Revision 4021
Added by Aaron Marcuse-Kubitza over 12 years ago
| mappings/for_review/DwC2-VegBIEN.specimens.csv | ||
|---|---|---|
| 21 | 21 |
continent,//locationdetermination/namedplace_id[rank=continent]/placename, |
| 22 | 22 |
samplingProtocol,//method/name, |
| 23 | 23 |
fieldNumber,//locationevent/authoreventcode, |
| 24 |
eventDate,//locationevent/obsenddate/_*/date, |
|
| 25 |
eventDate,//locationevent/obsstartdate/_*/date, |
|
| 24 | 26 |
eventDate,//aggregateoccurrence/collectiondate/_*/date, |
| 25 | 27 |
individualCount,//aggregateoccurrence/count, |
| 26 | 28 |
fieldNotes,//aggregateoccurrence/notes, |
| mappings/DwC.cs-VegBIEN.specimens.csv | ||
|---|---|---|
| 31 | 31 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 32 | 32 |
samplingProtocol,/location/locationevent/*_id/method/name, |
| 33 | 33 |
fieldNumber,/location/locationevent/authoreventcode, |
| 34 |
eventDate/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 35 |
dayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 36 |
monthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 37 |
yearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 38 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 39 |
collectedDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3, |
|
| 40 |
eventDate/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 41 |
dayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 42 |
monthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 43 |
yearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 44 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 45 |
collectedDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3, |
|
| 34 | 46 |
eventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
| 35 | 47 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 36 | 48 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| inputs/XAL/test/import.specimens.xml.ref | ||
|---|---|---|
| 151 | 151 |
</locationdetermination> |
| 152 | 152 |
<locationevent> |
| 153 | 153 |
<authoreventcode>$FieldNumber</authoreventcode> |
| 154 |
<obsenddate> |
|
| 155 |
<_date> |
|
| 156 |
<date> |
|
| 157 |
<_dateRangeEnd> |
|
| 158 |
<value> |
|
| 159 |
<_alt> |
|
| 160 |
<1> |
|
| 161 |
<_date> |
|
| 162 |
<day> |
|
| 163 |
<_nullIf> |
|
| 164 |
<null>0</null> |
|
| 165 |
<type>float</type> |
|
| 166 |
<value>$DayCollected</value> |
|
| 167 |
</_nullIf> |
|
| 168 |
</day> |
|
| 169 |
<month> |
|
| 170 |
<_nullIf> |
|
| 171 |
<null>0</null> |
|
| 172 |
<type>float</type> |
|
| 173 |
<value>$MonthCollected</value> |
|
| 174 |
</_nullIf> |
|
| 175 |
</month> |
|
| 176 |
<year> |
|
| 177 |
<_nullIf> |
|
| 178 |
<null>0</null> |
|
| 179 |
<type>float</type> |
|
| 180 |
<value>$YearCollected</value> |
|
| 181 |
</_nullIf> |
|
| 182 |
</year> |
|
| 183 |
</_date> |
|
| 184 |
</1> |
|
| 185 |
</_alt> |
|
| 186 |
</value> |
|
| 187 |
</_dateRangeEnd> |
|
| 188 |
</date> |
|
| 189 |
</_date> |
|
| 190 |
</obsenddate> |
|
| 191 |
<obsstartdate> |
|
| 192 |
<_date> |
|
| 193 |
<date> |
|
| 194 |
<_dateRangeStart> |
|
| 195 |
<value> |
|
| 196 |
<_alt> |
|
| 197 |
<1> |
|
| 198 |
<_date> |
|
| 199 |
<day> |
|
| 200 |
<_nullIf> |
|
| 201 |
<null>0</null> |
|
| 202 |
<type>float</type> |
|
| 203 |
<value>$DayCollected</value> |
|
| 204 |
</_nullIf> |
|
| 205 |
</day> |
|
| 206 |
<month> |
|
| 207 |
<_nullIf> |
|
| 208 |
<null>0</null> |
|
| 209 |
<type>float</type> |
|
| 210 |
<value>$MonthCollected</value> |
|
| 211 |
</_nullIf> |
|
| 212 |
</month> |
|
| 213 |
<year> |
|
| 214 |
<_nullIf> |
|
| 215 |
<null>0</null> |
|
| 216 |
<type>float</type> |
|
| 217 |
<value>$YearCollected</value> |
|
| 218 |
</_nullIf> |
|
| 219 |
</year> |
|
| 220 |
</_date> |
|
| 221 |
</1> |
|
| 222 |
</_alt> |
|
| 223 |
</value> |
|
| 224 |
</_dateRangeStart> |
|
| 225 |
</date> |
|
| 226 |
</_date> |
|
| 227 |
</obsstartdate> |
|
| 154 | 228 |
<taxonoccurrence> |
| 155 | 229 |
<aggregateoccurrence> |
| 156 | 230 |
<collectiondate> |
| inputs/XAL/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 15 | 15 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 16 | 16 |
ContinentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 17 | 17 |
