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1 3970 aaronmk
DwC,VegBIEN:,Comments
2 3984 aaronmk
maximumElevation,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
3
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
4 3970 aaronmk
minimumElevation,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
5 3969 aaronmk
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
6 3970 aaronmk
minimumElevation,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
7 3969 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
8 3984 aaronmk
maximumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
9
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
10 3970 aaronmk
minimumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
11 3969 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
12
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
13
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
14 3970 aaronmk
boundingBox,/location/locationdetermination/footprintgeometry_dwc,
15 3969 aaronmk
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
16
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
17 3970 aaronmk
latitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
18 3969 aaronmk
verbatimLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
19
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
20 3970 aaronmk
longitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
21 3969 aaronmk
verbatimLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
22
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
23 3970 aaronmk
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
24 3969 aaronmk
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
25
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
26
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
27 3970 aaronmk
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
28 3973 aaronmk
fieldNumber,/location/locationevent/authoreventcode,
29 3970 aaronmk
eventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping
30
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
31
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
32
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
33
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,
34
collectedDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/3,
35 3982 aaronmk
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
37 3970 aaronmk
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
38 3969 aaronmk
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
39
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
40
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
41
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
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collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
43
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
44 3969 aaronmk
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
45 3970 aaronmk
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
46
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
47 3969 aaronmk
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
48
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
49
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
50 3980 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
51
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
52
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
53
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
54
scientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
55
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
56
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
57
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
58
species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
59
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
60
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
61
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
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order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
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class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
64
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
65
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
66
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
67
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
68
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
69
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
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dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
71
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,
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remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
73
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
74
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
75 3970 aaronmk
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
77 3984 aaronmk
maximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
78
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
79
minimumDepth,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
80
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
81 3969 aaronmk
locality,/location/locationnarrative/_merge/1,
82
verbatimLocality,/location/locationnarrative/_merge/2,
