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Revision 3968

mappings/VegCSV-VegBIEN.specimens.csv: Removed Source column and source-related comments because this information is now maintained in mappings/Veg+.terms.csv

View differences:

inputs/Madidi/maps/VegBIEN.plots.csv
1
Madidi,VegBIEN:,Comments,Source,Order within table
2
Area,/location/area,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
3
Altitude,/location/elevation/_alt/1,,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
4
Minimum altitude,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
5
Minimum altitude,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
6
Topographical situation,/location/landform,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/landform,18
7
Latitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
8
Latitude (DMS),"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
9
Longitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
10
Longitude (DMS),"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
11
Expedition name,/location/locationevent/*_id/project/projectname,Consistent (globally unique) between PPM and PT data,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1"
12
Expedition number,/location/locationevent/*_id/project/sourceaccessioncode,Consistent (globally unique) between PPM and PT data,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
13
Inventory name,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
14
Vegetation type,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
15
Locality description,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Often begins with the text in Vegetation type; Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0
16
First evaluation,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
17
Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
18
"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)",/location/locationevent/soilobs/calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
19
"Carbón Orgánico (WSP S-9,10–%–0.06)",/location/locationevent/soilobs/carbon,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
20
CIC (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap","13, 44"
21
Arcilla (DIN 18 123–%–1),/location/locationevent/soilobs/clay,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
22
Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),/location/locationevent/soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
23
"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilobs/magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
24
Nitrógeno total (ISRIC 6–%–0.0014),/location/locationevent/soilobs/nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
25
"Materia Orgánica (WSP S-9,10–%–0.1)",/location/locationevent/soilobs/organic,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
26
pH acuoso (ISRIC 4–– 1 - 14),/location/locationevent/soilobs/ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
27
Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),/location/locationevent/soilobs/phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
28
"Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)",/location/locationevent/soilobs/potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
29
Arena (DIN 18 123–%–2.5),/location/locationevent/soilobs/sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
30
Limo (DIN 18 123–%–1),/location/locationevent/soilobs/silt,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
31
"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilobs/sodium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
32
Textural class,/location/locationevent/soilobs/texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
33
Inventory code,/location/locationevent/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#locationID,56
34
Locality,/location/locationnarrative,,http://rs.tdwg.org/dwc/terms/#locality,68
35
Observaciones,/location/notespublic,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54"
36
Direction,/location/slopeaspect/_compass/value/_alt/1,Part files provide either this field or Direction,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
37
Orientación/exposicion,/location/slopeaspect/_compass/value/_alt/2,Part files provide either this field or Orientación,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
38
Slope,/location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
39
Inventory code,/location/sourceaccessioncode/_merge/2/_alt/1,,http://rs.tdwg.org/dwc/terms/#locationID,56
40
Inventory name,/location/sourceaccessioncode/_merge/2/_alt/2,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
Madidi,VegBIEN:,Comments
2
Area,/location/area,
3
Altitude,/location/elevation/_alt/1,
4
Minimum altitude,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",
5
Minimum altitude,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",
6
Topographical situation,/location/landform,
7
Latitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",
8
Latitude (DMS),"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",
9
Longitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",
10
Longitude (DMS),"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",
11
Expedition name,/location/locationevent/*_id/project/projectname,Consistent (globally unique) between PPM and PT data
12
Expedition number,/location/locationevent/*_id/project/sourceaccessioncode,Consistent (globally unique) between PPM and PT data
13
Inventory name,/location/locationevent/authoreventcode,
14
Vegetation type,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
15
Locality description,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Often begins with the text in Vegetation type
16
First evaluation,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,
17
Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilobs/acidity,
18
"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)",/location/locationevent/soilobs/calcium,
19
"Carbón Orgánico (WSP S-9,10–%–0.06)",/location/locationevent/soilobs/carbon,
20
CIC (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilobs/cationexchangecapacity,
21
Arcilla (DIN 18 123–%–1),/location/locationevent/soilobs/clay,
22
Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),/location/locationevent/soilobs/conductivity,
23
"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilobs/magnesium,
24
Nitrógeno total (ISRIC 6–%–0.0014),/location/locationevent/soilobs/nitrogen,
25
"Materia Orgánica (WSP S-9,10–%–0.1)",/location/locationevent/soilobs/organic,
26
pH acuoso (ISRIC 4–– 1 - 14),/location/locationevent/soilobs/ph,
27
Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),/location/locationevent/soilobs/phosphorus,
28
"Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)",/location/locationevent/soilobs/potassium,
29
Arena (DIN 18 123–%–2.5),/location/locationevent/soilobs/sand,
30
Limo (DIN 18 123–%–1),/location/locationevent/soilobs/silt,
31
"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilobs/sodium,
32
Textural class,/location/locationevent/soilobs/texture,
33
Inventory code,/location/locationevent/sourceaccessioncode,
34
Locality,/location/locationnarrative,
35
Observaciones,/location/notespublic,
36
Direction,/location/slopeaspect/_compass/value/_alt/1,Part files provide either this field or Direction
37
Orientación/exposicion,/location/slopeaspect/_compass/value/_alt/2,Part files provide either this field or Orientación
38
Slope,/location/slopegradient,
39
Inventory code,/location/sourceaccessioncode/_merge/2/_alt/1,
40
Inventory name,/location/sourceaccessioncode/_merge/2/_alt/2,
41 41
Collaborators,,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
42 42
Coordinates,,Concatenation of Latitude (DMS) and Longitude (DMS)
43 43
Installed and evaluated by,,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
inputs/Madidi/maps/VegBIEN.organisms.csv
1
Madidi,VegBIEN:,Comments,Source,Order within table
1
Madidi,VegBIEN:,Comments
2 2
Autor (revised),,** No input mapping for Autor (revised) ** 
3 3
Basal area,,** No input mapping for Basal area ** 
4 4
Bole height,,** No input mapping for Bole height ** 
inputs/CVS/maps/VegBIEN.organisms.csv
1
CVS,VegBIEN:,Comments,Source,Order within table
2
locationAccuracy-m,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,http://rs.tdwg.org/dwc/terms/#coordinateUncertaintyInMeters,88
3
realLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
4
publicLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
5
realLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
6
publicLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
7
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,http://rs.tdwg.org/dwc/terms/#county,66
8
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,http://rs.tdwg.org/dwc/terms/#stateProvince,65
9
authorObsCode,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
10
obsStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
11
%cover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0
12
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,,http://rs.tdwg.org/dwc/terms/#scientificName,134
13
currentTaxonName sec Weakley 2006,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first",,http://rs.tdwg.org/dwc/terms/#scientificName,134
14
authorObsCode,/location/sourceaccessioncode/_merge/2/_alt/2,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
CVS,VegBIEN:,Comments
2
locationAccuracy-m,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
3
realLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",
4
publicLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",
5
realLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/1",
6
publicLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value/_alt/2",
7
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
8
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
9
authorObsCode,/location/locationevent/authoreventcode,
10
obsStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,
11
%cover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
12
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,
13
currentTaxonName sec Weakley 2006,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first",
14
authorObsCode,/location/sourceaccessioncode/_merge/2/_alt/2,
15 15
confidentialityStatus,,** No input mapping for confidentialityStatus ** 
inputs/SALVIAS-CSV/maps/VegBIEN.plots.csv
1
SALVIAS-CSV,VegBIEN:,Comments,Source,Order within table
2
plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed; Table added for clarity",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
3
elev_m,/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
4
elev_max_m,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
5
elev_min_m,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
6
elev_min_m,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
7
elev_max_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
8
lat_decimal,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
9
long_decimal,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
10
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish,http://rs.tdwg.org/dwc/terms/#county,66
11
pol1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince,http://rs.tdwg.org/dwc/terms/#stateProvince,65
12
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
13
major_geo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
14
plot_methodology,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42
15
project,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1"
16
plot_code,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
17
holdridge_life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
18
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0
19
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
20
date_start,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
21
precip_mm,/location/locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
22
soil_acidity,"/location/locationevent/soilobs/acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
23
soil_base,"/location/locationevent/soilobs/basesaturation/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
24
soil_Ca,"/location/locationevent/soilobs/calcium/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
25