FieldNumber,/location/locationevent/authoreventcode, |
| 18 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 19 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 20 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 21 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 22 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 23 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 18 | 24 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 19 | 25 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 20 | 26 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/NY/test/import.specimens.xml.ref | ||
|---|---|---|
| 166 | 166 |
</namedplace_id> |
| 167 | 167 |
</locationdetermination> |
| 168 | 168 |
<locationevent> |
| 169 |
<obsenddate> |
|
| 170 |
<_date> |
|
| 171 |
<date> |
|
| 172 |
<_dateRangeEnd> |
|
| 173 |
<value> |
|
| 174 |
<_alt> |
|
| 175 |
<1> |
|
| 176 |
<_date> |
|
| 177 |
<day> |
|
| 178 |
<_nullIf> |
|
| 179 |
<null>0</null> |
|
| 180 |
<type>float</type> |
|
| 181 |
<value>$DayCollected</value> |
|
| 182 |
</_nullIf> |
|
| 183 |
</day> |
|
| 184 |
<month> |
|
| 185 |
<_nullIf> |
|
| 186 |
<null>0</null> |
|
| 187 |
<type>float</type> |
|
| 188 |
<value>$MonthCollected</value> |
|
| 189 |
</_nullIf> |
|
| 190 |
</month> |
|
| 191 |
<year> |
|
| 192 |
<_nullIf> |
|
| 193 |
<null>0</null> |
|
| 194 |
<type>float</type> |
|
| 195 |
<value>$YearCollected</value> |
|
| 196 |
</_nullIf> |
|
| 197 |
</year> |
|
| 198 |
</_date> |
|
| 199 |
</1> |
|
| 200 |
</_alt> |
|
| 201 |
</value> |
|
| 202 |
</_dateRangeEnd> |
|
| 203 |
</date> |
|
| 204 |
</_date> |
|
| 205 |
</obsenddate> |
|
| 206 |
<obsstartdate> |
|
| 207 |
<_date> |
|
| 208 |
<date> |
|
| 209 |
<_dateRangeStart> |
|
| 210 |
<value> |
|
| 211 |
<_alt> |
|
| 212 |
<1> |
|
| 213 |
<_date> |
|
| 214 |
<day> |
|
| 215 |
<_nullIf> |
|
| 216 |
<null>0</null> |
|
| 217 |
<type>float</type> |
|
| 218 |
<value>$DayCollected</value> |
|
| 219 |
</_nullIf> |
|
| 220 |
</day> |
|
| 221 |
<month> |
|
| 222 |
<_nullIf> |
|
| 223 |
<null>0</null> |
|
| 224 |
<type>float</type> |
|
| 225 |
<value>$MonthCollected</value> |
|
| 226 |
</_nullIf> |
|
| 227 |
</month> |
|
| 228 |
<year> |
|
| 229 |
<_nullIf> |
|
| 230 |
<null>0</null> |
|
| 231 |
<type>float</type> |
|
| 232 |
<value>$YearCollected</value> |
|
| 233 |
</_nullIf> |
|
| 234 |
</year> |
|
| 235 |
</_date> |
|
| 236 |
</1> |
|
| 237 |
</_alt> |
|
| 238 |
</value> |
|
| 239 |
</_dateRangeStart> |
|
| 240 |
</date> |
|
| 241 |
</_date> |
|
| 242 |
</obsstartdate> |
|
| 169 | 243 |
<taxonoccurrence> |
| 170 | 244 |
<aggregateoccurrence> |
| 171 | 245 |
<collectiondate> |
| inputs/NY/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 15 | 15 |
StateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 16 | 16 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 17 | 17 |
ContinentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 18 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 19 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 20 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 21 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 22 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 23 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 18 | 24 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 19 | 25 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 20 | 26 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/UNCC/test/import.specimens.xml.ref | ||
|---|---|---|
| 29 | 29 |
</namedplace_id> |
| 30 | 30 |
</locationdetermination> |
| 31 | 31 |
<locationevent> |
| 32 |
<obsenddate> |
|
| 33 |
<_date> |
|
| 34 |
<date> |
|
| 35 |
<_dateRangeEnd> |
|
| 36 |
<value> |
|
| 37 |
<_alt> |
|
| 38 |
<1> |
|
| 39 |
<_date> |
|
| 40 |
<day> |
|
| 41 |
<_nullIf> |
|
| 42 |
<null>0</null> |
|
| 43 |
<type>float</type> |
|
| 44 |
<value>$collday</value> |
|
| 45 |
</_nullIf> |
|
| 46 |
</day> |
|
| 47 |
<month> |
|
| 48 |
<_nullIf> |
|
| 49 |
<null>0</null> |
|
| 50 |
<type>float</type> |
|
| 51 |
<value>$collmonth</value> |
|
| 52 |
</_nullIf> |
|
| 53 |
</month> |
|
| 54 |
<year> |
