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Revision 3975

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/DwC2-VegBIEN.specimens.csv: Mapped identificationQualifier. This will enable merging with VegCSV.

View differences:

inputs/U/test/import.specimens.xml.ref
121 121 
                            </date>
122 122 
                        </_date>
123 123 
                    </determinationdate>
124 
                    <taxonfit>$cf</taxonfit>
124 125 
                    <iscurrent>true</iscurrent>
125 126 
                    <party_id>
126 127 
                        <party>
inputs/U/maps/VegBIEN.specimens.csv
10 10 
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
11 11 
ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
12 12 
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
13 
cf,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
13 14 
Detby,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
14 15 
Detby,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
15 16 
Detby,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,
......
33 34 
Phenology,,** No non-empty join mapping for ReproductiveCondition **
34 35 
Prefix,,Not used
35 36 
Suffix,,Not used
36 
cf,,** No non-empty join mapping for IdentificationQualifier **
inputs/ARIZ/test/import.specimens.xml.ref
249 249 
                        </_date>
250 250 
                    </determinationdate>
251 251 
                    <notes>$Remarks</notes>
252 
                    <taxonfit>$IdentificationModifier</taxonfit>
252 253 
                    <iscurrent>true</iscurrent>
253 254 
                    <party_id>
254 255 
                        <party>
inputs/ARIZ/maps/VegBIEN.specimens.csv
30 30 
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
31 31 
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
32 32 
Remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
33 
IdentificationModifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
33 34 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
34 35 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
35 36 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,
......
59 60 
GeorefMethod,,** No non-empty join mapping for georeferenceProtocol **
60 61 
HigherGeography,,** No non-empty join mapping for HigherGeography **
61 62 
HorizontalDatum,,Not used
62 
IdentificationModifier,,** No non-empty join mapping for identificationQualifier **
63 63 
IndividualCount,,** No non-empty join mapping for IndividualCount **
64 64 
Island,,** No non-empty join mapping for Island **
65 65 
IslandGroup,,** No non-empty join mapping for IslandGroup **
inputs/QMOR/test/import.specimens.xml.ref
173 173 
                <taxondetermination>
174 174 
                    <role>identifier</role>
175 175 
                    <determinationdate><_date><date><_dateRangeStart><value><_alt><2>$dateIdentified</2></_alt></value></_dateRangeStart></date></_date></determinationdate>
176 
                    <taxonfit>$identificationQualifier</taxonfit>
176 177 
                    <iscurrent>true</iscurrent>
177 178 
                    <party_id>
178 179 
                        <party>
inputs/QMOR/maps/VegBIEN.specimens.csv
22 22 
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
23 23 
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
24 24 
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
25 
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
25 26 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
26 27 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
27 28 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,
......
56 57 
georeferenceSources,,** No non-empty join mapping for georeferenceSources **
57 58 
georeferencedBy,,** No non-empty join mapping for georeferencedBy **
58 59 
georeferencedDate,,** No non-empty join mapping for georeferencedDate **
59 
identificationQualifier,,** No non-empty join mapping for identificationQualifier **
60 60 
identificationRemarks,,** No non-empty join mapping for identificationRemarks **
61 61 
individualCount,,** No non-empty join mapping for individualCount **
62 62 
institutionID,,** No non-empty join mapping for institutionID **
mappings/DwC2-VegBIEN.specimens.csv
29 29 
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
30 30 
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,
31 31 
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
32 
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
32 33 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
33 34 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
34 35 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,
......
103 104 
higherGeographyID,,
104 105 
highestBiostratigraphicZone,,
105 106 
identificationID,,
106 
identificationQualifier,,
107 107 
identificationReferences,,
108 108 
identificationRemarks,,
109 109 
identificationVerificationStatus,,
mappings/for_review/DwC2-VegBIEN.specimens.csv
29 29 
establishmentMeans,//taxonoccurrence/isnative,
30 30 
dateIdentified,//taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date,
31 31 
taxonRemarks,//taxonoccurrence/taxondetermination[role=identifier]/notes,
32 
identificationQualifier,//taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
32 33 
identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/givenname,
33 34 
identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/middlename,
34 35 
identifiedBy,//taxonoccurrence/taxondetermination[role=identifier]/*_id/party/surname,
......
103 104 
higherGeographyID,,
104 105 
highestBiostratigraphicZone,,
105 106 
identificationID,,
106 
identificationQualifier,,
107 107 
identificationReferences,,
108 108 
identificationRemarks,,
109 109 
identificationVerificationStatus,,
mappings/DwC-VegBIEN.specimens.csv
109 109 
TaxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
110 110 
remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
111 111 
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
112 
IdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
113 
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
112 114 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
113 115 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
114 116 
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
......
225 227 
HigherGeographyID,,** No non-empty join mapping for higherGeographyID **
226 228 
HighestBiostratigraphicZone,,** No non-empty join mapping for highestBiostratigraphicZone **
227 229 
IdentificationID,,** No non-empty join mapping for identificationID **
228 
IdentificationQualifier,,** No non-empty join mapping for identificationQualifier **
229 230 
IdentificationReferences,,** No non-empty join mapping for identificationReferences **
230 231 
IdentificationRemarks,,** No non-empty join mapping for identificationRemarks **
231 232 
IdentificationVerificationStatus,,** No non-empty join mapping for identificationVerificationStatus **
......
373 374 
higherGeographyID,,
374 375 
highestBiostratigraphicZone,,
375 376 
identificationID,,
376 
identificationQualifier,,
377 377 
identificationReferences,,
378 378 
identificationRemarks,,
379 379 
identificationVerificationStatus,,
mappings/DwC.cs-VegBIEN.specimens.csv
54 54 
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,
55 55 
remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
56 56 
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
57 
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
57 58 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,
58 59 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,
59 60 
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,
......
139 140 
higherGeographyID,,
140 141 
highestBiostratigraphicZone,,
141 142 
identificationID,,
142 
identificationQualifier,,
143 143 
identificationReferences,,
144 144 
identificationRemarks,,
145 145 
identificationVerificationStatus,,

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