| 1 |
3969
|
aaronmk
|
DwC,VegBIEN:,Comments
|
| 2 |
4003
|
aaronmk
|
institutionCode,/location/authorlocationcode/_merge/1,
|
| 3 |
|
|
collectionCode,/location/authorlocationcode/_merge/2,
|
| 4 |
|
|
catalogNumber,/location/authorlocationcode/_merge/3,
|
| 5 |
3996
|
aaronmk
|
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
|
| 6 |
3984
|
aaronmk
|
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
| 7 |
3969
|
aaronmk
|
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
| 8 |
|
|
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
| 9 |
3984
|
aaronmk
|
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
| 10 |
3969
|
aaronmk
|
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
| 11 |
|
|
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
|
| 12 |
|
|
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
|
| 13 |
|
|
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
|
| 14 |
|
|
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
|
| 15 |
4013
|
aaronmk
|
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
|
| 16 |
3969
|
aaronmk
|
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
|
| 17 |
4013
|
aaronmk
|
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
|
| 18 |
3969
|
aaronmk
|
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
| 19 |
|
|
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
| 20 |
|
|
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
| 21 |
|
|
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
| 22 |
3996
|
aaronmk
|
samplingProtocol,/location/locationevent/*_id/method/name,
|
| 23 |
3973
|
aaronmk
|
fieldNumber,/location/locationevent/authoreventcode,
|
| 24 |
3969
|
aaronmk
|
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value,
|
| 25 |
3982
|
aaronmk
|
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
|
| 26 |
3969
|
aaronmk
|
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
|
| 27 |
4007
|
aaronmk
|
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
|
| 28 |
3969
|
aaronmk
|
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
|
| 29 |
4006
|
aaronmk
|
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
|
| 30 |
3969
|
aaronmk
|
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
|
| 31 |
|
|
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
|
| 32 |
|
|
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
|
| 33 |
3973
|
aaronmk
|
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber,
|
| 34 |
3969
|
aaronmk
|
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
|
| 35 |
|
|
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
| 36 |
|
|
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
|
| 37 |
|
|
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
|
| 38 |
4006
|
aaronmk
|
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
|
| 39 |
4007
|
aaronmk
|
recordNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,
|
| 40 |
3980
|
aaronmk
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
|
| 41 |
|
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
|
| 42 |
|
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
|
| 43 |
|
|
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
|
| 44 |
|
|
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
|
| 45 |
|
|
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
|
| 46 |
|
|
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
|
| 47 |
|
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
|
| 48 |
|
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
|
| 49 |
|
|
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
|
| 50 |
|
|
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
|
| 51 |
|
|
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
|
| 52 |
|
|
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
|
| 53 |
|
|
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value,
|
| 54 |
|
|
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
|
| 55 |
|
|
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
|
| 56 |
3969
|
aaronmk
|
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
|
| 57 |
3984
|
aaronmk
|
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
| 58 |
|
|
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
| 59 |
3969
|
aaronmk
|
locality,/location/locationnarrative/_merge/1,
|
| 60 |
|
|
verbatimLocality,/location/locationnarrative/_merge/2,
|
| 61 |
|
|
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
|
| 62 |
4005
|
aaronmk
|
occurrenceID,/location/sourceaccessioncode/_alt/1,
|
| 63 |
|
|
