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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3701 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Added synchronization of back...
  bin 4084 over 12 years Aaron Marcuse-Kubitza intersect: Fixed bug where test for ignore opti...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 4104 over 12 years Aaron Marcuse-Kubitza input.Makefile: Mapping: $(map): Removed no lon...
  lib 4103 over 12 years Aaron Marcuse-Kubitza sql.py: run_query(): Exception handling: Fixed ...
  mappings 4099 over 12 years Aaron Marcuse-Kubitza mappings/: Removed now-inaccurate ".stems" suff...
  schemas 4086 over 12 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 4091 over 12 years Aaron Marcuse-Kubitza to_do/: svn:ignore OpenOffice lock files
Makefile 10.1 KB 3764 over 12 years Aaron Marcuse-Kubitza root Makefile, input.Makefile: Maps validation:...
README.TXT 9 KB 4087 over 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Updated filenames o...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
4104 08/17/2012 06:37 PM Aaron Marcuse-Kubitza

input.Makefile: Mapping: $(map): Removed no longer used test for $(mapEnv)

4103 08/17/2012 05:50 PM Aaron Marcuse-Kubitza

sql.py: run_query(): Exception handling: Fixed bug where PostgreSQL 9.1 PL/Python errors have a different format than PostgreSQL 9.0 which needs to be supported separately. This format was already supported in sql_gen.plpythonu_error_handler, but also needed to be supported for exceptions that propagate back to the client.

4102 08/17/2012 05:34 PM Aaron Marcuse-Kubitza

inputs/SALVIAS-CSV/src/: Removed source files because they shouldn't be under version control. (They are synchronized via `make inputs/download`.)

4101 08/17/2012 05:15 PM Aaron Marcuse-Kubitza

inputs: Moved src files into VegCSV subfolders (https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCSV#CSV-representation), with table suffixes removed, using the steps at <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCSV_subfolders>

4100 08/17/2012 04:26 PM Aaron Marcuse-Kubitza

util.py: dict_subset(): Fall back to using dict when OrderedDict is not available, in order to support making the maps on nimoy

4099 08/17/2012 04:02 PM Aaron Marcuse-Kubitza

mappings/: Removed now-inaccurate ".stems" suffix from VegX-VegCore.stems.csv, which actually applied to all tables

4098 08/17/2012 03:59 PM Aaron Marcuse-Kubitza

mappings/: Removed no longer used ".specimens" suffix from maps, which is now the same for all maps

4097 08/17/2012 03:52 PM Aaron Marcuse-Kubitza

mappings/: Removed no longer used plots, organisms, and stems maps, which were copies of the specimens map

4096 08/17/2012 03:48 PM Aaron Marcuse-Kubitza

input.Makefile: Core maps: Always use the specimens "table", since there are now no longer separate mappings for different tables, and the other tables' maps in mappings/ are merely copies of the specimens table's map

4095 08/17/2012 03:30 PM Aaron Marcuse-Kubitza

input.Makefile: Removed no longer used custom via maps code, so that map files no longer need a prefix (which is always the same) specifying that they map through Veg+. Veg+ thus serves as the single gateway to VegBIEN, which avoids ever again having to maintain two copies of the mappings, as was the case when DwC and VegX XPaths were separate gateways. This will assist in untying the complex mapping logic in input.Makefile from file naming conventions in mappings/, and simplify the task of grouping each map with the CSV it maps.

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