Project

General

Profile

« Previous | Next » 

Revision 4057

mappings/DwC2-VegBIEN.specimens.csv: catalogNumber: Moved direct/indirect voucher _if inwards to wrap just the value of catalognumber_dwc, not the catalognumber_dwc field node, to match the corresponding VegCSV mapping

View differences:

inputs/XAL/test/import.specimens.xml.ref
250 250
                            <definedvalue>$Sex</definedvalue>
251 251
                        </definedvalue>
252 252
                        <specimenreplicate>
253
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
253
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$CatalogNumber</else></_if></catalognumber_dwc>
254 254
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
255 255
                            <collectionnumber>$CollectorNumber</collectionnumber>
256 256
                            <institution_id><party><organizationname>$InstitutionCode</organizationname></party></institution_id>
inputs/XAL/maps/VegBIEN.specimens.csv
28 28
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
29 29
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/1,
30 30
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
31
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
31
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
32 32
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
33 33
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
34 34
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
inputs/NY/test/import.specimens.xml.ref
281 281
                        </definedvalue>
282 282
                        <sourceaccessioncode>$UniqueNYInternalRecordNumber</sourceaccessioncode>
283 283
                        <specimenreplicate>
284
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
284
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$CatalogNumber</else></_if></catalognumber_dwc>
285 285
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
286 286
                            <collectionnumber>
287 287
                                <_alt>
inputs/NY/maps/VegBIEN.specimens.csv
31 31
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/2,Usage inconsistent with DwC definition
32 32
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
33 33
UniqueNYInternalRecordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
34
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
34
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
35 35
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
36 36
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
37 37
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,Usage inconsistent with DwC definition
inputs/ACAD/test/import.specimens.xml.ref
69 69
                        <authorplantcode>$recordNumber</authorplantcode>
70 70
                        <sourceaccessioncode>$id</sourceaccessioncode>
71 71
                        <specimenreplicate>
72
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$catalogNumber</catalognumber_dwc></else></_if>
72
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$catalogNumber</else></_if></catalognumber_dwc>
73 73
                            <collectioncode_dwc>
74 74
                                <_merge>
75 75
                                    <1>$collectionCode</1>
inputs/ACAD/maps/VegBIEN.specimens.csv
13 13
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1,
14 14
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/2,
15 15
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
16
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
16
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
17 17
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
18 18
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
19 19
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
inputs/U/test/import.specimens.xml.ref
143 143
                        <authorplantcode>$Number</authorplantcode>
144 144
                        <sourceaccessioncode>$ID</sourceaccessioncode>
145 145
                        <specimenreplicate>
146
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$Barcode</catalognumber_dwc></else></_if>
146
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$Barcode</else></_if></catalognumber_dwc>
147 147
                            <collectionnumber>$Number</collectionnumber>
148 148
                            <sourceaccessioncode>$ID</sourceaccessioncode>
149 149
                        </specimenreplicate>
inputs/U/maps/VegBIEN.specimens.csv
15 15
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
16 16
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/2,
17 17
ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
18
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
18
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
19 19
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
20 20
ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
21 21
ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
inputs/ARIZ/test/import.specimens.xml.ref
303 303
                        </definedvalue>
304 304
                        <sourceaccessioncode>$GlobalUniqueIdentifier</sourceaccessioncode>
305 305
                        <specimenreplicate>
306
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumberNumeric</catalognumber_dwc></else></_if>
306
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$CatalogNumberNumeric</else></_if></catalognumber_dwc>
307 307
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
308 308
                            <collectionnumber>
309 309
                                <_alt>
inputs/ARIZ/maps/VegBIEN.specimens.csv
36 36
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/2,Usage inconsistent with DwC definition
37 37
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
38 38
GlobalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
39
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
39
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
40 40
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
41 41
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
42 42
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,Usage inconsistent with DwC definition
inputs/GBIF/test/import.specimens.xml.ref
160 160
                    <collectiondate><_date><date>$LatestDateCollected</date></_date></collectiondate>
161 161
                    <plantobservation>
162 162
                        <specimenreplicate>
163
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNO</catalognumber_dwc></else></_if>
163
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$CatalogNO</else></_if></catalognumber_dwc>
164 164
                            <collectioncode_dwc>$CollectionCD</collectioncode_dwc>
165 165
                            <institution_id><party><organizationname>$InstitutionCD</organizationname></party></institution_id>
166 166
                        </specimenreplicate>
inputs/GBIF/maps/VegBIEN.specimens.csv
17 17
LatestDateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/2,
18 18
LatestDateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/2,
19 19
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2,
20
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
20
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
21 21
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
22 22
InstitutionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
23 23
CatalogNO,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2/_if[@name=""if indirect voucher""]/else",
inputs/NCU-NCSC/test/import.specimens.xml.ref
73 73
                    <plantobservation>
74 74
                        <sourceaccessioncode>$Accession Number</sourceaccessioncode>
75 75
                        <specimenreplicate>
76
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$Barcode</catalognumber_dwc></else></_if>