soil_C,"/location/locationevent/soilobs/carbon/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
26
soil_cation_cap,/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap","13, 44"
27
clay_percent,"/location/locationevent/soilobs/clay/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
28
soil_conductivity,/location/locationevent/soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
29
soil_Mg,"/location/locationevent/soilobs/magnesium/_units:[default=""%"",to=]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
30
soil_N,"/location/locationevent/soilobs/nitrogen/_units:[default=""%"",to=]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
31
organic_percent,"/location/locationevent/soilobs/organic/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
32
pH,/location/locationevent/soilobs/ph,"Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss.",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
33
soil_P,"/location/locationevent/soilobs/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
34
soil_K,"/location/locationevent/soilobs/potassium/_units:[default=""%"",to=]/value",Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
35
sand_percent,"/location/locationevent/soilobs/sand/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
36
silt_percent,"/location/locationevent/soilobs/silt/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
37
soil_Na,"/location/locationevent/soilobs/sodium/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
38
soil_texture,/location/locationevent/soilobs/texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
39
PLOT_ID,/location/locationevent/sourceaccessioncode,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata.",http://rs.tdwg.org/dwc/terms/#locationID,56
40
temp_c,/location/locationevent/temperature,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/observationConditions/temperature,1900
41
locality_description,/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX",http://rs.tdwg.org/dwc/terms/#locality,68
42
slope_aspect,/location/slopeaspect/_compass/value,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
43
slope_gradient,/location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
44
PLOT_ID,/location/sourceaccessioncode/_merge/2/_alt/1,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata.",http://rs.tdwg.org/dwc/terms/#locationID,56
45
plot_code,/location/sourceaccessioncode/_merge/2/_alt/2,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
SALVIAS-CSV,VegBIEN:,Comments
2
plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
3
elev_m,/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.
4
elev_max_m,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
5
elev_min_m,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",
6
elev_min_m,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",
7
elev_max_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
8
lat_decimal,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
9
long_decimal,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
10
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
11
pol1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
12
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
13
major_geo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
14
plot_methodology,/location/locationevent/*_id/method/name,
15
project,/location/locationevent/*_id/project/projectname,
16
plot_code,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
17
holdridge_life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
18
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
19
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,
20
date_start,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,
21
precip_mm,/location/locationevent/precipitation,
22
soil_acidity,"/location/locationevent/soilobs/acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",
23
soil_base,"/location/locationevent/soilobs/basesaturation/_units:[default=""%"",to=]/value",
24
soil_Ca,"/location/locationevent/soilobs/calcium/_units:[default=""%"",to=]/value",
25
soil_C,"/location/locationevent/soilobs/carbon/_units:[default=""%"",to=]/value",
26
soil_cation_cap,/location/locationevent/soilobs/cationexchangecapacity,
27
clay_percent,"/location/locationevent/soilobs/clay/_units:[default=""%"",to=]/value",
28
soil_conductivity,/location/locationevent/soilobs/conductivity,
29
soil_Mg,"/location/locationevent/soilobs/magnesium/_units:[default=""%"",to=]/value",
30
soil_N,"/location/locationevent/soilobs/nitrogen/_units:[default=""%"",to=]/value",
31
organic_percent,"/location/locationevent/soilobs/organic/_units:[default=""%"",to=]/value",
32
pH,/location/locationevent/soilobs/ph,"Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
33
soil_P,"/location/locationevent/soilobs/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
34
soil_K,"/location/locationevent/soilobs/potassium/_units:[default=""%"",to=]/value",
35
sand_percent,"/location/locationevent/soilobs/sand/_units:[default=""%"",to=]/value",
36
silt_percent,"/location/locationevent/soilobs/silt/_units:[default=""%"",to=]/value",
37
soil_Na,"/location/locationevent/soilobs/sodium/_units:[default=""%"",to=]/value",
38
soil_texture,/location/locationevent/soilobs/texture,
39
PLOT_ID,/location/locationevent/sourceaccessioncode,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
40
temp_c,/location/locationevent/temperature,
41
locality_description,/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"
42
slope_aspect,/location/slopeaspect/_compass/value,
43
slope_gradient,/location/slopegradient,
44
PLOT_ID,/location/sourceaccessioncode/_merge/2/_alt/1,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
45
plot_code,/location/sourceaccessioncode/_merge/2/_alt/2,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
46 46
observation_type,,"Brad: SALVIAS internal metadata indicating whether the record represents an individual or aggregate observation. Rather than storing, use to decide where to store in VegX.; Aaron: VegX aggregateOrganismObservation table is missing many fields available in individualOrganismObservation, so we're mapping to individualOrganismObservation regardless of observation type"
47 47
recensused,,"Brad: This is a 0/1 value, internal to SALVIAS. 1 indicates that a  plot has >1 set of values, from different census events.; Aaron: Different censuses are distinguished in organisms data by different census_no values"
inputs/SALVIAS-CSV/maps/VegBIEN.organisms.csv
1
SALVIAS-CSV,VegBIEN:,Comments,Source,Order within table
2
subplot,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
3
census_date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_date/year,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
4
PLOT_ID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
5
plot_code,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
6
plot_code,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
7
PLOT_ID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
8
no_of_individuals,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25
9
cover_percent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0
10
census_no,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue","Brad: Assigned by SALVIAS. 1 for first plot, then 2, 3, etc. I can't recall if we even have repeat censuses in SALVIAS. Probably not.; Expanded for clarity",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.census_no,3
11
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,"Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance.",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/volumeCanopy,3
12
individual_code,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot.",http://rs.tdwg.org/dwc/terms/#recordNumber,22
13
OBSERVATION_ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later.",http://rs.tdwg.org/dwc/terms/#occurrenceID,19
14
det_type,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen.; values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
15
coll_number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
16
voucher_string,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below.",http://rs.tdwg.org/dwc/terms/#catalogNumber,20
17
no_of_individuals,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25
18
basal_diam,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.basal_diam,37
19
stem_canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,40
20
stem_canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,41
21
stem_liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,42
22
notes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_notes,8
23
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,36
24
height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
25
stem_height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,"Brad: Same as for height, but applies to individuals stems, not trees. Rare.",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
26
ht_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
27
stem_height_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,"Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare.",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
28
tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/1","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Number removed for clarity; Quotes sort it before tag2",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
29
stem_tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/2","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems.; Number removed for clarity; Quotes sort it before tag2",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
30
tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/1,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other.; Number replaced with named prefix for clarity",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
31
stem_tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/2,Brad: see above; Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
32
x_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,"Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX.; Table added for clarity",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
33
y_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Brad: See comment above for x_position; Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
34
habit,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=]/value","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait.",http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
35
OBSERVATION_ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later.",http://rs.tdwg.org/dwc/terms/#occurrenceID,19
36
individual_code,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot.",http://rs.tdwg.org/dwc/terms/#recordNumber,22
37
orig_species,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/last,Brad: OMIT,http://rs.tdwg.org/dwc/terms/#scientificName,134
38
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#taxonRank","2, 151"
39
specific_authority,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship","2, 153"
40
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#infraspecificEpithet","2, 150"
41
specific_epithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#specificEpithet","2, 149"
42
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#genus","2, 147"
43
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#family","2, 146"
44
cf_aff,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank.",http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
45
cf_aff,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank.",http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
46
orig_species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/last",Brad: OMIT,http://rs.tdwg.org/dwc/terms/#scientificName,134
47
orig_family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",Brad: OMIT,http://rs.tdwg.org/dwc/terms/#family,146
48
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,Brad: See comment above,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/givenName","23, 01"
49
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick.","http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/surName","23, 02"
50
det_type,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen.; values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