|
| 55 |
<_nullIf> |
|
| 56 |
<null>0</null> |
|
| 57 |
<type>float</type> |
|
| 58 |
<value>$collyear</value> |
|
| 59 |
</_nullIf> |
|
| 60 |
</year> |
|
| 61 |
</_date> |
|
| 62 |
</1> |
|
| 63 |
</_alt> |
|
| 64 |
</value> |
|
| 65 |
</_dateRangeEnd> |
|
| 66 |
</date> |
|
| 67 |
</_date> |
|
| 68 |
</obsenddate> |
|
| 69 |
<obsstartdate> |
|
| 70 |
<_date> |
|
| 71 |
<date> |
|
| 72 |
<_dateRangeStart> |
|
| 73 |
<value> |
|
| 74 |
<_alt> |
|
| 75 |
<1> |
|
| 76 |
<_date> |
|
| 77 |
<day> |
|
| 78 |
<_nullIf> |
|
| 79 |
<null>0</null> |
|
| 80 |
<type>float</type> |
|
| 81 |
<value>$collday</value> |
|
| 82 |
</_nullIf> |
|
| 83 |
</day> |
|
| 84 |
<month> |
|
| 85 |
<_nullIf> |
|
| 86 |
<null>0</null> |
|
| 87 |
<type>float</type> |
|
| 88 |
<value>$collmonth</value> |
|
| 89 |
</_nullIf> |
|
| 90 |
</month> |
|
| 91 |
<year> |
|
| 92 |
<_nullIf> |
|
| 93 |
<null>0</null> |
|
| 94 |
<type>float</type> |
|
| 95 |
<value>$collyear</value> |
|
| 96 |
</_nullIf> |
|
| 97 |
</year> |
|
| 98 |
</_date> |
|
| 99 |
</1> |
|
| 100 |
</_alt> |
|
| 101 |
</value> |
|
| 102 |
</_dateRangeStart> |
|
| 103 |
</date> |
|
| 104 |
</_date> |
|
| 105 |
</obsstartdate> |
|
| 32 | 106 |
<taxonoccurrence> |
| 33 | 107 |
<aggregateoccurrence> |
| 34 | 108 |
<collectiondate> |
| inputs/UNCC/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 3 | 3 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 4 | 4 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 5 | 5 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 6 |
collday,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 7 |
collmonth,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 8 |
collyear,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 9 |
collday,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 10 |
collmonth,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 11 |
collyear,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 6 | 12 |
collday,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 7 | 13 |
collmonth,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 8 | 14 |
collyear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/ACAD/test/import.specimens.xml.ref | ||
|---|---|---|
| 73 | 73 |
</namedplace_id> |
| 74 | 74 |
</locationdetermination> |
| 75 | 75 |
<locationevent> |
| 76 |
<obsenddate><_date><date><_dateRangeEnd><value><_alt><2>$eventDate</2></_alt></value></_dateRangeEnd></date></_date></obsenddate> |
|
| 77 |
<obsstartdate><_date><date><_dateRangeStart><value><_alt><2>$eventDate</2></_alt></value></_dateRangeStart></date></_date></obsstartdate> |
|
| 76 | 78 |
<taxonoccurrence> |
| 77 | 79 |
<aggregateoccurrence> |
| 78 | 80 |
<collectiondate><_date><date><_alt><2>$eventDate</2></_alt></date></_date></collectiondate> |
| inputs/ACAD/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 9 | 9 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 10 | 10 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 11 | 11 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 12 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 13 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 12 | 14 |
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2, |
| 13 | 15 |
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/2, |
| 14 | 16 |
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode, |
| inputs/REMIB/test/import.specimens.xml.ref | ||
|---|---|---|
| 51 | 51 |
</namedplace_id> |
| 52 | 52 |
</locationdetermination> |
| 53 | 53 |
<locationevent> |
| 54 |
<obsenddate> |
|
| 55 |
<_date> |
|
| 56 |
<date> |
|
| 57 |
<_dateRangeEnd> |
|
| 58 |
<value> |
|
| 59 |
<_alt> |
|
| 60 |
<1> |
|
| 61 |
<_date> |
|
| 62 |
<day> |
|
| 63 |
<_nullIf> |
|
| 64 |
<null>0</null> |
|
| 65 |
<type>float</type> |
|
| 66 |
<value>$coll_day</value> |
|
| 67 |
</_nullIf> |
|
| 68 |
</day> |
|
| 69 |
<month> |
|
| 70 |
<_nullIf> |
|
| 71 |
<null>0</null> |
|
| 72 |
<type>float</type> |
|
| 73 |
<value>$coll_month</value> |
|
| 74 |
</_nullIf> |
|
| 75 |
</month> |
|
| 76 |
<year> |
|
| 77 |
<_nullIf> |
|
| 78 |
<null>0</null> |
|
| 79 |
<type>float</type> |
|
| 80 |
<value>$coll_year</value> |
