocationcode>
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19 |
<authoreventcode>$plot_code</authoreventcode>
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20 | 20 |
<sourceaccessioncode>$PLOT_ID</sourceaccessioncode> |
21 | 21 |
</locationevent> |
22 | 22 |
</parent_id> |
inputs/SALVIAS-CSV/maps/VegBIEN.plots.csv | ||
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13 | 13 |
major_geo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59 |
14 | 14 |
plot_methodology,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42 |
15 | 15 |
project,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
16 |
plot_code,/location/locationevent/authorlocationcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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16 |
plot_code,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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17 | 17 |
holdridge_life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
18 | 18 |
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
19 | 19 |
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
inputs/SALVIAS-CSV/maps/VegBIEN.organisms.csv | ||
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1 | 1 |
SALVIAS-CSV,VegBIEN:,Comments,Source,Order within table |
2 |
subplot,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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2 |
subplot,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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3 | 3 |
census_date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_date/year,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
4 | 4 |
PLOT_ID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
5 | 5 |
plot_code,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
6 |
plot_code,/location/locationevent/parent_id/locationevent/authorlocationcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
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6 |
plot_code,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
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7 | 7 |
PLOT_ID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
8 | 8 |
no_of_individuals,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25 |
9 | 9 |
cover_percent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0 |
inputs/SALVIAS/test/import.plots.xml.ref | ||
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104 | 104 |
<locationevent> |
105 | 105 |
<method_id><method><name>$PlotMethod</name></method></method_id> |
106 | 106 |
<project_id><project><projectname>$project_id</projectname></project></project_id> |
107 |
<authorlocationcode>$SiteCode</authorlocationcode>
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|
107 |
<authoreventcode>$SiteCode</authoreventcode>
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|
108 | 108 |
<commclass> |
109 | 109 |
<commdetermination> |
110 | 110 |
<commconcept_id> |
inputs/SALVIAS/test/import.organisms.xml.ref | ||
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2 | 2 |
<VegBIEN> |
3 | 3 |
<location id="-1"> |
4 | 4 |
<locationevent> |
5 |
<authorlocationcode>$Line</authorlocationcode>
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|
5 |
<authoreventcode>$Line</authoreventcode>
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|
6 | 6 |
<parent_id> |
7 | 7 |
<locationevent> |
8 | 8 |
<location_id> |
... | ... | |
15 | 15 |
</sourceaccessioncode> |
16 | 16 |
</location> |
17 | 17 |
</location_id> |
18 |
<authorlocationcode>$PlotCode</authorlocationcode>
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18 |
<authoreventcode>$PlotCode</authoreventcode>
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19 | 19 |
<sourceaccessioncode>$PlotID</sourceaccessioncode> |
20 | 20 |
</locationevent> |
21 | 21 |
</parent_id> |
inputs/SALVIAS/maps/VegBIEN.plots.csv | ||
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13 | 13 |
MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59 |
14 | 14 |
PlotMethod,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42 |
15 | 15 |
project_id,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
16 |
SiteCode,/location/locationevent/authorlocationcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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16 |
SiteCode,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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17 | 17 |
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
18 | 18 |
life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
19 | 19 |
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
inputs/SALVIAS/maps/VegBIEN.organisms.csv | ||
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1 | 1 |
SALVIAS,VegBIEN:,Comments,Source,Order within table |
2 |
Line,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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2 |
Line,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
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3 | 3 |
PlotID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
4 | 4 |
PlotCode,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
5 |
PlotCode,/location/locationevent/parent_id/locationevent/authorlocationcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
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5 |
PlotCode,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
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6 | 6 |
PlotID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
7 | 7 |
census_date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_*/date,,http://rs.tdwg.org/dwc/terms/#eventDate,44 |
8 | 8 |
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25 |
schemas/vegbien.my.sql | ||
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771 | 771 |
parent_id int(11), |
772 | 772 |
location_id int(11) NOT NULL, |
773 | 773 |
project_id int(11), |
774 |
authorlocationcode text,
|
|
774 |
authoreventcode text,
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|
775 | 775 |
previous_id int(11), |
776 | 776 |
dateaccuracy text, |
777 | 777 |
method_id int(11), |
... | ... | |
3662 | 3662 |
|
3663 | 3663 |
|
3664 | 3664 |
-- |
3665 |
-- Name: locationevent_unique_within_parent_by_authorlocationcode; Type: INDEX; Schema: public; Owner: -; Tablespace:
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3665 |
-- Name: locationevent_unique_within_parent_by_authoreventcode; Type: INDEX; Schema: public; Owner: -; Tablespace:
