Project

General

Profile

« Previous | Next » 

Revision 3962

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/DwC2-VegBIEN.specimens.csv: collectionID: Fixed mapping to point to collectioncode_dwc instead of collectionnumber, as this is an ID of the collection rather than within it

View differences:

mappings/for_review/DwC2-VegBIEN.specimens.csv
20 20 
sex,"//plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
21 21 
catalogNumber,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
22 22 
collectionCode,//specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
23 
collectionID,//specimenreplicate/collectioncode_dwc,,http://rs.tdwg.org/dwc/terms/#collectionID,9
23 24 
recordNumber,//specimenreplicate/collectionnumber,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
24 
collectionID,//specimenreplicate/collectionnumber,,http://rs.tdwg.org/dwc/terms/#collectionID,9
25 25 
fieldNumber,//specimenreplicate/collectionnumber,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
26 26 
institutionCode,//party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
27 27 
occurrenceID,//specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
mappings/DwC.cs-VegBIEN.specimens.csv
35 35 
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54
36 36 
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
37 37 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
38 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
38 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
39 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
39 40 
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
40 41 
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
41 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
42 42 
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
43 43 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
44 44 
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/tdwg_dw_core.xsd#/GlobalUniqueIdentifier; http://rs.tdwg.org/dwc/terms/#occurrenceID,0; 19
inputs/MT/test/import.specimens.xml.ref
35 35 
                <aggregateoccurrence>
36 36 
                    <plantobservation>
37 37 
                        <specimenreplicate>
38 
                            <collectioncode_dwc>$collectionCode</collectioncode_dwc>
39 
                            <collectionnumber><_alt><2>$collectionID</2></_alt></collectionnumber>
38 
                            <collectioncode_dwc>
39 
                                <_alt>
40 
                                    <1>$collectionCode</1>
41 
                                    <2>$collectionID</2>
42 
                                </_alt>
43 
                            </collectioncode_dwc>
40 44 
                            <institution_id><party><organizationname>$institutionCode</organizationname></party></institution_id>
41 45 
                            <sourceaccessioncode>$id</sourceaccessioncode>
42 46 
                        </specimenreplicate>
inputs/MT/maps/VegBIEN.specimens.csv
1 1 
MT[DwC],VegBIEN:,Comments,Source,Order within table
2 2 
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
3 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
4 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
3 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
4 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
5 5 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
6 6 
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,"ACAD#id, MT#id, QMOR#id, U#ID; http://rs.tdwg.org/dwc/terms/#occurrenceID",19
7 7 
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",,http://rs.tdwg.org/dwc/terms/#establishmentMeans,30
inputs/XAL/test/import.specimens.xml.ref
185 185 
                        </definedvalue>
186 186 
                        <specimenreplicate>
187 187 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
188 
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
188 
                            <collectioncode_dwc><_alt><1>$CollectionCode</1></_alt></collectioncode_dwc>
189 189 
                            <collectionnumber>
190 190 
                                <_alt>
191 191 
                                    <1><_alt><1>$CollectorNumber</1></_alt></1>
inputs/XAL/maps/VegBIEN.specimens.csv
17 17 
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54
18 18 
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
19 19 
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
20 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
20 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
21 21 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
22 22 
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
23 23 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
inputs/NY/test/import.specimens.xml.ref
211 211 
                        </definedvalue>
212 212 
                        <specimenreplicate>
213 213 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
214 
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
214 
                            <collectioncode_dwc><_alt><1>$CollectionCode</1></_alt></collectioncode_dwc>
215 215 
                            <collectionnumber>
216 216 
                                <_alt>
217 217 
                                    <1><_alt><1>$CollectorNumber</1></_alt></1>
inputs/NY/maps/VegBIEN.specimens.csv
19 19 
PlantFungusDescription,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/2/_label[label=""plant fungus""]/value",,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54
20 20 
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
21 21 
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
22 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
22 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
23 23 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
24 24 
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
25 25 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
inputs/UNCC/test/import.specimens.xml.ref
95 95 
                    </notes>
96 96 
                    <plantobservation>
97 97 
                        <specimenreplicate>
98 
                            <collectioncode_dwc>$herbarium</collectioncode_dwc>
98 
                            <collectioncode_dwc><_alt><1>$herbarium</1></_alt></collectioncode_dwc>
99 99 
                            <collectionnumber><_alt><1><_alt><1>$collectno</1></_alt></1></_alt></collectionnumber>
100 100 
                            <sourceaccessioncode>$accession</sourceaccessioncode>
101 101 
                        </specimenreplicate>
inputs/UNCC/maps/VegBIEN.specimens.csv
12 12 
campus,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/5/_label[label=""campus""]/value",,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
13 13 
loanto,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/6/_label[label=""loaned to""]/value",,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
14 14 
inorout,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/7/_label[label=""in or out""]/value",,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
15 
herbarium,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
15 
herbarium,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
16 16 
collectno,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
17 17 
accession,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
18 18 