|
| 81 |
</_nullIf> |
|
| 82 |
</year> |
|
| 83 |
</_date> |
|
| 84 |
</1> |
|
| 85 |
</_alt> |
|
| 86 |
</value> |
|
| 87 |
</_dateRangeEnd> |
|
| 88 |
</date> |
|
| 89 |
</_date> |
|
| 90 |
</obsenddate> |
|
| 91 |
<obsstartdate> |
|
| 92 |
<_date> |
|
| 93 |
<date> |
|
| 94 |
<_dateRangeStart> |
|
| 95 |
<value> |
|
| 96 |
<_alt> |
|
| 97 |
<1> |
|
| 98 |
<_date> |
|
| 99 |
<day> |
|
| 100 |
<_nullIf> |
|
| 101 |
<null>0</null> |
|
| 102 |
<type>float</type> |
|
| 103 |
<value>$coll_day</value> |
|
| 104 |
</_nullIf> |
|
| 105 |
</day> |
|
| 106 |
<month> |
|
| 107 |
<_nullIf> |
|
| 108 |
<null>0</null> |
|
| 109 |
<type>float</type> |
|
| 110 |
<value>$coll_month</value> |
|
| 111 |
</_nullIf> |
|
| 112 |
</month> |
|
| 113 |
<year> |
|
| 114 |
<_nullIf> |
|
| 115 |
<null>0</null> |
|
| 116 |
<type>float</type> |
|
| 117 |
<value>$coll_year</value> |
|
| 118 |
</_nullIf> |
|
| 119 |
</year> |
|
| 120 |
</_date> |
|
| 121 |
</1> |
|
| 122 |
</_alt> |
|
| 123 |
</value> |
|
| 124 |
</_dateRangeStart> |
|
| 125 |
</date> |
|
| 126 |
</_date> |
|
| 127 |
</obsstartdate> |
|
| 54 | 128 |
<taxonoccurrence> |
| 55 | 129 |
<aggregateoccurrence> |
| 56 | 130 |
<collectiondate> |
| inputs/REMIB/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 5 | 5 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 6 | 6 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 7 | 7 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 8 |
coll_day,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 9 |
coll_month,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 10 |
coll_year,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 11 |
coll_day,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 12 |
coll_month,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 13 |
coll_year,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 8 | 14 |
coll_day,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 9 | 15 |
coll_month,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 10 | 16 |
coll_year,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/U/test/import.specimens.xml.ref | ||
|---|---|---|
| 49 | 49 |
</namedplace_id> |
| 50 | 50 |
</locationdetermination> |
| 51 | 51 |
<locationevent> |
| 52 |
<obsenddate> |
|
| 53 |
<_date> |
|
| 54 |
<date> |
|
| 55 |
<_dateRangeEnd> |
|
| 56 |
<value> |
|
| 57 |
<_alt> |
|
| 58 |
<1> |
|
| 59 |
<_date> |
|
| 60 |
<day> |
|
| 61 |
<_nullIf> |
|
| 62 |
<null>0</null> |
|
| 63 |
<type>float</type> |
|
| 64 |
<value>$Colldd</value> |
|
| 65 |
</_nullIf> |
|
| 66 |
</day> |
|
| 67 |
<month> |
|
| 68 |
<_nullIf> |
|
| 69 |
<null>0</null> |
|
| 70 |
<type>float</type> |
|
| 71 |
<value>$Collmm</value> |
|
| 72 |
</_nullIf> |
|
| 73 |
</month> |
|
| 74 |
<year> |
|
| 75 |
<_nullIf> |
|
| 76 |
<null>0</null> |
|
| 77 |
<type>float</type> |
|
| 78 |
<value>$Collyy</value> |
|
| 79 |
</_nullIf> |
|
| 80 |
</year> |
|
| 81 |
</_date> |
|
| 82 |
</1> |
|
| 83 |
</_alt> |
|
| 84 |
</value> |
|
| 85 |
</_dateRangeEnd> |
|
| 86 |
</date> |
|
| 87 |
</_date> |
|
| 88 |
</obsenddate> |
|
| 89 |
<obsstartdate> |
|
| 90 |
<_date> |
|
| 91 |
<date> |
|
| 92 |
<_dateRangeStart> |
|
| 93 |
<value> |
|
| 94 |
<_alt> |
|
| 95 |
<1> |
|
| 96 |
<_date> |
|
| 97 |
<day> |
|
| 98 |
<_nullIf> |
|
| 99 |
<null>0</null> |
|
| 100 |
<type>float</type> |
|
| 101 |
<value>$Colldd</value> |
|
| 102 |
</_nullIf> |
|
| 103 |
</day> |
|
| 104 |
<month> |
|
| 105 |
<_nullIf> |
|
| 106 |
<null>0</null> |
|
| 107 |
<type>float</type> |
|
| 108 |
<value>$Collmm</value> |
|
| 109 |
</_nullIf> |
|
| 110 |
</month> |
|
| 111 |
<year> |
|
| 112 |
<_nullIf> |
|
| 113 |
<null>0</null> |
|
| 114 |
<type>float</type> |
|
| 115 |
<value>$Collyy</value> |
|
| 116 |
</_nullIf> |
|
| 117 |
</year> |
|
| 118 |
</_date> |
|
| 119 |
</1> |
|
| 120 |
</_alt> |
|
| 121 |
</value> |
|
| 122 |
</_dateRangeStart> |
|
| 123 |
</date> |
|
| 124 |
</_date> |
|
| 125 |
</obsstartdate> |
|
| 52 | 126 |
<taxonoccurrence> |
| 53 | 127 |
<aggregateoccurrence> |
| 54 | 128 |
<collectiondate> |
| inputs/U/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 3 | 3 |
Lat,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