locationID,/location/sourceaccessioncode/_alt/2,
|
| 64 |
3969
|
aaronmk
|
acceptedNameUsage,,
|
| 65 |
|
|
acceptedNameUsageID,,
|
| 66 |
|
|
associatedMedia,,
|
| 67 |
|
|
associatedOccurrences,,
|
| 68 |
|
|
associatedReferences,,
|
| 69 |
|
|
associatedSequences,,
|
| 70 |
|
|
associatedTaxa,,
|
| 71 |
|
|
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
|
| 72 |
|
|
bed,,
|
| 73 |
|
|
behavior,,
|
| 74 |
|
|
countryCode,,
|
| 75 |
|
|
dataGeneralizations,,
|
| 76 |
|
|
datasetID,,
|
| 77 |
|
|
datasetName,,
|
| 78 |
|
|
day,,Brad: OMIT
|
| 79 |
|
|
dcterms:accessRights,,
|
| 80 |
|
|
dcterms:bibliographicCitation,,
|
| 81 |
|
|
dcterms:language,,
|
| 82 |
|
|
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
|
| 83 |
|
|
dcterms:references,,
|
| 84 |
|
|
dcterms:rights,,
|
| 85 |
|
|
dcterms:rightsHolder,,
|
| 86 |
|
|
dcterms:type,,
|
| 87 |
|
|
disposition,,
|
| 88 |
|
|
dynamicProperties,,
|
| 89 |
|
|
earliestAgeOrLowestStage,,
|
| 90 |
|
|
earliestEonOrLowestEonothem,,
|
| 91 |
|
|
earliestEpochOrLowestSeries,,
|
| 92 |
|
|
earliestEraOrLowestErathem,,
|
| 93 |
|
|
earliestPeriodOrLowestSystem,,
|
| 94 |
|
|
endDayOfYear,,
|
| 95 |
|
|
eventID,,
|
| 96 |
|
|
eventRemarks,,
|
| 97 |
|
|
eventTime,,Brad: OMIT
|
| 98 |
|
|
footprintSRS,,
|
| 99 |
|
|
footprintSpatialFit,,
|
| 100 |
|
|
formation,,
|
| 101 |
|
|
geodeticDatum,,
|
| 102 |
|
|
geologicalContextID,,
|
| 103 |
|
|
georeferenceProtocol,,
|
| 104 |
|
|
georeferenceRemarks,,
|
| 105 |
|
|
georeferenceSources,,
|
| 106 |
|
|
georeferenceVerificationStatus,,
|
| 107 |
|
|
georeferencedBy,,
|
| 108 |
|
|
georeferencedDate,,
|
| 109 |
|
|
group,,
|
| 110 |
|
|
higherClassification,,
|
| 111 |
|
|
higherGeography,,
|
| 112 |
|
|
higherGeographyID,,
|
| 113 |
|
|
highestBiostratigraphicZone,,
|
| 114 |
|
|
identificationID,,
|
| 115 |
|
|
identificationReferences,,
|
| 116 |
|
|
identificationRemarks,,
|
| 117 |
|
|
identificationVerificationStatus,,
|
| 118 |
|
|
individualID,,
|
| 119 |
|
|
informationWithheld,,
|
| 120 |
|
|
institutionID,,
|
| 121 |
|
|
island,,
|
| 122 |
|
|
islandGroup,,
|
| 123 |
|
|
latestAgeOrHighestStage,,
|
| 124 |
|
|
latestEonOrHighestEonothem,,
|
| 125 |
|
|
latestEpochOrHighestSeries,,
|
| 126 |
|
|
latestEraOrHighestErathem,,
|
| 127 |
|
|
latestPeriodOrHighestSystem,,
|
| 128 |
|
|
lifeStage,,
|
| 129 |
|
|
lithostratigraphicTerms,,
|
| 130 |
|
|
locationAccordingTo,,
|
| 131 |
|
|
locationRemarks,,
|
| 132 |
|
|
lowestBiostratigraphicZone,,
|
| 133 |
|
|
maximumDistanceAboveSurfaceInMeters,,
|
| 134 |
|
|
measurementAccuracy,,
|
| 135 |
|
|
measurementDeterminedBy,,
|
| 136 |
|
|
measurementDeterminedDate,,
|
| 137 |
|
|
measurementID,,
|
| 138 |
|
|
measurementMethod,,
|
| 139 |
|
|
measurementRemarks,,
|
| 140 |
|
|
measurementType,,
|
| 141 |
|
|
measurementUnit,,
|
| 142 |
|
|
measurementValue,,
|
| 143 |
|
|
member,,
|
| 144 |
|
|
minimumDistanceAboveSurfaceInMeters,,
|
| 145 |
|
|
month,,
|
| 146 |
|
|
municipality,,
|
| 147 |
|
|
nameAccordingTo,,
|
| 148 |
|
|
nameAccordingToID,,
|
| 149 |
|
|
namePublishedIn,,
|
| 150 |
|
|
namePublishedInID,,
|
| 151 |
|
|
namePublishedInYear,,
|
| 152 |
|
|
nomenclaturalCode,,
|
| 153 |
|
|
nomenclaturalStatus,,
|
| 154 |
|
|
occurrenceRemarks,,
|
| 155 |
|
|
occurrenceStatus,,
|
| 156 |
|
|
originalNameUsage,,
|
| 157 |
|
|
originalNameUsageID,,
|
| 158 |
|
|
otherCatalogNumbers,,
|
| 159 |
|
|
ownerInstitutionCode,,
|
| 160 |
|
|
parentNameUsage,,
|
| 161 |
|
|
parentNameUsageID,,
|
| 162 |
|
|
pointRadiusSpatialFit,,
|
| 163 |
|
|
preparations,,Brad: OMIT
|
| 164 |
|
|
previousIdentifications,,Brad: OMIT
|
| 165 |
|
|
relatedResourceID,,Brad: OMIT
|
| 166 |
|
|
relationshipAccordingTo,,
|
| 167 |
|
|
relationshipEstablishedDate,,
|
| 168 |
|
|
relationshipOfResource,,Brad: OMIT
|
| 169 |
|
|
relationshipRemarks,,
|
| 170 |
|
|
reproductiveCondition,,
|
| 171 |
|
|
resourceID,,
|
| 172 |
|
|
resourceRelationshipID,,
|
| 173 |
|
|
samplingEffort,,
|
| 174 |
|
|
scientificNameID,,
|
| 175 |
|
|
startDayOfYear,,
|
| 176 |
|
|
subgenus,,
|
| 177 |
|
|
taxonConceptID,,
|
| 178 |
|
|
taxonID,,
|
| 179 |
|
|
taxonRank,,
|
| 180 |
|
|
taxonomicStatus,,
|
| 181 |
|
|
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
|
| 182 |
|
|
verbatimCoordinateSystem,,
|
| 183 |
|
|
verbatimCoordinates,,
|
| 184 |
|
|
verbatimDepth,,
|
| 185 |
|
|
verbatimEventDate,,
|
| 186 |
|
|
verbatimSRS,,
|
| 187 |
|
|
verbatimTaxonRank,,
|
| 188 |
|
|
vernacularName,,
|
| 189 |
|
|
waterBody,,
|
| 190 |
|
|
year,,
|
