| 1 |
3968
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aaronmk
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SALVIAS,VegBIEN:,Comments
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| 2 |
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plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
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| 3 |
3999
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aaronmk
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SiteCode,/location/authorlocationcode/_alt/1,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
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| 4 |
3984
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aaronmk
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Elev,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.
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| 5 |
3985
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aaronmk
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elev_max_m,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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| 6 |
3984
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aaronmk
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elev_min_m,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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| 7 |
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elev_min_m,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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| 8 |
3985
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aaronmk
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elev_max_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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| 9 |
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elev_min_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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| 10 |
3968
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aaronmk
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LatDec,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
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| 11 |
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LongDec,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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| 12 |
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pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
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| 13 |
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PolDiv1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
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| 14 |
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Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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| 15 |
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MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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| 16 |
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PlotMethod,/location/locationevent/*_id/method/name,
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| 17 |
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project_id,/location/locationevent/*_id/project/projectname,
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| 18 |
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life_zone_code,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
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| 19 |
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life_zone,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
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| 20 |
4016
|
aaronmk
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date_finish,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,
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| 21 |
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date_start,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,
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| 22 |
3968
|
aaronmk
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Precip,/location/locationevent/precipitation,
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| 23 |
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soil_acidity,"/location/locationevent/soilobs/acidity/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",
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| 24 |
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soil_base,"/location/locationevent/soilobs/basesaturation/_units:[default=""%"",to=]/value",
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| 25 |
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soil_Ca,"/location/locationevent/soilobs/calcium/_units:[default=""%"",to=]/value",
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| 26 |
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soil_C,"/location/locationevent/soilobs/carbon/_units:[default=""%"",to=]/value",
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| 27 |
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soil_cation_cap,/location/locationevent/soilobs/cationexchangecapacity,
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| 28 |
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clay_percent,"/location/locationevent/soilobs/clay/_units:[default=""%"",to=]/value",
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| 29 |
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soil_conductivity,/location/locationevent/soilobs/conductivity,
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| 30 |
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soil_Mg,"/location/locationevent/soilobs/magnesium/_units:[default=""%"",to=]/value",
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| 31 |
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soil_N,"/location/locationevent/soilobs/nitrogen/_units:[default=""%"",to=]/value",
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| 32 |
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organic_percent,"/location/locationevent/soilobs/organic/_units:[default=""%"",to=]/value",
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| 33 |
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pH,/location/locationevent/soilobs/ph,"Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
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| 34 |
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soil_P,"/location/locationevent/soilobs/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
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| 35 |
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soil_K,"/location/locationevent/soilobs/potassium/_units:[default=""%"",to=]/value",
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| 36 |
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sand_percent,"/location/locationevent/soilobs/sand/_units:[default=""%"",to=]/value",
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| 37 |
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silt_percent,"/location/locationevent/soilobs/silt/_units:[default=""%"",to=]/value",
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| 38 |
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soil_Na,"/location/locationevent/soilobs/sodium/_units:[default=""%"",to=]/value",
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| 39 |
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soil_texture,"/location/locationevent/soilobs/texture/_units:[default=""%"",to=]/value",
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| 40 |
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Temp,/location/locationevent/temperature,
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| 41 |
3983
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aaronmk
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Locality_Description,/location/locationnarrative/_merge/1,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"
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| 42 |
3968
|
aaronmk
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slope_aspect,/location/slopeaspect/_compass/value,
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| 43 |
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slope_gradient,/location/slopegradient,
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| 44 |
4066
|
aaronmk
|
PlotID,/location/sourceaccessioncode,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
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| 45 |
1740
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aaronmk
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AccessCode,,** No input mapping for AccessCode **
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| 46 |
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ElevSource,,** No input mapping for ElevSource **
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| 47 |
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Habitat,,** No input mapping for Habitat **
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| 48 |
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MethodCode,,** No input mapping for MethodCode **
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| 49 |
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PrecipSource,,** No input mapping for PrecipSource **
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| 50 |
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PrimOwnerID,,** No input mapping for PrimOwnerID **
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| 51 |
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RevisionComments,,** No input mapping for RevisionComments **
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| 52 |
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SiteName,,** No input mapping for SiteName **
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| 53 |
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TempSource,,** No input mapping for TempSource **
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| 54 |
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bearing,,** No input mapping for bearing **
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| 55 |
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lat_long_accuracy,,** No input mapping for lat_long_accuracy **
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| 56 |
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lat_string,,** No input mapping for lat_string **
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| 57 |
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long_string,,** No input mapping for long_string **
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| 58 |
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new_world,,** No input mapping for new_world **
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| 59 |
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orig_filename,,** No input mapping for orig_filename **
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| 60 |
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plot_administrator,,** No input mapping for plot_administrator **
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| 61 |
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plot_notes,,** No input mapping for plot_notes **
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| 62 |
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pol1_type,,** No input mapping for pol1_type **
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| 63 |
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pol2_type,,** No input mapping for pol2_type **
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| 64 |
727
|
aaronmk
|
recensused,,"Brad: This is a 0/1 value, internal to SALVIAS. 1 indicates that a plot has >1 set of values, from different census events.; Aaron: Different censuses are distinguished in organisms data by different census_no values"
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| 65 |
1740
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aaronmk
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tmp_del,,** No input mapping for tmp_del **
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| 66 |
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topography_desc,,** No input mapping for topography_desc **
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| 67 |
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vegetation_1,,** No input mapping for vegetation_1 **
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| 68 |
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vegetation_2,,** No input mapping for vegetation_2 **
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