| 4 | 4 |
Long,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
| 5 | 5 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 6 |
Colldd,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 7 |
Collmm,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 8 |
Collyy,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 9 |
Colldd,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 10 |
Collmm,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 11 |
Collyy,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 6 | 12 |
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 7 | 13 |
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 8 | 14 |
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/ARIZ/test/import.specimens.xml.ref | ||
|---|---|---|
| 171 | 171 |
</namedplace_id> |
| 172 | 172 |
</locationdetermination> |
| 173 | 173 |
<locationevent> |
| 174 |
<obsenddate> |
|
| 175 |
<_date> |
|
| 176 |
<date> |
|
| 177 |
<_dateRangeEnd> |
|
| 178 |
<value> |
|
| 179 |
<_alt> |
|
| 180 |
<0>$VerbatimCollectingDate</0> |
|
| 181 |
<1> |
|
| 182 |
<_date> |
|
| 183 |
<day> |
|
| 184 |
<_nullIf> |
|
| 185 |
<null>0</null> |
|
| 186 |
<type>float</type> |
|
| 187 |
<value>$DayCollected</value> |
|
| 188 |
</_nullIf> |
|
| 189 |
</day> |
|
| 190 |
<month> |
|
| 191 |
<_nullIf> |
|
| 192 |
<null>0</null> |
|
| 193 |
<type>float</type> |
|
| 194 |
<value>$MonthCollected</value> |
|
| 195 |
</_nullIf> |
|
| 196 |
</month> |
|
| 197 |
<year> |
|
| 198 |
<_nullIf> |
|
| 199 |
<null>0</null> |
|
| 200 |
<type>float</type> |
|
| 201 |
<value>$YearCollected</value> |
|
| 202 |
</_nullIf> |
|
| 203 |
</year> |
|
| 204 |
</_date> |
|
| 205 |
</1> |
|
| 206 |
</_alt> |
|
| 207 |
</value> |
|
| 208 |
</_dateRangeEnd> |
|
| 209 |
</date> |
|
| 210 |
</_date> |
|
| 211 |
</obsenddate> |
|
| 212 |
<obsstartdate> |
|
| 213 |
<_date> |
|
| 214 |
<date> |
|
| 215 |
<_dateRangeStart> |
|
| 216 |
<value> |
|
| 217 |
<_alt> |
|
| 218 |
<0>$VerbatimCollectingDate</0> |
|
| 219 |
<1> |
|
| 220 |
<_date> |
|
| 221 |
<day> |
|
| 222 |
<_nullIf> |
|
| 223 |
<null>0</null> |
|
| 224 |
<type>float</type> |
|
| 225 |
<value>$DayCollected</value> |
|
| 226 |
</_nullIf> |
|
| 227 |
</day> |
|
| 228 |
<month> |
|
| 229 |
<_nullIf> |
|
| 230 |
<null>0</null> |
|
| 231 |
<type>float</type> |
|
| 232 |
<value>$MonthCollected</value> |
|
| 233 |
</_nullIf> |
|
| 234 |
</month> |
|
| 235 |
<year> |
|
| 236 |
<_nullIf> |
|
| 237 |
<null>0</null> |
|
| 238 |
<type>float</type> |
|
| 239 |
<value>$YearCollected</value> |
|
| 240 |
</_nullIf> |
|
| 241 |
</year> |
|
| 242 |
</_date> |
|
| 243 |
</1> |
|
| 244 |
</_alt> |
|
| 245 |
</value> |
|
| 246 |
</_dateRangeStart> |
|
| 247 |
</date> |
|
| 248 |
</_date> |
|
| 249 |
</obsstartdate> |
|
| 174 | 250 |
<taxonoccurrence> |
| 175 | 251 |
<aggregateoccurrence> |
| 176 | 252 |
<collectiondate> |
| inputs/ARIZ/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 18 | 18 |
StateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 19 | 19 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 20 | 20 |
ContinentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 21 |
VerbatimCollectingDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/0,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 22 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 23 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 24 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 25 |
VerbatimCollectingDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/0,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 26 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 27 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 28 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 21 | 29 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/0,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
| 22 | 30 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 23 | 31 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| inputs/GBIF/test/import.specimens.xml.ref | ||
|---|---|---|
| 157 | 157 |
</namedplace_id> |
| 158 | 158 |
</locationdetermination> |