51
coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
52
voucher_string,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below.",http://rs.tdwg.org/dwc/terms/#catalogNumber,20
53
PLOT_ID,/location/sourceaccessioncode/_merge/1/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
54
plot_code,/location/sourceaccessioncode/_merge/1/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
55
subplot,/location/sourceaccessioncode/_merge/2/_alt/2,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
SALVIAS-CSV,VegBIEN:,Comments
2
subplot,/location/locationevent/authoreventcode,
3
census_date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_date/year,
4
PLOT_ID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
5
plot_code,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above"
6
plot_code,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above"
7
PLOT_ID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
8
no_of_individuals,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."
9
cover_percent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
10
census_no,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue","Brad: Assigned by SALVIAS. 1 for first plot, then 2, 3, etc. I can't recall if we even have repeat censuses in SALVIAS. Probably not."
11
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,"Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance."
12
individual_code,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
13
OBSERVATION_ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
14
det_type,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
15
coll_number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string
16
voucher_string,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."
17
no_of_individuals,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."
18
basal_diam,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,
19
stem_canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
20
stem_canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
21
stem_liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
22
notes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
23
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
24
height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob
25
stem_height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,"Brad: Same as for height, but applies to individuals stems, not trees. Rare."
26
ht_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob
27
stem_height_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,"Brad: Should also be userDefined for VegBank. Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
28
tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/1","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Quotes sort it before tag2"
29
stem_tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag/_alt/2","Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems.; Quotes sort it before tag2"
30
tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/1,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
31
stem_tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag/_alt/2,Brad: see above
32
x_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,"Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX."
33
y_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Brad: See comment above for x_position
34
habit,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=]/value","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait."
35
OBSERVATION_ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
36
individual_code,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
37
orig_species,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/last,Brad: OMIT
38
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",
39
specific_authority,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
40
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
41
specific_epithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
42
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
43
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
44
cf_aff,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."
45
cf_aff,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."
46
orig_species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/last",Brad: OMIT
47
orig_family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",Brad: OMIT
48
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,Brad: See comment above
49
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
50
det_type,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
51
coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string
52
voucher_string,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."
53
PLOT_ID,/location/sourceaccessioncode/_merge/1/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
54
plot_code,/location/sourceaccessioncode/_merge/1/_alt/2,"Brad: Same as plotCode, above"
55
subplot,/location/sourceaccessioncode/_merge/2/_alt/2,
56 56
collector_code,,Brad: OMIT
57 57
comments,,Brad: OMIT
58 58
fam_status,,Brad: OMIT. This will be determined later by using TNRS.
inputs/SALVIAS/maps/VegBIEN.stems.csv
1
SALVIAS,VegBIEN:,Comments,Source,Order within table
2
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,,http://rs.tdwg.org/dwc/terms/#individualCount,25
3
PlotObsID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
4
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,http://rs.tdwg.org/dwc/terms/#individualCount,25
5
basal_diam,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.basal_diam,37
6
stem_canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,40
7
stem_canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,41
8
gentry_dbh,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#gentry_dbh,7
9
stem_liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,42
10
stem_notes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_notes,8
11
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,36
12
stem_height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
13
stem_height_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
14
stem_tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Number removed for clarity; Quotes sort it before tag2,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
15
stem_tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
16
PlotObsID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
1
SALVIAS,VegBIEN:,Comments
2
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
3
PlotObsID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
4
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
5
basal_diam,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,
6
stem_canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
7
stem_canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
8
gentry_dbh,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
9
stem_liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
10
stem_notes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
11
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
12
stem_height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,
13
stem_height_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,
14
stem_tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
15
stem_tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
16
PlotObsID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
17 17
origrecord_id_stems,,** No input mapping for origrecord_id_stems ** 
18 18
stem_id,,** No input mapping for stem_id ** 
19 19
tmp_del,,** No input mapping for tmp_del ** 
inputs/SALVIAS/maps/VegBIEN.plots.csv
1
SALVIAS,VegBIEN:,Comments,Source,Order within table
2
plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed; Table added for clarity",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
3
Elev,/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
4
elev_max_m,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
5
elev_min_m,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
6
elev_min_m,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
7
elev_max_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
8
LatDec,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
9
LongDec,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
10
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish,http://rs.tdwg.org/dwc/terms/#county,66
11
PolDiv1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince,http://rs.tdwg.org/dwc/terms/#stateProvince,65
12
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
13
MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
14
PlotMethod,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42
15
project_id,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1"
16
SiteCode,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
17
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
18
life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0
19
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
20
date_start,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
21
Precip,/location/locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
22
soil_acidity,"/location/locationevent/soilobs/acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
23
soil_base,"/location/locationevent/soilobs/basesaturation/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
24
soil_Ca,"/location/locationevent/soilobs/calcium/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
25
soil_C,"/location/locationevent/soilobs/carbon/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
26
soil_cation_cap,/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap","13, 44"
27
clay_percent,"/location/locationevent/soilobs/clay/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
28
soil_conductivity,/location/locationevent/soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
29
soil_Mg,"/location/locationevent/soilobs/magnesium/_units:[default=""%"",to=]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
30
soil_N,"/location/locationevent/soilobs/nitrogen/_units:[default=""%"",to=]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
31
organic_percent,"/location/locationevent/soilobs/organic/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
32
pH,/location/locationevent/soilobs/ph,"Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss.",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
33
soil_P,"/location/locationevent/soilobs/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
34
soil_K,"/location/locationevent/soilobs/potassium/_units:[default=""%"",to=]/value",Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
35
sand_percent,"/location/locationevent/soilobs/sand/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
36
silt_percent,"/location/locationevent/soilobs/silt/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
37
soil_Na,"/location/locationevent/soilobs/sodium/_units:[default=""%"",to=]/value",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
38
soil_texture,"/location/locationevent/soilobs/texture/_units:[default=""%"",to=]/value",,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
39
PlotID,/location/locationevent/sourceaccessioncode,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata.",http://rs.tdwg.org/dwc/terms/#locationID,56
40
Temp,/location/locationevent/temperature,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/observationConditions/temperature,1900
41
Locality_Description,/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX",http://rs.tdwg.org/dwc/terms/#locality,68
42
slope_aspect,/location/slopeaspect/_compass/value,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
43
slope_gradient,/location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
44
PlotID,/location/sourceaccessioncode/_merge/2/_alt/1,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata.",http://rs.tdwg.org/dwc/terms/#locationID,56
45
SiteCode,/location/sourceaccessioncode/_merge/2/_alt/2,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project),http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
SALVIAS,VegBIEN:,Comments
2
plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
3
Elev,/location/elevation/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.
