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1
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DwC,VegBIEN:,Comments
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2
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occurrenceID,/location/authorlocationcode/_alt/3,
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3
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institutionCode,/location/authorlocationcode/_alt/4/_merge/1,
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4
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collectionCode,/location/authorlocationcode/_alt/4/_merge/2/_merge/1,
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5
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collectionID,/location/authorlocationcode/_alt/4/_merge/2/_merge/2,
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6
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catalogNumber,"/location/authorlocationcode/_alt/4/_merge/3/_if[@name=""if indirect voucher""]/else",
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7
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verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
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8
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maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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9
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minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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10
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minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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11
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maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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12
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minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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13
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coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
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14
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coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
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15
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footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
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16
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decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
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17
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verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
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18
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decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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19
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verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
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20
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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21
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stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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22
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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23
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continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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24
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samplingProtocol,/location/locationevent/*_id/method/name,
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25
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fieldNumber,/location/locationevent/authoreventcode,
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26
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eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1,
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27
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dateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2,
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28
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eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1,
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29
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dateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2,
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30
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dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date,
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31
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individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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32
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fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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33
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
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34
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sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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35
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
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36
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catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
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37
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collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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38
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collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
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39
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber,
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40
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institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
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41
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
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42
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recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
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43
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establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
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44
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establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
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45
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occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode,
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46
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
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47
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
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48
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
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49
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scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
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50
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scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
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51
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infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
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52
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specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
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53
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genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
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54
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family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
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55
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order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
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56
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class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
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57
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phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
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58
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kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
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59
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dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value,
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60
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taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
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61
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identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
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62
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recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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63
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maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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64
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minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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65
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locality,/location/locationnarrative/_merge/1,
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66
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verbatimLocality,/location/locationnarrative/_merge/2,
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67
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habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
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68
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locationID,/location/sourceaccessioncode,
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69
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acceptedNameUsage,,
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70
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acceptedNameUsageID,,
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71
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associatedMedia,,
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72
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associatedOccurrences,,
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73
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associatedReferences,,
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74
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associatedSequences,,
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75
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associatedTaxa,,
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76
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basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
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77
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bed,,
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78
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behavior,,
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79
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countryCode,,
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80
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dataGeneralizations,,
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81
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datasetID,,
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82
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datasetName,,
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83
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day,,Brad: OMIT
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84
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dcterms:accessRights,,
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85
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dcterms:bibliographicCitation,,
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86
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dcterms:language,,
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87
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dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
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88
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dcterms:references,,
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89
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dcterms:rights,,
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90
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dcterms:rightsHolder,,
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91
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dcterms:type,,
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92
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disposition,,
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93
|
dynamicProperties,,
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94
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earliestAgeOrLowestStage,,
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95
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earliestEonOrLowestEonothem,,
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96
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earliestEpochOrLowestSeries,,
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97
|
earliestEraOrLowestErathem,,
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98
|
earliestPeriodOrLowestSystem,,
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99
|
endDayOfYear,,
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100
|
eventID,,
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101
|
eventRemarks,,
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102
|
eventTime,,Brad: OMIT
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103
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footprintSRS,,
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104
|
footprintSpatialFit,,
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105
|
formation,,
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106
|
geodeticDatum,,
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107
|
geologicalContextID,,
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108
|
georeferenceProtocol,,
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109
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georeferenceRemarks,,
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110
|
georeferenceSources,,
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111
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georeferenceVerificationStatus,,
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112
|
georeferencedBy,,
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113
|
georeferencedDate,,
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114
|
group,,
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115
|
higherClassification,,
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116
|
higherGeography,,
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117
|
higherGeographyID,,
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118
|
highestBiostratigraphicZone,,
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119
|
identificationID,,
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120
|
identificationReferences,,
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121
|
identificationRemarks,,
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122
|
identificationVerificationStatus,,
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123
|
individualID,,
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124
|
informationWithheld,,
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125
|
institutionID,,
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126
|
island,,
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127
|
islandGroup,,
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128
|
latestAgeOrHighestStage,,
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129
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latestEonOrHighestEonothem,,
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130
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latestEpochOrHighestSeries,,
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131
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latestEraOrHighestErathem,,
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132
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latestPeriodOrHighestSystem,,
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133
|
lifeStage,,
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134
|
lithostratigraphicTerms,,
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135
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locationAccordingTo,,
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136
|
locationRemarks,,
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137
|
lowestBiostratigraphicZone,,
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138
|
maximumDistanceAboveSurfaceInMeters,,
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139
|
measurementAccuracy,,
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140
|
measurementDeterminedBy,,
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141
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measurementDeterminedDate,,
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142
|
measurementID,,
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143
|
measurementMethod,,
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144
|
measurementRemarks,,
|
|
145
|
measurementType,,
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146
|
measurementUnit,,
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147
|
measurementValue,,
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148
|
member,,
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|
149
|
minimumDistanceAboveSurfaceInMeters,,
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150
|
month,,
|
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151
|
municipality,,
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152
|
nameAccordingTo,,
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153
|
nameAccordingToID,,
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154
|
namePublishedIn,,
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155
|
namePublishedInID,,
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156
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namePublishedInYear,,
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157
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nomenclaturalCode,,
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158
|
nomenclaturalStatus,,
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159
|
occurrenceRemarks,,
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160
|
occurrenceStatus,,
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161
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originalNameUsage,,
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162
|
originalNameUsageID,,
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163
|
otherCatalogNumbers,,
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164
|
ownerInstitutionCode,,
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165
|
parentNameUsage,,
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166
|
parentNameUsageID,,
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167
|
pointRadiusSpatialFit,,
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168
|
preparations,,Brad: OMIT
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169
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previousIdentifications,,Brad: OMIT
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170
|
relatedResourceID,,Brad: OMIT
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171
|
relationshipAccordingTo,,
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172
|
relationshipEstablishedDate,,
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173
|
relationshipOfResource,,Brad: OMIT
|
|
174
|
relationshipRemarks,,
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|
175
|
reproductiveCondition,,
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176
|
resourceID,,
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177
|
resourceRelationshipID,,
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178
|
samplingEffort,,
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179
|
scientificNameID,,
|
|
180
|
startDayOfYear,,
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181
|
subgenus,,
|
|
182
|
taxonConceptID,,
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183
|
taxonID,,
|
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184
|
taxonRank,,
|
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185
|
taxonomicStatus,,
|
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186
|
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
|
|
187
|
verbatimCoordinateSystem,,
|
|
188
|
verbatimCoordinates,,
|
|
189
|
verbatimDepth,,
|
|
190
|
verbatimEventDate,,
|
|
191
|
verbatimSRS,,
|
|
192
|
verbatimTaxonRank,,
|
|
193
|
vernacularName,,
|
|
194
|
waterBody,,
|
|
195
|
year,,
|