| 159 | 159 |
<locationevent> |
| 160 |
<obsenddate><_date><date><_dateRangeEnd><value><_alt><2>$LatestDateCollected</2></_alt></value></_dateRangeEnd></date></_date></obsenddate> |
|
| 161 |
<obsstartdate><_date><date><_dateRangeStart><value><_alt><2>$LatestDateCollected</2></_alt></value></_dateRangeStart></date></_date></obsstartdate> |
|
| 160 | 162 |
<taxonoccurrence> |
| 161 | 163 |
<aggregateoccurrence> |
| 162 | 164 |
<collectiondate><_date><date><_alt><2>$LatestDateCollected</2></_alt></date></_date></collectiondate> |
| inputs/GBIF/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 14 | 14 |
County,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 15 | 15 |
StateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 16 | 16 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 17 |
LatestDateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 18 |
LatestDateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 17 | 19 |
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2, |
| 18 | 20 |
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc", |
| 19 | 21 |
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
| inputs/NCU-NCSC/test/import.specimens.xml.ref | ||
|---|---|---|
| 77 | 77 |
</namedplace_id> |
| 78 | 78 |
</locationdetermination> |
| 79 | 79 |
<locationevent> |
| 80 |
<obsenddate><_date><date><_dateRangeEnd><value><_alt><3>$Collect Date</3></_alt></value></_dateRangeEnd></date></_date></obsenddate> |
|
| 81 |
<obsstartdate><_date><date><_dateRangeStart><value><_alt><3>$Collect Date</3></_alt></value></_dateRangeStart></date></_date></obsstartdate> |
|
| 80 | 82 |
<taxonoccurrence> |
| 81 | 83 |
<aggregateoccurrence> |
| 82 | 84 |
<collectiondate><_date><date><_alt><3>$Collect Date</3></_alt></date></_date></collectiondate> |
| inputs/NCU-NCSC/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 8 | 8 |
County,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 9 | 9 |
State,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 10 | 10 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 11 |
Collect Date,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3, |
|
| 12 |
Collect Date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3, |
|
| 11 | 13 |
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/3, |
| 12 | 14 |
Accession Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode, |
| 13 | 15 |
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc", |
| inputs/SpeciesLink/test/import.specimens.xml.ref | ||
|---|---|---|
| 275 | 275 |
<2>$dwc_terms_fieldNumber</2> |
| 276 | 276 |
</_alt> |
| 277 | 277 |
</authoreventcode> |
| 278 |
<obsenddate> |
|
| 279 |
<_date> |
|
| 280 |
<date> |
|
| 281 |
<_dateRangeEnd> |
|
| 282 |
<value> |
|
| 283 |
<_alt> |
|
| 284 |
<1> |
|
| 285 |
<_date> |
|
| 286 |
<day> |
|
| 287 |
<_nullIf> |
|
| 288 |
<null>0</null> |
|
| 289 |
<type>float</type> |
|
| 290 |
<value>$conceptual_darwin_2003_1_0_DayCollected</value> |
|
| 291 |
</_nullIf> |
|
| 292 |
</day> |
|
| 293 |
<month> |
|
| 294 |
<_nullIf> |
|
| 295 |
<null>0</null> |
|
| 296 |
<type>float</type> |
|
| 297 |
<value>$conceptual_darwin_2003_1_0_MonthCollected</value> |
|
| 298 |
</_nullIf> |
|
| 299 |
</month> |
|
| 300 |
<year> |
|
| 301 |
<_nullIf> |
|
| 302 |
<null>0</null> |
|
| 303 |
<type>float</type> |
|
| 304 |
<value>$conceptual_darwin_2003_1_0_YearCollected</value> |
|
| 305 |
</_nullIf> |
|
| 306 |
</year> |
|
| 307 |
</_date> |
|
| 308 |
</1> |
|
| 309 |
</_alt> |
|
| 310 |
</value> |
|
| 311 |
</_dateRangeEnd> |
|
| 312 |
</date> |
|
| 313 |
</_date> |
|
| 314 |
</obsenddate> |
|
| 315 |
<obsstartdate> |
|
| 316 |
<_date> |
|
| 317 |
<date> |
|
| 318 |
<_dateRangeStart> |
|
| 319 |
<value> |
|
| 320 |
<_alt> |
|
| 321 |
<1> |
|
| 322 |
<_date> |
|
| 323 |
<day> |
|
| 324 |
<_nullIf> |
|
| 325 |
<null>0</null> |
|
| 326 |
<type>float</type> |
|
| 327 |
<value>$conceptual_darwin_2003_1_0_DayCollected</value> |
|
| 328 |
</_nullIf> |
|
| 329 |
</day> |
|
| 330 |
<month> |
|
| 331 |
<_nullIf> |
|
| 332 |
<null>0</null> |
|
| 333 |
<type>float</type> |
|
| 334 |
<value>$conceptual_darwin_2003_1_0_MonthCollected</value> |
|
| 335 |