4
elev_max_m,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
5
elev_min_m,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",
6
elev_min_m,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",
7
elev_max_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
8
LatDec,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
9
LongDec,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
10
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
11
PolDiv1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
12
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
13
MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
14
PlotMethod,/location/locationevent/*_id/method/name,
15
project_id,/location/locationevent/*_id/project/projectname,
16
SiteCode,/location/locationevent/authoreventcode,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
17
life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
18
life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
19
date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_*/date,
20
date_start,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_*/date,
21
Precip,/location/locationevent/precipitation,
22
soil_acidity,"/location/locationevent/soilobs/acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",
23
soil_base,"/location/locationevent/soilobs/basesaturation/_units:[default=""%"",to=]/value",
24
soil_Ca,"/location/locationevent/soilobs/calcium/_units:[default=""%"",to=]/value",
25
soil_C,"/location/locationevent/soilobs/carbon/_units:[default=""%"",to=]/value",
26
soil_cation_cap,/location/locationevent/soilobs/cationexchangecapacity,
27
clay_percent,"/location/locationevent/soilobs/clay/_units:[default=""%"",to=]/value",
28
soil_conductivity,/location/locationevent/soilobs/conductivity,
29
soil_Mg,"/location/locationevent/soilobs/magnesium/_units:[default=""%"",to=]/value",
30
soil_N,"/location/locationevent/soilobs/nitrogen/_units:[default=""%"",to=]/value",
31
organic_percent,"/location/locationevent/soilobs/organic/_units:[default=""%"",to=]/value",
32
pH,/location/locationevent/soilobs/ph,"Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
33
soil_P,"/location/locationevent/soilobs/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
34
soil_K,"/location/locationevent/soilobs/potassium/_units:[default=""%"",to=]/value",
35
sand_percent,"/location/locationevent/soilobs/sand/_units:[default=""%"",to=]/value",
36
silt_percent,"/location/locationevent/soilobs/silt/_units:[default=""%"",to=]/value",
37
soil_Na,"/location/locationevent/soilobs/sodium/_units:[default=""%"",to=]/value",
38
soil_texture,"/location/locationevent/soilobs/texture/_units:[default=""%"",to=]/value",
39
PlotID,/location/locationevent/sourceaccessioncode,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
40
Temp,/location/locationevent/temperature,
41
Locality_Description,/location/locationnarrative,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"
42
slope_aspect,/location/slopeaspect/_compass/value,
43
slope_gradient,/location/slopegradient,
44
PlotID,/location/sourceaccessioncode/_merge/2/_alt/1,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
45
SiteCode,/location/sourceaccessioncode/_merge/2/_alt/2,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
46 46
AccessCode,,** No input mapping for AccessCode ** 
47 47
ElevSource,,** No input mapping for ElevSource ** 
48 48
Habitat,,** No input mapping for Habitat ** 
inputs/SALVIAS/maps/VegBIEN.organisms.csv
1
SALVIAS,VegBIEN:,Comments,Source,Order within table
2
Line,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
3
PlotID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
4
PlotCode,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
5
PlotCode,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
6
PlotID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
7
census_date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_*/date,,http://rs.tdwg.org/dwc/terms/#eventDate,44
8
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25
9
cover_percent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0
10
census_no,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue","Brad: Assigned by SALVIAS. 1 for first plot, then 2, 3, etc. I can't recall if we even have repeat censuses in SALVIAS. Probably not.; Expanded for clarity",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.census_no,3
11
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,"Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance.",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/volumeCanopy,3
12
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
13
Ind,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot.",http://rs.tdwg.org/dwc/terms/#recordNumber,22
14
PlotObsID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later.",http://rs.tdwg.org/dwc/terms/#occurrenceID,19
15
DetType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen.; values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
16
coll_number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
17
SourceVoucher,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below.",http://rs.tdwg.org/dwc/terms/#catalogNumber,20
18
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this.",http://rs.tdwg.org/dwc/terms/#individualCount,25
19
canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,40
20
canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,41
21
liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. ,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,42
22
temp_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,36
23
height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
24
ht_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
25
tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Number removed for clarity; Quotes sort it before tag2",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
26
tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other.; Number replaced with named prefix for clarity",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
27
x_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,"Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX.; Table added for clarity",http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
28
y_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Brad: See comment above for x_position; Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
29
Habit,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=]/value","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait.",http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
30
PlotObsID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later.",http://rs.tdwg.org/dwc/terms/#occurrenceID,19
31
Ind,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot.",http://rs.tdwg.org/dwc/terms/#recordNumber,22
32
OrigGenus,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/first,,http://rs.tdwg.org/dwc/terms/#scientificName,134
33
OrigSpecies,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/last,Brad: OMIT,http://rs.tdwg.org/dwc/terms/#scientificName,134
34
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#taxonRank","2, 151"
35
auth,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship","2, 153"
36
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#infraspecificEpithet","2, 150"
37
Species,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#specificEpithet","2, 149"
38
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#genus","2, 147"
39
Family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#family","2, 146"
40
cfaff,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank.",http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
41
cfaff,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank.",http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
42
OrigGenus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/first",,http://rs.tdwg.org/dwc/terms/#scientificName,134
43
OrigSpecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/last",Brad: OMIT,http://rs.tdwg.org/dwc/terms/#scientificName,134
44
OrigFamily,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",Brad: OMIT,http://rs.tdwg.org/dwc/terms/#family,146
45
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,Brad: See comment above,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/givenName","23, 01"
46
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick.","http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/surName","23, 02"
47
DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen.; values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
48
coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
49
SourceVoucher,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below.",http://rs.tdwg.org/dwc/terms/#catalogNumber,20
50
PlotID,/location/sourceaccessioncode/_merge/1/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above.","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
51
PlotCode,/location/sourceaccessioncode/_merge/1/_alt/2,"Brad: Same as plotCode, above","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
52
Line,/location/sourceaccessioncode/_merge/2/_alt/2,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
SALVIAS,VegBIEN:,Comments
2
Line,/location/locationevent/authoreventcode,
3
PlotID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
4
PlotCode,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,"Brad: Same as plotCode, above"
5
PlotCode,/location/locationevent/parent_id/locationevent/authoreventcode,"Brad: Same as plotCode, above"
6
PlotID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
7
census_date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_*/date,
8
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."