cultivated,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value/_map:[Y=cultivated,N=wild,*=]/value",Ignore other values,http://rs.tdwg.org/dwc/terms/#establishmentMeans,30
inputs/ACAD/test/import.specimens.xml.ref
62 62 
                    <plantobservation>
63 63 
                        <specimenreplicate>
64 64 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$catalogNumber</catalognumber_dwc></else></_if>
65 
                            <collectioncode_dwc>$collectionCode</collectioncode_dwc>
66 
                            <collectionnumber>
65 
                            <collectioncode_dwc>
67 66 
                                <_alt>
68 
                                    <1><_alt><2>$recordNumber</2></_alt></1>
67 
                                    <1>$collectionCode</1>
69 68 
                                    <2>$collectionID</2>
70 69 
                                </_alt>
71 
                            </collectionnumber>
70 
                            </collectioncode_dwc>
71 
                            <collectionnumber><_alt><1><_alt><2>$recordNumber</2></_alt></1></_alt></collectionnumber>
72 72 
                            <institution_id><party><organizationname>$institutionCode</organizationname></party></institution_id>
73 73 
                            <sourceaccessioncode>$id</sourceaccessioncode>
74 74 
                        </specimenreplicate>
inputs/ACAD/maps/VegBIEN.specimens.csv
7 7 
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
8 8 
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,,http://rs.tdwg.org/dwc/terms/#eventDate,44
9 9 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
10 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
10 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
11 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
11 12 
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
12 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
13 13 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
14 14 
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,"ACAD#id, MT#id, QMOR#id, U#ID; http://rs.tdwg.org/dwc/terms/#occurrenceID",19
15 15 
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,http://rs.tdwg.org/dwc/terms/#dateIdentified,120
inputs/REMIB/test/import.specimens.xml.ref
91 91 
                    </collectiondate>
92 92 
                    <plantobservation>
93 93 
                        <specimenreplicate>
94 
                            <collectioncode_dwc>$acronym</collectioncode_dwc>
94 
                            <collectioncode_dwc><_alt><1>$acronym</1></_alt></collectioncode_dwc>
95 95 
                            <sourceaccessioncode>$accession_number</sourceaccessioncode>
96 96 
                        </specimenreplicate>
97 97 
                    </plantobservation>
inputs/REMIB/maps/VegBIEN.specimens.csv
7 7 
coll_day,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/DayCollected; http://rs.tdwg.org/dwc/terms/#eventDate,11; 44
8 8 
coll_month,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/MonthCollected; http://rs.tdwg.org/dwc/terms/#eventDate,10; 44
9 9 
coll_year,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/YearCollected; http://rs.tdwg.org/dwc/terms/#eventDate,9; 44
10 
acronym,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
10 
acronym,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
11 11 
accession_number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
12 12 
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://rs.tdwg.org/dwc/terms/#specificEpithet,149
13 13 
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/#genus,147
inputs/ARIZ/test/import.specimens.xml.ref
197 197 
                        </definedvalue>
198 198 
                        <specimenreplicate>
199 199 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumberNumeric</catalognumber_dwc></else></_if>
200 
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
200 
                            <collectioncode_dwc><_alt><1>$CollectionCode</1></_alt></collectioncode_dwc>
201 201 
                            <collectionnumber>
202 202 
                                <_alt>
203 203 
                                    <1><_alt><1>$CollectorNumber</1></_alt></1>
inputs/ARIZ/maps/VegBIEN.specimens.csv
21 21 
FieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
22 22 
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
23 23 
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
24 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
24 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
25 25 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
26 26 
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
27 27 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
inputs/GBIF/test/import.specimens.xml.ref
142 142 
                    <plantobservation>
143 143 
                        <specimenreplicate>
144 144 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNO</catalognumber_dwc></else></_if>
145 
                            <collectioncode_dwc>$CollectionCD</collectioncode_dwc>
145 
                            <collectioncode_dwc><_alt><1>$CollectionCD</1></_alt></collectioncode_dwc>
146 146 
                            <institution_id><party><organizationname>$InstitutionCD</organizationname></party></institution_id>
147 147 
                        </specimenreplicate>
148 148 
                    </plantobservation>
inputs/GBIF/maps/VegBIEN.specimens.csv
13 13 
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
14 14 
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,,http://rs.tdwg.org/dwc/terms/#eventDate,44
15 15 
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
16 
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
16 
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
17 17 
InstitutionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
18 18 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
19 19 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
inputs/NCU-NCSC/test/import.specimens.xml.ref
67 67 
                    <plantobservation>
68 68 
                        <specimenreplicate>
69 69 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$Barcode</catalognumber_dwc></else></_if>
70 
                            <collectioncode_dwc>$SeriesName</collectioncode_dwc>
70 
                            <collectioncode_dwc><_alt><1>$SeriesName</1></_alt></collectioncode_dwc>
71 71 
                            <sourceaccessioncode>$Accession Number</sourceaccessioncode>
72 72 
                        </specimenreplicate>
73 73 
                    </plantobservation>
inputs/NCU-NCSC/maps/VegBIEN.specimens.csv
7 7 
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
8 8 
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/3,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien2_staging&table=nybg_raw&target=tbl_structure.php#CollectedDate; http://rs.tdwg.org/dwc/terms/#eventDate,29; 44
9 9 
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
10 
SeriesName,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
10 
SeriesName,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
11 11 
Accession Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
12 12 
Cultivated?,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,http://rs.tdwg.org/dwc/terms/#establishmentMeans,30
13 13 
Cultivated?,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",,http://rs.tdwg.org/dwc/terms/#establishmentMeans,30
inputs/SpeciesLink/test/import.specimens.xml.ref