76
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$Barcode</else></_if></catalognumber_dwc>
77 77
                            <collectioncode_dwc>$SeriesName</collectioncode_dwc>
78 78
                            <sourceaccessioncode>$Accession Number</sourceaccessioncode>
79 79
                        </specimenreplicate>
inputs/NCU-NCSC/maps/VegBIEN.specimens.csv
12 12
Collect Date,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/3,
13 13
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/3,
14 14
Accession Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
15
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
15
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
16 16
SeriesName,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
17 17
Accession Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
18 18
Cultivated?,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value/_map:[Yes=cultivated,No=wild]/value",
inputs/SpeciesLink/test/import.specimens.xml.ref
405 405
                        </definedvalue>
406 406
                        <sourceaccessioncode>$dwc_dwcore_GlobalUniqueIdentifier</sourceaccessioncode>
407 407
                        <specimenreplicate>
408
                            <_if name="if indirect voucher">
409
                                <else>
410
                                    <catalognumber_dwc>
408
                            <catalognumber_dwc>
409
                                <_if name="if indirect voucher">
410
                                    <else>
411 411
                                        <_merge>
412 412
                                            <0>$dwc_dwcore_CatalogNumber</0>
413 413
                                            <1>$conceptual_darwin_2003_1_0_CatalogNumber</1>
414 414
                                            <2>$dwc_terms_catalogNumber</2>
415 415
                                        </_merge>
416
                                    </catalognumber_dwc>
417
                                </else>
418
                            </_if>
416
                                    </else>
417
                                </_if>
418
                            </catalognumber_dwc>
419 419
                            <collectioncode_dwc>
420 420
                                <_merge>
421 421
                                    <1>
inputs/SpeciesLink/maps/VegBIEN.specimens.csv
61 61
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
62 62
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
63 63
GlobalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
64
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
65
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
64
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
65
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
66 66
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
67 67
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
68 68
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
inputs/MO/test/import.specimens.xml.ref
239 239
                    <plantobservation>
240 240
                        <authorplantcode>$CollectorNumber</authorplantcode>
241 241
                        <specimenreplicate>
242
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$CatalogNumber</catalognumber_dwc></else></_if>
242
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$CatalogNumber</else></_if></catalognumber_dwc>
243 243
                            <collectioncode_dwc>$CollectionCode</collectioncode_dwc>
244 244
                            <collectionnumber>$CollectorNumber</collectionnumber>
245 245
                            <institution_id><party><organizationname>$InstitutionCode</organizationname></party></institution_id>
inputs/MO/maps/VegBIEN.specimens.csv
25 25
IndividualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
26 26
convertednotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
27 27
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_alt/1,
28
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
28
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
29 29
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
30 30
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
31 31
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
inputs/QMOR/test/import.specimens.xml.ref
189 189
                        </definedvalue>
190 190
                        <sourceaccessioncode>$id</sourceaccessioncode>
191 191
                        <specimenreplicate>
192
                            <_if name="if indirect voucher"><else><catalognumber_dwc>$catalogNumber</catalognumber_dwc></else></_if>
192
                            <catalognumber_dwc><_if name="if indirect voucher"><else>$catalogNumber</else></_if></catalognumber_dwc>
193 193
                            <collectioncode_dwc>
194 194
                                <_merge>
195 195
                                    <1>$collectionCode</1>
inputs/QMOR/maps/VegBIEN.specimens.csv
24 24
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
25 25
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
26 26
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
27
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
27
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
28 28
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
29 29
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
30 30
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
mappings/DwC2-VegBIEN.specimens.csv
31 31
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
32 32
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
33 33
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
34
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
34
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
35 35
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
36 36
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
37 37
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber,
mappings/for_review/DwC2-VegBIEN.specimens.csv
31 31
recordNumber,//plantobservation/authorplantcode,
32 32
sex,"//plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
33 33
occurrenceID,//plantobservation/sourceaccessioncode,
34
catalogNumber,"//plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
34
catalogNumber,"//specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
35 35
collectionCode,//specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
36 36
collectionID,//specimenreplicate/collectioncode_dwc,
37 37
recordNumber,//specimenreplicate/collectionnumber,
mappings/DwC-VegBIEN.specimens.csv
121 121
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
122 122
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
123 123
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
124
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
125
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
124
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
125
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
126 126
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
127 127
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
128 128
CollectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
mappings/DwC.cs-VegBIEN.specimens.csv
60 60
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
61 61
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
62 62
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
63
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
63
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
64 64
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
65 65
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
66 66
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,

Also available in: Unified diff