9
cover_percent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
10
census_no,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue","Brad: Assigned by SALVIAS. 1 for first plot, then 2, 3, etc. I can't recall if we even have repeat censuses in SALVIAS. Probably not."
11
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,"Brad: Incorrect for VegBank This is an aggregate observation. Used in line-intercept methodology only, describes the point along centerline at which an individual intercepts the center line of the plot. Used to determin relative abundance."
12
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
13
Ind,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
14
PlotObsID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
15
DetType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
16
coll_number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string
17
SourceVoucher,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."
18
NoInd,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,"Brad: Incorrect for VegX. This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."
19
canopy_form,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
20
canopy_position,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
21
liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",Brad: Should also be userDefined for VegBank. 
22
temp_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
23
height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob
24
ht_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,Brad: Incorrect for VegBank. This is a measurement applied to a single tree. Check with Bob
25
tag1,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag","Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once.; Quotes sort it before tag2"
26
tag2,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."
27
x_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,"Brad: Correct for VegBank. I'm not so sure for VegX. Let's ask Nick about this. These are important, fundamental values of many tree plots, and should be accommodated within VegX."
28
y_position,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Brad: See comment above for x_position
29
Habit,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=]/value","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait."
30
PlotObsID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
31
Ind,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
32
OrigGenus,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/first,
33
OrigSpecies,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3/_name/last,Brad: OMIT
34
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",
35
auth,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
36
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
37
Species,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
38
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
39
Family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
40
cfaff,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."
41
cfaff,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."
42
OrigGenus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/first",
43
OrigSpecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first/_name/last",Brad: OMIT
44
OrigFamily,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",Brad: OMIT
45
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,Brad: See comment above
46
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
47
DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
48
coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/1",Brad: Incorrect. Map instead as for voucher_string
49
SourceVoucher,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."
50
PlotID,/location/sourceaccessioncode/_merge/1/_alt/1,"Brad: Not sure why this is repeated? This field and plotCode, as the same as above."
51
PlotCode,/location/sourceaccessioncode/_merge/1/_alt/2,"Brad: Same as plotCode, above"
52
Line,/location/sourceaccessioncode/_merge/2/_alt/2,
53 53
GenAuth,,** No input mapping for GenAuth ** 
54 54
IsMorpho,,** No input mapping for IsMorpho ** 
55 55
OrigAuth,,** No input mapping for OrigAuth ** 
mappings/VegCSV-VegBIEN.specimens.csv
1
VegCSV[DwC],VegBIEN:,Comments,Source,Order within table
2
plotArea,/location/area,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
3
verbatimElevation,/location/elevation/_alt/1,,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
4
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
5
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
6
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
7
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
8
landform,/location/landform,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/landform,18
9
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,,http://rs.tdwg.org/dwc/terms/#coordinateUncertaintyInMeters,88
10
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,,http://rs.tdwg.org/dwc/terms/#footprintWKT,91
11
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
12
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
13
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",,http://rs.tdwg.org/dwc/terms/#county,66
14
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",,http://rs.tdwg.org/dwc/terms/#stateProvince,65
15
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",,http://rs.tdwg.org/dwc/terms/#country,63
16
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",,http://rs.tdwg.org/dwc/terms/#continent,59
17
samplingProtocol,/location/locationevent/*_id/method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42
18
projectName,/location/locationevent/*_id/project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1"
19
projectID,/location/locationevent/*_id/project/sourceaccessioncode,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
20
plotName,/location/locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
21
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
22
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0
23
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
24
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
25
parentLocationID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
26
parentPlotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
27
parentPlotName,/location/locationevent/parent_id/locationevent/authoreventcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
28
parentLocationID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
29
precipitation,/location/locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
30
acidity,/location/locationevent/soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
31
baseSaturation,/location/locationevent/soilobs/basesaturation,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
32
calcium,/location/locationevent/soilobs/calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
33
carbon,/location/locationevent/soilobs/carbon,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
34
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap","13, 44"
35
clay,/location/locationevent/soilobs/clay,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
36
conductivity,/location/locationevent/soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
37
magnesium,/location/locationevent/soilobs/magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
38
nitrogen,/location/locationevent/soilobs/nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
39
organic,/location/locationevent/soilobs/organic,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
40
ph,/location/locationevent/soilobs/ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
41
phosphorus,/location/locationevent/soilobs/phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
42
potassium,/location/locationevent/soilobs/potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
43
sand,/location/locationevent/soilobs/sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
44
silt,/location/locationevent/soilobs/silt,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
45
sodium,/location/locationevent/soilobs/sodium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
46
texture,/location/locationevent/soilobs/texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
47
locationID,/location/locationevent/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#locationID,56
48
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value,,http://rs.tdwg.org/dwc/terms/#eventDate,44
49
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,,http://rs.tdwg.org/dwc/terms/#individualCount,25
50
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0
51
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.census_no,3
52
volumeCanopy,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/volumeCanopy,3
53
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
54
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
55
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
56
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
57
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
58
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,http://rs.tdwg.org/dwc/terms/#individualCount,25
59
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.basal_diam,37
60
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,40
61
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,41
62
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#gentry_dbh,7
63
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,42
64
