| 1 |
1244
|
aaronmk
|
SELECT '# specimen replicates' AS ___;
|
| 2 |
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SELECT count(*) AS count FROM nybg_raw;
|
| 3 |
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| 4 |
|
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SELECT '# families' AS ___;
|
| 5 |
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SELECT count(DISTINCT Family) AS count FROM nybg_raw;
|
| 6 |
|
|
|
| 7 |
1246
|
aaronmk
|
SELECT '# genera' AS ___;
|
| 8 |
|
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SELECT count(DISTINCT Genus) AS count FROM nybg_raw;
|
| 9 |
|
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| 10 |
|
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SELECT '# species' AS ___;
|
| 11 |
|
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SELECT count(DISTINCT Genus, Species) AS count FROM nybg_raw;
|
| 12 |
|
|
|
| 13 |
1254
|
aaronmk
|
SELECT '# binomials' AS ___;
|
| 14 |
|
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SELECT count(DISTINCT ScientificName) AS count FROM nybg_raw;
|
| 15 |
|
|
|
| 16 |
1297
|
aaronmk
|
SELECT 'collection codes' AS ___;
|
| 17 |
|
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SELECT DISTINCT CollectionCode AS collectioncode_dwc FROM nybg_raw;
|
| 18 |
1244
|
aaronmk
|
|
| 19 |
1297
|
aaronmk
|
SELECT '# catalog numbers' AS ___;
|
| 20 |
|
|
SELECT count(DISTINCT CatalogNumber) AS count FROM nybg_raw;
|
| 21 |
1244
|
aaronmk
|
|
| 22 |
1300
|
aaronmk
|
SELECT 'duplicate catalog numbers' AS ___;
|
| 23 |
|
|
SELECT CatalogNumber AS catalognumber_dwc, count(*) AS count
|
| 24 |
|
|
FROM nybg_raw
|
| 25 |
|
|
GROUP BY CatalogNumber
|
| 26 |
|
|
HAVING count > 1
|
| 27 |
|
|
;
|
| 28 |
|
|
|
| 29 |
1298
|
aaronmk
|
SELECT '# counties' AS ___;
|
| 30 |
|
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SELECT count(DISTINCT Country, StateProvince, County) AS count FROM nybg_raw;
|
| 31 |
|
|
|
| 32 |
1297
|
aaronmk
|
/*
|
| 33 |
1244
|
aaronmk
|
SELECT COUNT(*) as totalRecords, COUNT(DISTINCT CatalogNumber) as uniqueCatalogNumbers
|
| 34 |
|
|
FROM nybg_raw;
|
| 35 |
|
|
|
| 36 |
|
|
SELECT CatalogNumber, COUNT(*) AS records
|
| 37 |
|
|
FROM nybg_raw
|
| 38 |
|
|
GROUP BY CatalogNumber
|
| 39 |
|
|
HAVING records>1;
|
| 40 |
|
|
|
| 41 |
|
|
SELECT b.CatalogNumber, DateLastModified, ScientificName, Collector, FieldNumber,
|
| 42 |
|
|
CollectedDate
|
| 43 |
|
|
FROM nybg_raw AS a JOIN (
|
| 44 |
|
|
SELECT CatalogNumber, COUNT(*) AS records
|
| 45 |
|
|
FROM nybg_raw
|
| 46 |
|
|
WHERE CatalogNumber IS NOT NULL
|
| 47 |
|
|
GROUP BY CatalogNumber
|
| 48 |
|
|
HAVING records>1
|
| 49 |
|
|
) AS b
|
| 50 |
|
|
ON a.CatalogNumber=b.CatalogNumber
|
| 51 |
|
|
ORDER BY b.CatalogNumber ASC, DateLastModified DESC;
|
| 52 |
|