</_nullIf> |
|
| 336 |
</month> |
|
| 337 |
<year> |
|
| 338 |
<_nullIf> |
|
| 339 |
<null>0</null> |
|
| 340 |
<type>float</type> |
|
| 341 |
<value>$conceptual_darwin_2003_1_0_YearCollected</value> |
|
| 342 |
</_nullIf> |
|
| 343 |
</year> |
|
| 344 |
</_date> |
|
| 345 |
</1> |
|
| 346 |
</_alt> |
|
| 347 |
</value> |
|
| 348 |
</_dateRangeStart> |
|
| 349 |
</date> |
|
| 350 |
</_date> |
|
| 351 |
</obsstartdate> |
|
| 278 | 352 |
<taxonoccurrence> |
| 279 | 353 |
<aggregateoccurrence> |
| 280 | 354 |
<collectiondate> |
| inputs/SpeciesLink/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 44 | 44 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 45 | 45 |
FieldNumber,/location/locationevent/authoreventcode, |
| 46 | 46 |
fieldNumber,/location/locationevent/authoreventcode, |
| 47 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 48 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 49 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 50 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 51 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 52 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 47 | 53 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 48 | 54 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 49 | 55 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/MO/test/import.specimens.xml.ref | ||
|---|---|---|
| 149 | 149 |
</namedplace_id> |
| 150 | 150 |
</locationdetermination> |
| 151 | 151 |
<locationevent> |
| 152 |
<obsenddate> |
|
| 153 |
<_date> |
|
| 154 |
<date> |
|
| 155 |
<_dateRangeEnd> |
|
| 156 |
<value> |
|
| 157 |
<_alt> |
|
| 158 |
<1> |
|
| 159 |
<_date> |
|
| 160 |
<day> |
|
| 161 |
<_nullIf> |
|
| 162 |
<null>0</null> |
|
| 163 |
<type>float</type> |
|
| 164 |
<value>$DayCollected</value> |
|
| 165 |
</_nullIf> |
|
| 166 |
</day> |
|
| 167 |
<month> |
|
| 168 |
<_nullIf> |
|
| 169 |
<null>0</null> |
|
| 170 |
<type>float</type> |
|
| 171 |
<value>$MonthCollected</value> |
|
| 172 |
</_nullIf> |
|
| 173 |
</month> |
|
| 174 |
<year> |
|
| 175 |
<_nullIf> |
|
| 176 |
<null>0</null> |
|
| 177 |
<type>float</type> |
|
| 178 |
<value>$YearCollected</value> |
|
| 179 |
</_nullIf> |
|
| 180 |
</year> |
|
| 181 |
</_date> |
|
| 182 |
</1> |
|
| 183 |
</_alt> |
|
| 184 |
</value> |
|
| 185 |
</_dateRangeEnd> |
|
| 186 |
</date> |
|
| 187 |
</_date> |
|
| 188 |
</obsenddate> |
|
| 189 |
<obsstartdate> |
|
| 190 |
<_date> |
|
| 191 |
<date> |
|
| 192 |
<_dateRangeStart> |
|
| 193 |
<value> |
|
| 194 |
<_alt> |
|
| 195 |
<1> |
|
| 196 |
<_date> |
|
| 197 |
<day> |
|
| 198 |
<_nullIf> |
|
| 199 |
<null>0</null> |
|
| 200 |
<type>float</type> |
|
| 201 |
<value>$DayCollected</value> |
|
| 202 |
</_nullIf> |
|
| 203 |
</day> |
|
| 204 |
<month> |
|
| 205 |
<_nullIf> |
|
| 206 |
<null>0</null> |
|
| 207 |
<type>float</type> |
|
| 208 |
<value>$MonthCollected</value> |
|
| 209 |
</_nullIf> |
|
| 210 |
</month> |
|
| 211 |
<year> |
|
| 212 |
<_nullIf> |
|
| 213 |
<null>0</null> |
|
| 214 |
<type>float</type> |
|
| 215 |
<value>$YearCollected</value> |
|
| 216 |
</_nullIf> |
|
| 217 |
</year> |
|
| 218 |
</_date> |
|
| 219 |
</1> |
|
| 220 |
</_alt> |
|
| 221 |
</value> |
|
| 222 |
</_dateRangeStart> |
|
| 223 |
</date> |
|
| 224 |
</_date> |
|
| 225 |
</obsstartdate> |
|
| 152 | 226 |
<taxonoccurrence> |
| 153 | 227 |
<aggregateoccurrence> |
| 154 | 228 |
<collectiondate> |
| inputs/MO/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 13 | 13 |
StateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 14 | 14 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 15 | 15 |
ContinentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 16 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 17 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 18 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 19 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 20 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 21 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 16 | 22 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
| 17 | 23 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