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_notes,8
65
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,36
66
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
67
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
68
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Number removed for clarity; Quotes sort it before tag2,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
69
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
70
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
71
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
72
growthForm,/location/locationevent/taxonoccurrence/growthform,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
73
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
74
recordNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
75
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,,http://rs.tdwg.org/dwc/terms/#scientificName,134
76
computer.taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#taxonRank","2, 151"
77
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship","2, 153"
78
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#infraspecificEpithet","2, 150"
79
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#specificEpithet","2, 149"
80
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#genus","2, 147"
81
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#family","2, 146"
82
identificationQualifier,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last",,http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
83
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,http://rs.tdwg.org/dwc/terms/#infraspecificEpithet,150
84
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,,http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
85
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first",,http://rs.tdwg.org/dwc/terms/#scientificName,134
86
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",,http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,153
87
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://rs.tdwg.org/dwc/terms/#specificEpithet,149
88
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/#genus,147
89
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,http://rs.tdwg.org/dwc/terms/#family,146
90
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,http://rs.tdwg.org/dwc/terms/#order,145
91
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,http://rs.tdwg.org/dwc/terms/#class,144
92
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#phylum,143
93
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#kingdom,142
94
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/givenName","23, 01"
95
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/surName","23, 02"
96
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
97
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
98
temperature,/location/locationevent/temperature,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/observationConditions/temperature,1900
99
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/#maximumDepthInMeters,75
100
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,http://rs.tdwg.org/dwc/terms/#minimumDepthInMeters,74
101
locality,/location/locationnarrative,,http://rs.tdwg.org/dwc/terms/#locality,68
102
plotNotes,/location/notespublic,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54"
103
slopeAspect,/location/slopeaspect/_compass/value,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
104
slopeGradient,/location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
105
parentLocationID,/location/sourceaccessioncode/_merge/1/_alt/1,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
106
parentPlotName,/location/sourceaccessioncode/_merge/1/_alt/2,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
107
locationID,/location/sourceaccessioncode/_merge/2/_alt/1,,http://rs.tdwg.org/dwc/terms/#locationID,56
108
plotName,/location/sourceaccessioncode/_merge/2/_alt/2,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
VegCSV[DwC],VegBIEN:,Comments
2
plotArea,/location/area,
3
verbatimElevation,/location/elevation/_alt/1,
4
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
5
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value",
6
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value",
7
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_rangeEnd/value",
8
landform,/location/landform,
9
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
10
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
11
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
12
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
13
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
14
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
15
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
16
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
17
samplingProtocol,/location/locationevent/*_id/method/name,
18
projectName,/location/locationevent/*_id/project/projectname,
19
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
20
plotName,/location/locationevent/authoreventcode,
21
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
22
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
23
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,
24
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,
25
parentLocationID,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/1,
26
parentPlotName,/location/locationevent/parent_id/locationevent/*_id/location/sourceaccessioncode/_alt/2,
27
parentPlotName,/location/locationevent/parent_id/locationevent/authoreventcode,
28
parentLocationID,/location/locationevent/parent_id/locationevent/sourceaccessioncode,
29
precipitation,/location/locationevent/precipitation,
30
acidity,/location/locationevent/soilobs/acidity,
31
baseSaturation,/location/locationevent/soilobs/basesaturation,
32
calcium,/location/locationevent/soilobs/calcium,
33
carbon,/location/locationevent/soilobs/carbon,
34
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,
35
clay,/location/locationevent/soilobs/clay,
36
conductivity,/location/locationevent/soilobs/conductivity,
37
magnesium,/location/locationevent/soilobs/magnesium,
38
nitrogen,/location/locationevent/soilobs/nitrogen,
39
organic,/location/locationevent/soilobs/organic,
40
ph,/location/locationevent/soilobs/ph,
41
phosphorus,/location/locationevent/soilobs/phosphorus,
42
potassium,/location/locationevent/soilobs/potassium,
43
sand,/location/locationevent/soilobs/sand,
44
silt,/location/locationevent/soilobs/silt,
45
sodium,/location/locationevent/soilobs/sodium,
46
texture,/location/locationevent/soilobs/texture,
47
locationID,/location/locationevent/sourceaccessioncode,
48
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value,
49
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
50
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
51
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
52
volumeCanopy,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,
53
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
54
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
55
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
56
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
57
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
58
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
59
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,
60
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
61
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
62
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
63
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
64
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
65
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
66
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,
67
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,
68
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
69
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
70
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,
71
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,
72
growthForm,/location/locationevent/taxonoccurrence/growthform,
73
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
74
recordNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,
75
scientificName,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,
76
computer.taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",
77
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
78
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
79
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
80
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
81
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]:[iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
82
identificationQualifier,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/last",
83
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
84
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
85
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_name/first",
86
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
87
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
88
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
89
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
90
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
91
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
92
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
93
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
94
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
95