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3666 | 3666 |
-- |
3667 | 3667 |
|
3668 | 3668 |
|
schemas/vegbien.sql | ||
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1064 | 1064 |
parent_id integer, |
1065 | 1065 |
location_id integer NOT NULL, |
1066 | 1066 |
project_id integer, |
1067 |
authorlocationcode text,
|
|
1067 |
authoreventcode text,
|
|
1068 | 1068 |
previous_id integer, |
1069 | 1069 |
dateaccuracy text, |
1070 | 1070 |
method_id integer, |
... | ... | |
4189 | 4189 |
-- Name: locationevent_unique_within_location; Type: INDEX; Schema: public; Owner: -; Tablespace: |
4190 | 4190 |
-- |
4191 | 4191 |
|
4192 |
CREATE UNIQUE INDEX locationevent_unique_within_location ON locationevent USING btree (location_id, (COALESCE(obsstartdate, 'infinity'::timestamp with time zone))) WHERE (((parent_id IS NULL) AND (sourceaccessioncode IS NULL)) AND (authorlocationcode IS NULL));
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4192 |
CREATE UNIQUE INDEX locationevent_unique_within_location ON locationevent USING btree (location_id, (COALESCE(obsstartdate, 'infinity'::timestamp with time zone))) WHERE (((parent_id IS NULL) AND (sourceaccessioncode IS NULL)) AND (authoreventcode IS NULL));
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4193 | 4193 |
|
4194 | 4194 |
|
4195 | 4195 |
-- |
4196 |
-- Name: locationevent_unique_within_parent_by_authorlocationcode; Type: INDEX; Schema: public; Owner: -; Tablespace:
|
|
4196 |
-- Name: locationevent_unique_within_parent_by_authoreventcode; Type: INDEX; Schema: public; Owner: -; Tablespace:
|
|
4197 | 4197 |
-- |
4198 | 4198 |
|
4199 |
CREATE UNIQUE INDEX locationevent_unique_within_parent_by_authorlocationcode ON locationevent USING btree ((COALESCE(parent_id, 2147483647)), (COALESCE(authorlocationcode, '\\N'::text))) WHERE ((parent_id IS NOT NULL) AND (authorlocationcode IS NOT NULL));
|
|
4199 |
CREATE UNIQUE INDEX locationevent_unique_within_parent_by_authoreventcode ON locationevent USING btree ((COALESCE(parent_id, 2147483647)), (COALESCE(authoreventcode, '\\N'::text))) WHERE ((parent_id IS NOT NULL) AND (authoreventcode IS NOT NULL));
|
|
4200 | 4200 |
|
4201 | 4201 |
|
4202 | 4202 |
-- |
... | ... | |
4210 | 4210 |
-- Name: locationevent_unique_within_project; Type: INDEX; Schema: public; Owner: -; Tablespace: |
4211 | 4211 |
-- |
4212 | 4212 |
|
4213 |
CREATE UNIQUE INDEX locationevent_unique_within_project ON locationevent USING btree ((COALESCE(project_id, 2147483647)), (COALESCE(authorlocationcode, '\\N'::text)), (COALESCE(obsstartdate, 'infinity'::timestamp with time zone))) WHERE ((((parent_id IS NULL) AND (project_id IS NOT NULL)) AND (authorlocationcode IS NOT NULL)) AND (obsstartdate IS NOT NULL));
|
|
4213 |
CREATE UNIQUE INDEX locationevent_unique_within_project ON locationevent USING btree ((COALESCE(project_id, 2147483647)), (COALESCE(authoreventcode, '\\N'::text)), (COALESCE(obsstartdate, 'infinity'::timestamp with time zone))) WHERE ((((parent_id IS NULL) AND (project_id IS NOT NULL)) AND (authoreventcode IS NOT NULL)) AND (obsstartdate IS NOT NULL));
|
|
4214 | 4214 |
|
4215 | 4215 |
|
4216 | 4216 |
-- |
mappings/VegCSV-VegBIEN.specimens.csv | ||
---|---|---|
17 | 17 |
samplingProtocol,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42 |
18 | 18 |
projectName,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
19 | 19 |
projectID,/location/locationevent/*_id/project/sourceaccessioncode,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
20 |
plotName,/location/locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
|
|
20 |
plotName,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
|
|
21 | 21 |
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
22 | 22 |
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
23 | 23 |
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
24 | 24 |
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
25 | 25 |
parentPlotID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
26 | 26 |
parentPlotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
27 |
parentPlotName,/location/locationevent/parent_id/locationevent/authorlocationcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
|
|
27 |
parentPlotName,/location/locationevent/parent_id/locationevent/authoreventcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
|
|
28 | 28 |
parentPlotID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
29 | 29 |
precipitation,/location/locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13 |
30 | 30 |
acidity,/location/locationevent/soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42 |
mappings/for_review/VegCSV-VegBIEN.specimens.csv | ||
---|---|---|
17 | 17 |
samplingProtocol,//method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42 |
18 | 18 |
projectName,//project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1" |
19 | 19 |
projectID,//project/sourceaccessioncode,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
20 |
plotName,//locationevent/authorlocationcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
|
|
20 |
plotName,//locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
|
|
21 | 21 |
communityID,//*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0" |
22 | 22 |
communityName,//commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0 |
23 | 23 |
plotEventEndDate,//locationevent/obsenddate/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6" |
24 | 24 |
plotEventStartDate,//locationevent/obsstartdate/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5" |
25 | 25 |
parentPlotID,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
26 | 26 |
parentPlotName,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1" |
27 |
parentPlotName,//locationevent/authorlocationcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
|
|
27 |
parentPlotName,//locationevent/authoreventcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
|
|
28 | 28 |
parentPlotID,//locationevent/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#occurrenceID","3, 0" |
29 | 29 |
precipitation,//locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13 |
30 | 30 |
acidity,//soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42 |
Also available in: Unified diff
schemas/vegbien.sql: locationevent: Renamed authorlocationcode to authoreventcode to be consistent with the table name. Note that for our current datasources, the plot = the plot event, so the authoreventcode and authorlocationcode/authorPlotCode will be the same.