| 18 | 24 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/QMOR/test/import.specimens.xml.ref | ||
|---|---|---|
| 172 | 172 |
</locationdetermination> |
| 173 | 173 |
<locationevent> |
| 174 | 174 |
<method_id><method><name>$samplingProtocol</name></method></method_id> |
| 175 |
<obsenddate><_date><date><_dateRangeEnd><value><_alt><2>$eventDate</2></_alt></value></_dateRangeEnd></date></_date></obsenddate> |
|
| 176 |
<obsstartdate><_date><date><_dateRangeStart><value><_alt><2>$eventDate</2></_alt></value></_dateRangeStart></date></_date></obsstartdate> |
|
| 175 | 177 |
<taxonoccurrence> |
| 176 | 178 |
<aggregateoccurrence> |
| 177 | 179 |
<collectiondate><_date><date><_alt><2>$eventDate</2></_alt></date></_date></collectiondate> |
| inputs/QMOR/maps/VegBIEN.specimens.csv | ||
|---|---|---|
| 19 | 19 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 20 | 20 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 21 | 21 |
samplingProtocol,/location/locationevent/*_id/method/name, |
| 22 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 23 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 22 | 24 |
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2, |
| 23 | 25 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 24 | 26 |
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
| mappings/DwC2-VegBIEN.specimens.csv | ||
|---|---|---|
| 21 | 21 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 22 | 22 |
samplingProtocol,/location/locationevent/*_id/method/name, |
| 23 | 23 |
fieldNumber,/location/locationevent/authoreventcode, |
| 24 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value, |
|
| 25 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value, |
|
| 24 | 26 |
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date, |
| 25 | 27 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 26 | 28 |
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| mappings/DwC-VegBIEN.specimens.csv | ||
|---|---|---|
| 63 | 63 |
samplingProtocol,/location/locationevent/*_id/method/name, |
| 64 | 64 |
FieldNumber,/location/locationevent/authoreventcode, |
| 65 | 65 |
fieldNumber,/location/locationevent/authoreventcode, |
| 66 |
EventDate/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 67 |
eventDate/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 68 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 69 |
dayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 70 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 71 |
monthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 72 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 73 |
yearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 74 |
EventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 75 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2, |
|
| 76 |
CollectedDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3, |
|
| 77 |
collectedDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/3, |
|
| 78 |
EventDate/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 79 |
eventDate/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
|
| 80 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 81 |
dayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 82 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 83 |
monthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 84 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 85 |
yearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 86 |
EventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 87 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 88 |
CollectedDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3, |
|
| 89 |
collectedDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/3, |
|
| 66 | 90 |
EventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
| 67 | 91 |
eventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping |
| 68 | 92 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
Also available in: Unified diff
mappings/DwC2-VegBIEN.specimens.csv: eventDate: Also map to obsstartdate/obsenddate, since the collectiondate is also the event date for specimens data, and for mergability with VegCSV