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
96
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
97
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc",
98
temperature,/location/locationevent/temperature,
99
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",
100
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",
101
locality,/location/locationnarrative,
102
plotNotes,/location/notespublic,
103
slopeAspect,/location/slopeaspect/_compass/value,
104
slopeGradient,/location/slopegradient,
105
parentLocationID,/location/sourceaccessioncode/_merge/1/_alt/1,
106
parentPlotName,/location/sourceaccessioncode/_merge/1/_alt/2,
107
locationID,/location/sourceaccessioncode/_merge/2/_alt/1,
108
plotName,/location/sourceaccessioncode/_merge/2/_alt/2,
mappings/for_review/VegCSV-VegBIEN.specimens.csv
1
VegCSV[DwC],VegBIEN:,Comments,Source,Order within table
2
plotArea,//location/area,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/area,11
3
verbatimElevation,//location/elevation,,http://rs.tdwg.org/dwc/terms/#verbatimElevation,70
4
maximumElevationInMeters,//location/elevation,,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
5
minimumElevationInMeters,//location/elevation,,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
6
minimumElevationInMeters,//location/elevationrange,,http://rs.tdwg.org/dwc/terms/#minimumElevationInMeters,71
7
maximumElevationInMeters,//location/elevationrange,,http://rs.tdwg.org/dwc/terms/#maximumElevationInMeters,72
8
landform,//location/landform,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/landform,18
9
coordinateUncertaintyInMeters,//locationdetermination/coordsaccuracy,,http://rs.tdwg.org/dwc/terms/#coordinateUncertaintyInMeters,88
10
footprintWKT,//locationdetermination/footprintgeometry_dwc,,http://rs.tdwg.org/dwc/terms/#footprintWKT,91
11
decimalLatitude,//locationdetermination/latitude,,http://rs.tdwg.org/dwc/terms/#decimalLatitude,85
12
decimalLongitude,//locationdetermination/longitude,,http://rs.tdwg.org/dwc/terms/#decimalLongitude,86
13
county,//locationdetermination/namedplace_id[rank=county]/placename,,http://rs.tdwg.org/dwc/terms/#county,66
14
stateProvince,//locationdetermination/namedplace_id[rank=stateProvince]/placename,,http://rs.tdwg.org/dwc/terms/#stateProvince,65
15
country,//locationdetermination/namedplace_id[rank=country]/placename,,http://rs.tdwg.org/dwc/terms/#country,63
16
continent,//locationdetermination/namedplace_id[rank=continent]/placename,,http://rs.tdwg.org/dwc/terms/#continent,59
17
samplingProtocol,//method/name,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42
18
projectName,//project/projectname,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName",", 1"
19
projectID,//project/sourceaccessioncode,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/projects/project, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
20
plotName,//locationevent/authoreventcode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
21
communityID,//*/commname,Table shortened for standardization,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
22
communityName,//commconcept/commdescription,Table shortened for standardization,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/communityDeterminations/communityDetermination/communityConcepts/communityConcept/name,0
23
plotEventEndDate,//locationevent/obsenddate/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsEndDate",", 44, 6"
24
plotEventStartDate,//locationevent/obsstartdate/_*/date,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot, http://rs.tdwg.org/dwc/terms/#eventDate, http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#obsStartDate",", 44, 5"
25
parentLocationID,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
26
parentPlotName,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
27
parentPlotName,//locationevent/authoreventcode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
28
parentLocationID,//locationevent/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
29
precipitation,//locationevent/precipitation,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13
30
acidity,//soilobs/acidity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_acidity,42
31
baseSaturation,//soilobs/basesaturation,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#baseSaturation,14
32
calcium,//soilobs/calcium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Ca,40
33
carbon,//soilobs/carbon,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_C,37
34
cationExchangeCapacity,//soilobs/cationexchangecapacity,Expanded for clarity,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#exchangeCapacity, http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_cation_cap","13, 44"
35
clay,//soilobs/clay,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilClay,10
36
conductivity,//soilobs/conductivity,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_conductivity,45
37
magnesium,//soilobs/magnesium,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
38
nitrogen,//soilobs/nitrogen,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
39
organic,//soilobs/organic,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilOrganic,6
40
ph,//soilobs/ph,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/ph,6
41
phosphorus,//soilobs/phosphorus,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/phosphorus,2
42
potassium,//soilobs/potassium,Spelling corrected,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/pottasium,3
43
sand,//soilobs/sand,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSand,8
44
silt,//soilobs/silt,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilSilt,9
45
sodium,//soilobs/sodium,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotMetadata&target=tbl_structure.php#soil_Na,41
46
texture,//soilobs/texture,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=soilObs&entity=dba_tabledescription&where=where_tablename#soilTexture,7
47
locationID,//locationevent/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#locationID,56
48
eventDate,//aggregateoccurrence/collectiondate/_*/date,,http://rs.tdwg.org/dwc/terms/#eventDate,44
49
individualCount,//aggregateoccurrence/count,,http://rs.tdwg.org/dwc/terms/#individualCount,25
50
coverPercent,//aggregateoccurrence/cover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/attributes/attribute/ordinal/coverPercent,0
51
censusNumber,"//aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]/definedvalue",Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.census_no,3
52
volumeCanopy,//aggregateoccurrence/linecover,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/volumeCanopy,3
53
fieldNotes,//aggregateoccurrence/notes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
54
recordNumber,//plantobservation/authorplantcode,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
55
occurrenceID,//plantobservation/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
56
voucherType,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond","values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
57
catalogNumber,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
58
individualCount,//plantobservation/stemcount,,http://rs.tdwg.org/dwc/terms/#individualCount,25
59
basalDiameter,//stemobservation/basaldiameter,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.basal_diam,37
60
canopyForm,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,40
61
canopyPosition,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,41
62
diameterBreastHeightGentry,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#gentry_dbh,7
63
lianaInfestation,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,42
64
stemNotes,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_notes,8
65
diameterBreastHeight,//stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,36
66
height,//stemobservation/height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4
67
heightFirstBranch,//stemobservation/heightfirstbranch,,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,33
68
tag,"//stemobservation/stemtag[""""/iscurrent=true]/tag",Number removed for clarity; Quotes sort it before tag2,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9
69
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag:[../stemtag?[iscurrent=true]/iscurrent=false]/tag,Number replaced with named prefix for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8
70
relativePlotX,//stemobservation/xposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801
71
relativePlotY,//stemobservation/yposition,Table added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeY,802
72
growthForm,//taxonoccurrence/growthform,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type,62
73
occurrenceID,//taxonoccurrence/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#occurrenceID,19
74
recordNumber,//taxonoccurrence/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#recordNumber,22
75
scientificName,//taxonoccurrence/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#scientificName,134
76
computer.taxonRank,//plantconcept/plantname_id[rank=subspecies]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#taxonRank","2, 151"
77
computer.scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship","2, 153"
78
computer.infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#infraspecificEpithet","2, 150"
79
computer.specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#specificEpithet","2, 149"
80
computer.genus,//plantconcept/plantname_id[rank=genus]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#genus","2, 147"
