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1
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DwC,VegBIEN:,Comments
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2
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institutionCode,/location/authorlocationcode/_merge/1,
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3
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collectionCode,/location/authorlocationcode/_merge/2,
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4
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catalogNumber,/location/authorlocationcode/_merge/3,
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5
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verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
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6
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maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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7
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minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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8
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minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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9
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maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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10
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minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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11
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coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
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12
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coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
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13
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footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
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14
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decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
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15
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verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
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16
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decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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17
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verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
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18
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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19
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stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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20
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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21
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continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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22
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samplingProtocol,/location/locationevent/*_id/method/name,
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23
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fieldNumber,/location/locationevent/authoreventcode,
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24
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eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,
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25
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eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,
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26
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eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date,
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27
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individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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28
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fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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29
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
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30
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sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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31
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
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32
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catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
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33
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collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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34
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collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
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35
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber,
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36
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institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
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37
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
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38
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establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
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39
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establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
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40
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occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
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41
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recordNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2,
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42
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
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43
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
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44
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
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45
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scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
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46
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scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
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47
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infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
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48
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specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
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49
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genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
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50
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family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
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51
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order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
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52
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class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
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53
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phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
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54
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kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
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55
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dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value,
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56
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taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
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57
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identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
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58
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recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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59
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maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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60
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minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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61
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locality,/location/locationnarrative/_merge/1,
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62
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verbatimLocality,/location/locationnarrative/_merge/2,
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63
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habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
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64
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occurrenceID,/location/sourceaccessioncode/_alt/1,
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65
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locationID,/location/sourceaccessioncode/_alt/2,
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66
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acceptedNameUsage,,
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67
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acceptedNameUsageID,,
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68
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associatedMedia,,
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69
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associatedOccurrences,,
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70
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associatedReferences,,
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71
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associatedSequences,,
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72
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associatedTaxa,,
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73
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basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
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74
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bed,,
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75
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behavior,,
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76
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countryCode,,
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77
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dataGeneralizations,,
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78
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datasetID,,
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79
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datasetName,,
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80
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day,,Brad: OMIT
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81
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dcterms:accessRights,,
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82
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dcterms:bibliographicCitation,,
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83
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dcterms:language,,
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84
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dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
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85
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dcterms:references,,
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86
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dcterms:rights,,
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87
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dcterms:rightsHolder,,
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88
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dcterms:type,,
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89
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disposition,,
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90
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dynamicProperties,,
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91
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earliestAgeOrLowestStage,,
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92
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earliestEonOrLowestEonothem,,
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93
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earliestEpochOrLowestSeries,,
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94
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earliestEraOrLowestErathem,,
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95
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earliestPeriodOrLowestSystem,,
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96
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endDayOfYear,,
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97
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eventID,,
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98
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eventRemarks,,
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99
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eventTime,,Brad: OMIT
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100
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footprintSRS,,
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101
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footprintSpatialFit,,
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102
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formation,,
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103
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geodeticDatum,,
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104
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geologicalContextID,,
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105
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georeferenceProtocol,,
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106
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georeferenceRemarks,,
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107
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georeferenceSources,,
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108
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georeferenceVerificationStatus,,
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109
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georeferencedBy,,
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110
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georeferencedDate,,
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111
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group,,
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112
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higherClassification,,
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113
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higherGeography,,
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114
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higherGeographyID,,
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115
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highestBiostratigraphicZone,,
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116
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identificationID,,
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117
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identificationReferences,,
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118
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identificationRemarks,,
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119
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identificationVerificationStatus,,
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120
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individualID,,
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121
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informationWithheld,,
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122
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institutionID,,
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123
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island,,
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124
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islandGroup,,
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125
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latestAgeOrHighestStage,,
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126
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latestEonOrHighestEonothem,,
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127
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latestEpochOrHighestSeries,,
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128
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latestEraOrHighestErathem,,
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129
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latestPeriodOrHighestSystem,,
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130
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lifeStage,,
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131
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lithostratigraphicTerms,,
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132
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locationAccordingTo,,
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133
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locationRemarks,,
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134
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lowestBiostratigraphicZone,,
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135
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maximumDistanceAboveSurfaceInMeters,,
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136
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measurementAccuracy,,
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137
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measurementDeterminedBy,,
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138
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measurementDeterminedDate,,
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139
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measurementID,,
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140
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measurementMethod,,
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141
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measurementRemarks,,
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142
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measurementType,,
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143
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measurementUnit,,
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144
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measurementValue,,
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145
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member,,
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146
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minimumDistanceAboveSurfaceInMeters,,
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147
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month,,
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148
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municipality,,
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149
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nameAccordingTo,,
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150
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nameAccordingToID,,
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151
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namePublishedIn,,
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152
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namePublishedInID,,
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153
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namePublishedInYear,,
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154
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nomenclaturalCode,,
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155
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nomenclaturalStatus,,
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156
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occurrenceRemarks,,
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157
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occurrenceStatus,,
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158
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originalNameUsage,,
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159
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originalNameUsageID,,
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160
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otherCatalogNumbers,,
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161
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ownerInstitutionCode,,
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162
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parentNameUsage,,
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163
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parentNameUsageID,,
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164
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pointRadiusSpatialFit,,
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165
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preparations,,Brad: OMIT
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166
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previousIdentifications,,Brad: OMIT
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167
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relatedResourceID,,Brad: OMIT
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168
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relationshipAccordingTo,,
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169
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relationshipEstablishedDate,,
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170
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relationshipOfResource,,Brad: OMIT
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171
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relationshipRemarks,,
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172
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reproductiveCondition,,
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173
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resourceID,,
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174
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resourceRelationshipID,,
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175
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samplingEffort,,
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176
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scientificNameID,,
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177
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startDayOfYear,,
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178
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subgenus,,
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179
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taxonConceptID,,
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180
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taxonID,,
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181
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taxonRank,,
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182
|
taxonomicStatus,,
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183
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typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
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184
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verbatimCoordinateSystem,,
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185
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verbatimCoordinates,,
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186
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verbatimDepth,,
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187
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verbatimEventDate,,
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188
|
verbatimSRS,,
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189
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verbatimTaxonRank,,
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190
|
vernacularName,,
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191
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waterBody,,
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192
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year,,
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