Project

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1
DwC,VegBIEN:,Comments
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occurrenceID,/location/authorlocationcode/_alt/3,
3
institutionCode,/location/authorlocationcode/_alt/4/_merge/1,
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collectionCode,/location/authorlocationcode/_alt/4/_merge/2/_merge/1,
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collectionID,/location/authorlocationcode/_alt/4/_merge/2/_merge/2,
6
catalogNumber,"/location/authorlocationcode/_alt/4/_merge/3/_if[@name=""if indirect voucher""]/else",
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verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
8
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
9
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
10
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
11
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
12
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
13
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
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coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
15
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
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decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
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verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
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decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
20
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
21
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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samplingProtocol,/location/locationevent/*_id/method/name,
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fieldNumber,/location/locationevent/authoreventcode,
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eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1,
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dateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2,
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eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1,
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dateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2,
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dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date,
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individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
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sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
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catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
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collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
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institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
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recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
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scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2,
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establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
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establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
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individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode,
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
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scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
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scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
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infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
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specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
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genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
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family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
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order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
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class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
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phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
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kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
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dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value,
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taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
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identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
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recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
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maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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locality,/location/locationnarrative/_merge/1,
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verbatimLocality,/location/locationnarrative/_merge/2,
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habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
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locationID,/location/sourceaccessioncode,
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acceptedNameUsage,,
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acceptedNameUsageID,,
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associatedMedia,,
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associatedOccurrences,,
74
associatedReferences,,
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associatedSequences,,
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associatedTaxa,,
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basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
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bed,,
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behavior,,
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countryCode,,
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dataGeneralizations,,
82
datasetID,,
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datasetName,,
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day,,Brad: OMIT
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dcterms:accessRights,,
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dcterms:bibliographicCitation,,
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dcterms:language,,
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dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
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dcterms:references,,
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dcterms:rights,,
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dcterms:rightsHolder,,
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dcterms:type,,
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disposition,,
94
dynamicProperties,,
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earliestAgeOrLowestStage,,
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earliestEonOrLowestEonothem,,
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earliestEpochOrLowestSeries,,
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earliestEraOrLowestErathem,,
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earliestPeriodOrLowestSystem,,
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endDayOfYear,,
101
eventID,,
102
eventRemarks,,
103
eventTime,,Brad: OMIT
104
footprintSRS,,
105
footprintSpatialFit,,
106
formation,,
107
geodeticDatum,,
108
geologicalContextID,,
109
georeferenceProtocol,,
110
georeferenceRemarks,,
111
georeferenceSources,,
112
georeferenceVerificationStatus,,
113
georeferencedBy,,
114
georeferencedDate,,
115
group,,
116
higherClassification,,
117
higherGeography,,
118
higherGeographyID,,
119
highestBiostratigraphicZone,,
120
identificationID,,
121
identificationReferences,,
122
identificationRemarks,,
123
identificationVerificationStatus,,
124
informationWithheld,,
125
institutionID,,
126
island,,
127
islandGroup,,
128
latestAgeOrHighestStage,,
129
latestEonOrHighestEonothem,,
130
latestEpochOrHighestSeries,,
131
latestEraOrHighestErathem,,
132
latestPeriodOrHighestSystem,,
133
lifeStage,,
134
lithostratigraphicTerms,,
135
locationAccordingTo,,
136
locationRemarks,,
137
lowestBiostratigraphicZone,,
138
maximumDistanceAboveSurfaceInMeters,,
139
measurementAccuracy,,
140
measurementDeterminedBy,,
141
measurementDeterminedDate,,
142
measurementID,,
143
measurementMethod,,
144
measurementRemarks,,
145
measurementType,,
146
measurementUnit,,
147
measurementValue,,
148
member,,
149
minimumDistanceAboveSurfaceInMeters,,
150
month,,
151
municipality,,
152
nameAccordingTo,,
153
nameAccordingToID,,
154
namePublishedIn,,
155
namePublishedInID,,
156
namePublishedInYear,,
157
nomenclaturalCode,,
158
nomenclaturalStatus,,
159
occurrenceRemarks,,
160
occurrenceStatus,,
161
originalNameUsage,,
162
originalNameUsageID,,
163
otherCatalogNumbers,,
164
ownerInstitutionCode,,
165
parentNameUsage,,
166
parentNameUsageID,,
167
pointRadiusSpatialFit,,
168
preparations,,Brad: OMIT
169
previousIdentifications,,Brad: OMIT
170
relatedResourceID,,Brad: OMIT
171
relationshipAccordingTo,,
172
relationshipEstablishedDate,,
173
relationshipOfResource,,Brad: OMIT
174
relationshipRemarks,,
175
reproductiveCondition,,
176
resourceID,,
177
resourceRelationshipID,,
178
samplingEffort,,
179
scientificNameID,,
180
startDayOfYear,,
181
subgenus,,
182
taxonConceptID,,
183
taxonID,,
184
taxonRank,,
185
taxonomicStatus,,
186
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
187
verbatimCoordinateSystem,,
188
verbatimCoordinates,,
189
verbatimDepth,,
190
verbatimEventDate,,
191
verbatimSRS,,
192
verbatimTaxonRank,,
193
vernacularName,,
194
waterBody,,
195
year,,
(10-10/24)