83
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
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globalUniqueIdentifier,/location/sourceaccessioncode/_alt/1,
85
id,/location/sourceaccessioncode/_alt/1,
86 3969 aaronmk
occurrenceID,/location/sourceaccessioncode/_alt/1,
87
institutionCode,/location/sourceaccessioncode/_alt/2/_merge/1,
88
collectionCode,/location/sourceaccessioncode/_alt/2/_merge/2,
89
catalogNumber,/location/sourceaccessioncode/_alt/2/_merge/3,
90
acceptedNameUsage,,
91
acceptedNameUsageID,,
92 3970 aaronmk
accessRights,,** No non-empty join mapping for dcterms:accessRights **
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associatedMedia,,
94
associatedOccurrences,,
95
associatedReferences,,
96
associatedSequences,,
97
associatedTaxa,,
98
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
99
bed,,
100
behavior,,
101 3970 aaronmk
bibliographicCitation,,** No non-empty join mapping for dcterms:bibliographicCitation **
102 3969 aaronmk
countryCode,,
103
dataGeneralizations,,
104
datasetID,,
105
datasetName,,
106 3970 aaronmk
dateLastModified,,** No non-empty join mapping for dcterms:modified **
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day,,Brad: OMIT
108
dcterms:accessRights,,
109
dcterms:bibliographicCitation,,
110
dcterms:language,,
111
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
112
dcterms:references,,
113
dcterms:rights,,
114
dcterms:rightsHolder,,
115
dcterms:type,,
116
disposition,,
117
dynamicProperties,,
118
earliestAgeOrLowestStage,,
119
earliestEonOrLowestEonothem,,
120
earliestEpochOrLowestSeries,,
121
earliestEraOrLowestErathem,,
122
earliestPeriodOrLowestSystem,,
123
endDayOfYear,,
124
eventID,,
125
eventRemarks,,
126
eventTime,,Brad: OMIT
127
footprintSRS,,
128
footprintSpatialFit,,
129
formation,,
130
geodeticDatum,,
131
geologicalContextID,,
132
georeferenceProtocol,,
133
georeferenceRemarks,,
134
georeferenceSources,,
135
georeferenceVerificationStatus,,
136
georeferencedBy,,
137
georeferencedDate,,
138
group,,
139
higherClassification,,
140
higherGeography,,
141
higherGeographyID,,
142
highestBiostratigraphicZone,,
143
identificationID,,
144
identificationReferences,,
145
identificationRemarks,,
146
identificationVerificationStatus,,
147
individualID,,
148
informationWithheld,,
149
institutionID,,
150
island,,
151
islandGroup,,
152 3970 aaronmk
julianDay,,** No non-empty join mapping for day **
153
language,,** No non-empty join mapping for dcterms:language **
154 3969 aaronmk
latestAgeOrHighestStage,,
155
latestEonOrHighestEonothem,,
156
latestEpochOrHighestSeries,,
157
latestEraOrHighestErathem,,
158
latestPeriodOrHighestSystem,,
159
lifeStage,,
160
lithostratigraphicTerms,,
161
locationAccordingTo,,
162
locationID,,
163
locationRemarks,,
164
lowestBiostratigraphicZone,,
165
maximumDistanceAboveSurfaceInMeters,,
166
measurementAccuracy,,
167
measurementDeterminedBy,,
168
measurementDeterminedDate,,
169
measurementID,,
170
measurementMethod,,
171
measurementRemarks,,
172
measurementType,,
173
measurementUnit,,
174
measurementValue,,
175
member,,
176
minimumDistanceAboveSurfaceInMeters,,
177 3970 aaronmk
modified,,** No non-empty join mapping for dcterms:modified **
178 3969 aaronmk
month,,
179
municipality,,
180
nameAccordingTo,,
181
nameAccordingToID,,
182
namePublishedIn,,
183
namePublishedInID,,
184
namePublishedInYear,,
185
nomenclaturalCode,,
186
nomenclaturalStatus,,
187
occurrenceRemarks,,
188
occurrenceStatus,,
189
originalNameUsage,,
190
originalNameUsageID,,
191
otherCatalogNumbers,,
192
ownerInstitutionCode,,
193
parentNameUsage,,
194
parentNameUsageID,,
195
pointRadiusSpatialFit,,
196 3970 aaronmk
preparation,,** No non-empty join mapping for preparations **
197
preparationType,,** No non-empty join mapping for preparations **
198 3969 aaronmk
preparations,,Brad: OMIT
199 3970 aaronmk
previousCatalogNumber,,** No non-empty join mapping for otherCatalogNumbers ** According to <http://rs.tdwg.org/dwc/terms/history/index.htm#PreviousCatalogNumber-2003-06-13>
200 3969 aaronmk
previousIdentifications,,Brad: OMIT
201 3970 aaronmk
references,,** No non-empty join mapping for dcterms:references **
202
relatedCatalogItem,,** No non-empty join mapping for relatedResourceID **
203 3969 aaronmk
relatedResourceID,,Brad: OMIT
204
relationshipAccordingTo,,
205
relationshipEstablishedDate,,
206
relationshipOfResource,,Brad: OMIT
207
relationshipRemarks,,
208 3970 aaronmk
relationshipType,,** No non-empty join mapping for relationshipOfResource **
209 3969 aaronmk
reproductiveCondition,,
210
resourceID,,
211
resourceRelationshipID,,
212 3970 aaronmk
rights,,** No non-empty join mapping for dcterms:rights **
213
rightsHolder,,** No non-empty join mapping for dcterms:rightsHolder **
214 3969 aaronmk
samplingEffort,,
215
samplingProtocol,,
216
scientificNameID,,
217
startDayOfYear,,
218
subgenus,,
219
taxonConceptID,,
220
taxonID,,
221
taxonRank,,
222
taxonomicStatus,,
223 3970 aaronmk
timeOfDay,,** No non-empty join mapping for eventTime **
224
type,,** No non-empty join mapping for dcterms:type **
225 3969 aaronmk
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
226
verbatimCoordinateSystem,,
227
verbatimCoordinates,,
228
verbatimDepth,,
229
verbatimElevation,,
230
verbatimEventDate,,
231
verbatimSRS,,
232
verbatimTaxonRank,,
233
vernacularName,,
234
waterBody,,
235
year,,