Project

General

Profile

1
DwC,VegBIEN:,Comments
2
institutionCode,/location/authorlocationcode/_merge/1,
3
collectionCode,/location/authorlocationcode/_merge/2,
4
catalogNumber,/location/authorlocationcode/_merge/3,
5
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
6
maximumElevation,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
7
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
8
minimumElevation,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
9
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
10
minimumElevation,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
11
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
12
maximumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
13
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
14
minimumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
15
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
16
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
17
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
18
boundingBox,/location/locationdetermination/footprintgeometry_dwc,
19
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
20
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
21
latitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
22
verbatimLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
23
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
24
longitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
25
verbatimLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
26
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
27
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
28
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
29
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
30
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
31
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
32
samplingProtocol,/location/locationevent/*_id/method/name,
33
fieldNumber,/location/locationevent/authoreventcode,
34
eventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping
35
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
36
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
37
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
38
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,
39
collectedDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/3,
40
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
41
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
42
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
43
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
44
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
45
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
46
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
47
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
48
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
49
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
50
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
51
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
52
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
53
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
54
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
55
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
56
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
57
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
58
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
59
scientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
60
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
61
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
62
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
63
species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
64
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
65
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
66
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
67
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
68
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
69
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
70
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
71
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
72
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
73
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
74
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
75
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
76
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,
77
remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
78
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
79
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
80
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
81
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
82
maximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
83
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
84
minimumDepth,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
85
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
86
locality,/location/locationnarrative/_merge/1,
87
verbatimLocality,/location/locationnarrative/_merge/2,
88
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
89
globalUniqueIdentifier,/location/sourceaccessioncode/_alt/1,
90
id,/location/sourceaccessioncode/_alt/1,
91
occurrenceID,/location/sourceaccessioncode/_alt/1,
92
locationID,/location/sourceaccessioncode/_alt/2,
93
acceptedNameUsage,,
94
acceptedNameUsageID,,
95
accessRights,,** No non-empty join mapping for dcterms:accessRights ** 
96
associatedMedia,,
97
associatedOccurrences,,
98
associatedReferences,,
99
associatedSequences,,
100
associatedTaxa,,
101
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
102
bed,,
103
behavior,,
104
bibliographicCitation,,** No non-empty join mapping for dcterms:bibliographicCitation ** 
105
countryCode,,
106
dataGeneralizations,,
107
datasetID,,
108
datasetName,,
109
dateLastModified,,** No non-empty join mapping for dcterms:modified ** 
110
day,,Brad: OMIT
111
dcterms:accessRights,,
112
dcterms:bibliographicCitation,,
113
dcterms:language,,
114
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
115
dcterms:references,,
116
dcterms:rights,,
117
dcterms:rightsHolder,,
118
dcterms:type,,
119
disposition,,
120
dynamicProperties,,
121
earliestAgeOrLowestStage,,
122
earliestEonOrLowestEonothem,,
123
earliestEpochOrLowestSeries,,
124
earliestEraOrLowestErathem,,
125
earliestPeriodOrLowestSystem,,
126
endDayOfYear,,
127
eventID,,
128
eventRemarks,,
129
eventTime,,Brad: OMIT
130
footprintSRS,,
131
footprintSpatialFit,,
132
formation,,
133
geodeticDatum,,
134
geologicalContextID,,
135
georeferenceProtocol,,
136
georeferenceRemarks,,
137
georeferenceSources,,
138
georeferenceVerificationStatus,,
139
georeferencedBy,,
140
georeferencedDate,,
141
group,,
142
higherClassification,,
143
higherGeography,,
144
higherGeographyID,,
145
highestBiostratigraphicZone,,
146
identificationID,,
147
identificationReferences,,
148
identificationRemarks,,
149
identificationVerificationStatus,,
150
individualID,,
151
informationWithheld,,
152
institutionID,,
153
island,,
154
islandGroup,,
155
julianDay,,** No non-empty join mapping for day ** 
156
language,,** No non-empty join mapping for dcterms:language ** 
157
latestAgeOrHighestStage,,
158
latestEonOrHighestEonothem,,
159
latestEpochOrHighestSeries,,
160
latestEraOrHighestErathem,,
161
latestPeriodOrHighestSystem,,
162
lifeStage,,
163
lithostratigraphicTerms,,
164
locationAccordingTo,,
165
locationRemarks,,
166
lowestBiostratigraphicZone,,
167
maximumDistanceAboveSurfaceInMeters,,
168
measurementAccuracy,,
169
measurementDeterminedBy,,
170
measurementDeterminedDate,,
171
measurementID,,
172
measurementMethod,,
173
measurementRemarks,,
174
measurementType,,
175
measurementUnit,,
176
measurementValue,,
177
member,,
178
minimumDistanceAboveSurfaceInMeters,,
179
modified,,** No non-empty join mapping for dcterms:modified ** 
180
month,,
181
municipality,,
182
nameAccordingTo,,
183
nameAccordingToID,,
184
namePublishedIn,,
185
namePublishedInID,,
186
namePublishedInYear,,
187
nomenclaturalCode,,
188
nomenclaturalStatus,,
189
occurrenceRemarks,,
190
occurrenceStatus,,
191
originalNameUsage,,
192
originalNameUsageID,,
193
otherCatalogNumbers,,
194
ownerInstitutionCode,,
195
parentNameUsage,,
196
parentNameUsageID,,
197
pointRadiusSpatialFit,,
198
preparation,,** No non-empty join mapping for preparations ** 
199
preparationType,,** No non-empty join mapping for preparations ** 
200
preparations,,Brad: OMIT
201
previousCatalogNumber,,** No non-empty join mapping for otherCatalogNumbers ** According to <http://rs.tdwg.org/dwc/terms/history/index.htm#PreviousCatalogNumber-2003-06-13>
202
previousIdentifications,,Brad: OMIT
203
references,,** No non-empty join mapping for dcterms:references ** 
204
relatedCatalogItem,,** No non-empty join mapping for relatedResourceID ** 
205
relatedResourceID,,Brad: OMIT
206
relationshipAccordingTo,,
207
relationshipEstablishedDate,,
208
relationshipOfResource,,Brad: OMIT
209
relationshipRemarks,,
210
relationshipType,,** No non-empty join mapping for relationshipOfResource ** 
211
reproductiveCondition,,
212
resourceID,,
213
resourceRelationshipID,,
214
rights,,** No non-empty join mapping for dcterms:rights ** 
215
rightsHolder,,** No non-empty join mapping for dcterms:rightsHolder ** 
216
samplingEffort,,
217
scientificNameID,,
218
startDayOfYear,,
219
subgenus,,
220
taxonConceptID,,
221
taxonID,,
222
taxonRank,,
223
taxonomicStatus,,
224
timeOfDay,,** No non-empty join mapping for eventTime ** 
225
type,,** No non-empty join mapping for dcterms:type ** 
226
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
227
verbatimCoordinateSystem,,
228
verbatimCoordinates,,
229
verbatimDepth,,
230
verbatimEventDate,,
231
verbatimSRS,,
232
verbatimTaxonRank,,
233
vernacularName,,
234
waterBody,,
235
year,,
(7-7/24)