|
|
| 53 |
|
|
SELECT DateLastModified, ScientificName, Collector, FieldNumber,
|
| 54 |
|
|
CollectedDate
|
| 55 |
|
|
FROM nybg_raw
|
| 56 |
|
|
WHERE CatalogNumber IS NULL
|
| 57 |
|
|
ORDER BY CatalogNumber ASC, DateLastModified DESC
|
| 58 |
|
|
LIMIT 12;
|
| 59 |
|
|
|
| 60 |
|
|
SELECT
|
| 61 |
|
|
(
|
| 62 |
|
|
SELECT COUNT(*)
|
| 63 |
|
|
FROM nybg_raw
|
| 64 |
|
|
WHERE Latitude IS NOT NULL
|
| 65 |
|
|
) AS allLats,
|
| 66 |
|
|
(
|
| 67 |
|
|
SELECT COUNT(*)
|
| 68 |
|
|
FROM nybg_raw
|
| 69 |
|
|
WHERE Latitude REGEXP '^(-|\\+){0,1}([0-9]+\\.[0-9]*|[0-9]*\\.[0-9]+|[0-9]+)$'
|
| 70 |
|
|
) AS decimalLats,
|
| 71 |
|
|
(
|
| 72 |
|
|
SELECT COUNT(*)
|
| 73 |
|
|
FROM nybg_raw
|
| 74 |
|
|
WHERE Longitude IS NOT NULL
|
| 75 |
|
|
) AS allLongs,
|
| 76 |
|
|
(
|
| 77 |
|
|
SELECT COUNT(*)
|
| 78 |
|
|
FROM nybg_raw
|
| 79 |
|
|
WHERE Longitude REGEXP '^(-|\\+){0,1}([0-9]+\\.[0-9]*|[0-9]*\\.[0-9]+|[0-9]+)$'
|
| 80 |
|
|
) AS decimalLongs;
|
| 81 |
|
|
|
| 82 |
|
|
SELECT Latitude, Longitude
|
| 83 |
|
|
FROM nybg_raw
|
| 84 |
|
|
WHERE Latitude IS NOT NULL AND Longitude IS NOT NULL
|
| 85 |
|
|
LIMIT 10;
|
| 86 |
|
|
|
| 87 |
|
|
SELECT
|
| 88 |
|
|
(
|
| 89 |
|
|
SELECT COUNT(*)
|
| 90 |
|
|
FROM nybg_raw
|
| 91 |
|
|
WHERE Latitude>90 OR Latitude<-90
|
| 92 |
|
|
) AS badLats,
|
| 93 |
|
|
(
|
| 94 |
|
|
SELECT COUNT(*)
|
| 95 |
|
|
FROM nybg_raw
|
| 96 |
|
|
WHERE Longitude>180 OR Longitude<-180
|
| 97 |
|
|
) AS badLongs;
|
| 98 |
|
|
|
| 99 |
|
|
SELECT DayCollected, MonthCollected, YearCollected
|
| 100 |
|
|
FROM nybg_raw
|
| 101 |
|
|
WHERE DayCollected IS NOT NULL OR MonthCollected IS NOT NULL OR YearCollected IS NOT NULL
|
| 102 |
|
|
LIMIT 10;
|
| 103 |
|
|
|
| 104 |
|
|
SELECT
|
| 105 |
|
|
(
|
| 106 |
|
|
SELECT COUNT(*)
|
| 107 |
|
|
FROM nybg_raw
|
| 108 |
|
|
WHERE NOT(DayCollected REGEXP '^-?[0-9]+$')
|
| 109 |
|
|
OR NOT(MonthCollected REGEXP '^-?[0-9]+$')
|
| 110 |
|
|
OR NOT(YearCollected REGEXP '^-?[0-9]+$')
|
| 111 |
|
|
) AS badDateCollected,
|
| 112 |
|
|
(
|
| 113 |
|
|
SELECT COUNT(*)
|
| 114 |
|
|
FROM nybg_raw
|
| 115 |
|
|
WHERE NOT(DayIdentified REGEXP '^-?[0-9]+$')
|
| 116 |
|
|
OR NOT(MonthIdentified REGEXP '^-?[0-9]+$')
|
| 117 |
|
|
OR NOT(YearIdentified REGEXP '^-?[0-9]+$')
|
| 118 |
|
|
) AS badDateIdentified;
|
| 119 |
|
|
|
| 120 |
|
|
SELECT Locality
|
| 121 |
|
|
FROM nybg_raw
|
| 122 |
|
|
WHERE Locality IS NOT NULL
|
| 123 |
|
|
LIMIT 10;
|
| 124 |
|
|
|
| 125 |
|
|
SELECT PlantFungusDescription
|
| 126 |
|
|
FROM nybg_raw
|
| 127 |
|
|
WHERE PlantFungusDescription IS NOT NULL
|
| 128 |
|
|
LIMIT 10;
|
| 129 |
|
|
|
| 130 |
|
|
SELECT Habitat, Vegetation
|
| 131 |
|
|
FROM nybg_raw
|
| 132 |
|
|
WHERE Habitat IS NOT NULL OR Vegetation IS NOT NULL
|
| 133 |
|
|
LIMIT 10;
|
| 134 |
|
|
*/
|