283 283 
                            </_if>
284 284 
                            <collectioncode_dwc>
285 285 
                                <_alt>
286 
                                    <0>$dwc_dwcore_CollectionCode</0>
287 
                                    <1>$conceptual_darwin_2003_1_0_CollectionCode</1>
288 
                                    <2>$dwc_terms_collectionCode</2>
286 
                                    <1>
287 
                                        <_alt>
288 
                                            <0>$dwc_dwcore_CollectionCode</0>
289 
                                            <1>$conceptual_darwin_2003_1_0_CollectionCode</1>
290 
                                            <2>$dwc_terms_collectionCode</2>
291 
                                        </_alt>
292 
                                    </1>
293 
                                    <2>$dwc_terms_collectionID</2>
289 294 
                                </_alt>
290 295 
                            </collectioncode_dwc>
291 296 
                            <collectionnumber>
......
301 306 
                                            <2>$dwc_terms_recordNumber</2>
302 307 
                                        </_alt>
303 308 
                                    </1>
304 
                                    <2>$dwc_terms_collectionID</2>
305 309 
                                    <3>
306 310 
                                        <_alt>
307 311 
                                            <0>$dwc_curatorial_FieldNumber</0>
inputs/SpeciesLink/maps/VegBIEN.specimens.csv
44 44 
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
45 45 
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
46 46 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
47 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
48 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
47 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
48 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
49 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
49 50 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
50 51 
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
51 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
52 52 
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
53 53 
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
54 54 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
inputs/MO/test/import.specimens.xml.ref
175 175 
                    <plantobservation>
176 176 
                        <specimenreplicate>
177 177 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
178 
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
178 
                            <collectioncode_dwc><_alt><1>$CollectionCode</1></_alt></collectioncode_dwc>
179 179 
                            <collectionnumber><_alt><1><_alt><1>$CollectorNumber</1></_alt></1></_alt></collectionnumber>
180 180 
                            <institution_id><party><organizationname>$InstitutionCode</organizationname></party></institution_id>
181 181 
                        </specimenreplicate>
inputs/MO/maps/VegBIEN.specimens.csv
15 15 
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/YearCollected; http://rs.tdwg.org/dwc/terms/#eventDate,9; 44
16 16 
convertednotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54
17 17 
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
18 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
18 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
19 19 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
20 20 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
21 21 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
inputs/QMOR/test/import.specimens.xml.ref
159 159 
                        </definedvalue>
160 160 
                        <specimenreplicate>
161 161 
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$catalogNumber</catalognumber_dwc></else></_if>
162 
                            <collectioncode_dwc>$collectionCode</collectioncode_dwc>
163 
                            <collectionnumber><_alt><2>$collectionID</2></_alt></collectionnumber>
162 
                            <collectioncode_dwc>
163 
                                <_alt>
164 
                                    <1>$collectionCode</1>
165 
                                    <2>$collectionID</2>
166 
                                </_alt>
167 
                            </collectioncode_dwc>
164 168 
                            <institution_id><party><organizationname>$institutionCode</organizationname></party></institution_id>
165 169 
                            <sourceaccessioncode>$id</sourceaccessioncode>
166 170 
                        </specimenreplicate>
inputs/QMOR/maps/VegBIEN.specimens.csv
17 17 
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,,http://rs.tdwg.org/dwc/terms/#eventDate,44
18 18 
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
19 19 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
20 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
21 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
20 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
21 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
22 22 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
23 23 
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,"ACAD#id, MT#id, QMOR#id, U#ID; http://rs.tdwg.org/dwc/terms/#occurrenceID",19
24 24 
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,,http://rs.tdwg.org/dwc/terms/#dateIdentified,120
mappings/DwC2-VegBIEN.specimens.csv
19 19 
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
20 20 
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
21 21 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
22 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
22 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
23 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
23 24 
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
24 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
25 25 
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
26 26 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
27 27 
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
mappings/DwC-VegBIEN.specimens.csv
71 71 
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
72 72 
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
73 73 
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
74 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
75 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
74 
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
75 
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
76 
CollectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
77 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
76 78 
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
77 79 
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
78 80 
RecordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
79 81 
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
80 
CollectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
81 
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,,http://rs.tdwg.org/dwc/terms/#collectionID,9
82 82 
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
83 83 
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
84 84 
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11

Also available in: Unified diff