81
computer.family,//plantconcept/plantname_id[rank=family]/plantname,,"https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/schemas/vegbien.sql#role.computer, http://rs.tdwg.org/dwc/terms/#family","2, 146"
82
identificationQualifier,//plantconcept/plantname_id[rank=binomial]/plantname,,http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
83
infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,,http://rs.tdwg.org/dwc/terms/#infraspecificEpithet,150
84
identificationQualifier,//taxonoccurrence/taxondetermination[role=identifier]/taxonfit,,http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
85
scientificName,//plantconcept/plantname_id[rank=binomial]/plantname,,http://rs.tdwg.org/dwc/terms/#scientificName,134
86
scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,,http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,153
87
specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,,http://rs.tdwg.org/dwc/terms/#specificEpithet,149
88
genus,//plantconcept/plantname_id[rank=genus]/plantname,,http://rs.tdwg.org/dwc/terms/#genus,147
89
family,//plantconcept/plantname_id[rank=family]/plantname,,http://rs.tdwg.org/dwc/terms/#family,146
90
order,//plantconcept/plantname_id[rank=order]/plantname,,http://rs.tdwg.org/dwc/terms/#order,145
91
class,//plantconcept/plantname_id[rank=class]/plantname,,http://rs.tdwg.org/dwc/terms/#class,144
92
phylum,//plantconcept/plantname_id[rank=subkingdom]/plantname,,http://rs.tdwg.org/dwc/terms/#phylum,143
93
kingdom,//plantconcept/plantname_id[rank=kingdom]/plantname,,http://rs.tdwg.org/dwc/terms/#kingdom,142
94
recordedBy.givenName,//taxonoccurrence/verbatimcollectorname,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/givenName","23, 01"
95
recordedBy.surName,//taxonoccurrence/verbatimcollectorname,,"http://rs.tdwg.org/dwc/terms/#recordedBy, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/parties/party/individualName/surName","23, 02"
96
voucherType,"//*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond","values: direct, indirect",http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.det_type,17
97
catalogNumber,"//*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc",,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
98
temperature,//locationevent/temperature,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/observationConditions/temperature,1900
99
maximumDepthInMeters,//locationevent/waterdepth,,http://rs.tdwg.org/dwc/terms/#maximumDepthInMeters,75
100
minimumDepthInMeters,//locationevent/waterdepth,,http://rs.tdwg.org/dwc/terms/#minimumDepthInMeters,74
101
locality,//location/locationnarrative,,http://rs.tdwg.org/dwc/terms/#locality,68
102
plotNotes,//location/notespublic,Table added for uniqueness,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/note, http://rs.tdwg.org/dwc/terms/#fieldNotes","4, 54"
103
slopeAspect,//location/slopeaspect,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeAspect,15
104
slopeGradient,//location/slopegradient,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/slopeGradient,16
105
parentLocationID,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://rs.tdwg.org/dwc/terms/#locationID","3, 56"
106
parentPlotName,//location/sourceaccessioncode,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName","3, 1"
107
locationID,//location/sourceaccessioncode,,http://rs.tdwg.org/dwc/terms/#locationID,56
108
plotName,//location/sourceaccessioncode,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotName,1
1
VegCSV[DwC],VegBIEN:,Comments
2
plotArea,//location/area,
3
verbatimElevation,//location/elevation,
4
maximumElevationInMeters,//location/elevation,
5
minimumElevationInMeters,//location/elevation,
6
minimumElevationInMeters,//location/elevationrange,
7
maximumElevationInMeters,//location/elevationrange,
8
landform,//location/landform,
9
coordinateUncertaintyInMeters,//locationdetermination/coordsaccuracy,
10
footprintWKT,//locationdetermination/footprintgeometry_dwc,
11
decimalLatitude,//locationdetermination/latitude,
12
decimalLongitude,//locationdetermination/longitude,
13
county,//locationdetermination/namedplace_id[rank=county]/placename,
14
stateProvince,//locationdetermination/namedplace_id[rank=stateProvince]/placename,
15
country,//locationdetermination/namedplace_id[rank=country]/placename,
16
continent,//locationdetermination/namedplace_id[rank=continent]/placename,
17
samplingProtocol,//method/name,
18
projectName,//project/projectname,
19
projectID,//project/sourceaccessioncode,
20
plotName,//locationevent/authoreventcode,
21
communityID,//*/commname,
22
communityName,//commconcept/commdescription,
23
plotEventEndDate,//locationevent/obsenddate/_*/date,
24
plotEventStartDate,//locationevent/obsstartdate/_*/date,
25
parentLocationID,//location/sourceaccessioncode,
26
parentPlotName,//location/sourceaccessioncode,
27
parentPlotName,//locationevent/authoreventcode,
28
parentLocationID,//locationevent/sourceaccessioncode,
29
precipitation,//locationevent/precipitation,
30
acidity,//soilobs/acidity,
31
baseSaturation,//soilobs/basesaturation,
32
calcium,//soilobs/calcium,
33
carbon,//soilobs/carbon,
34
cationExchangeCapacity,//soilobs/cationexchangecapacity,
35
clay,//soilobs/clay,
36
conductivity,//soilobs/conductivity,
37
magnesium,//soilobs/magnesium,
38
nitrogen,//soilobs/nitrogen,
39
organic,//soilobs/organic,
40
ph,//soilobs/ph,
41
phosphorus,//soilobs/phosphorus,
42
potassium,//soilobs/potassium,
43
sand,//soilobs/sand,
44
silt,//soilobs/silt,
45
sodium,//soilobs/sodium,
46
texture,//soilobs/texture,
47
locationID,//locationevent/sourceaccessioncode,
48
eventDate,//aggregateoccurrence/collectiondate/_*/date,
49
individualCount,//aggregateoccurrence/count,
50
coverPercent,//aggregateoccurrence/cover,
51
censusNumber,"//aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]/definedvalue",
52
volumeCanopy,//aggregateoccurrence/linecover,
53
fieldNotes,//aggregateoccurrence/notes,
54
recordNumber,//plantobservation/authorplantcode,
55
occurrenceID,//plantobservation/sourceaccessioncode,
56
voucherType,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/cond",
57
catalogNumber,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
58
individualCount,//plantobservation/stemcount,
59
basalDiameter,//stemobservation/basaldiameter,
60
canopyForm,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]/definedvalue",
61
canopyPosition,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]/definedvalue",
62
diameterBreastHeightGentry,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]/definedvalue",
63
lianaInfestation,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]/definedvalue",
64
stemNotes,"//stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]/definedvalue",
65
diameterBreastHeight,//stemobservation/diameterbreastheight,
66
height,//stemobservation/height,
67
heightFirstBranch,//stemobservation/heightfirstbranch,
68
tag,"//stemobservation/stemtag[""""/iscurrent=true]/tag",Quotes sort it before tag2
69
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag:[../stemtag?[iscurrent=true]/iscurrent=false]/tag,
70
relativePlotX,//stemobservation/xposition,
71
relativePlotY,//stemobservation/yposition,
72
growthForm,//taxonoccurrence/growthform,
73
occurrenceID,//taxonoccurrence/sourceaccessioncode,
74
recordNumber,//taxonoccurrence/sourceaccessioncode,
75
scientificName,//taxonoccurrence/sourceaccessioncode,
76
computer.taxonRank,//plantconcept/plantname_id[rank=subspecies]/plantname,
77
computer.scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,
78
computer.infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,
79
computer.specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,
80
computer.genus,//plantconcept/plantname_id[rank=genus]/plantname,
81
computer.family,//plantconcept/plantname_id[rank=family]/plantname,
82
identificationQualifier,//plantconcept/plantname_id[rank=binomial]/plantname,
83
infraspecificEpithet,//plantconcept/plantname_id[rank=subspecies]/plantname,
84
identificationQualifier,//taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
85
scientificName,//plantconcept/plantname_id[rank=binomial]/plantname,
86
scientificNameAuthorship,//plantconcept/plantname_id[rank=authority]/plantname,
87
specificEpithet,//plantconcept/plantname_id[rank=species]/plantname,
88
genus,//plantconcept/plantname_id[rank=genus]/plantname,
89
family,//plantconcept/plantname_id[rank=family]/plantname,
90
order,//plantconcept/plantname_id[rank=order]/plantname,
91
class,//plantconcept/plantname_id[rank=class]/plantname,
92
phylum,//plantconcept/plantname_id[rank=subkingdom]/plantname,
93
kingdom,//plantconcept/plantname_id[rank=kingdom]/plantname,
94
recordedBy.givenName,//taxonoccurrence/verbatimcollectorname,
95
recordedBy.surName,//taxonoccurrence/verbatimcollectorname,
96
voucherType,"//*_id/specimenreplicate/_if[@name=""if indirect voucher""]/cond",
97
catalogNumber,"//*_id/specimenreplicate/_if[@name=""if indirect voucher""]/then/catalognumber_dwc",
98
temperature,//locationevent/temperature,
99
maximumDepthInMeters,//locationevent/waterdepth,
100
minimumDepthInMeters,//locationevent/waterdepth,
101
locality,//location/locationnarrative,
102
plotNotes,//location/notespublic,
103
slopeAspect,//location/slopeaspect,
104
slopeGradient,//location/slopegradient,
105
parentLocationID,//location/sourceaccessioncode,
106
parentPlotName,//location/sourceaccessioncode,
107
locationID,//location/sourceaccessioncode,
108
plotName,//location/sourceaccessioncode,

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