Revision 4120
Added by Aaron Marcuse-Kubitza over 12 years ago
inputs/MT/test/import.specimens.xml.ref | ||
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Put template: |
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<VegBIEN> |
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<location id="-1"> |
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<authorlocationcode> |
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<_alt> |
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<3>$id</3> |
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<4> |
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<_merge> |
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<1>$institutionCode</1> |
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<2> |
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<_merge> |
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<1>$collectionCode</1> |
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<2>$collectionID</2> |
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</_merge> |
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</2> |
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</_merge> |
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</4> |
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</_alt> |
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</authorlocationcode> |
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<locationdetermination> |
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<namedplace_id> |
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<_simplifyPath> |
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<next>parent_id/namedplace</next> |
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<require>placename</require> |
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<path> |
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<namedplace> |
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<rank>county</rank> |
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<parent_id> |
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<namedplace> |
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<rank>stateProvince</rank> |
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<parent_id> |
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<namedplace> |
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<rank>country</rank> |
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<parent_id> |
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<namedplace> |
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<rank>continent</rank> |
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<placename>$continent</placename> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</path> |
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</_simplifyPath> |
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</namedplace_id> |
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</locationdetermination> |
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<locationevent> |
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<count>$individualCount</count> |
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<plantobservation> |
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<specimenreplicate> |
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<collectioncode_dwc> |
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<_merge> |
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<1>$collectionCode</1> |
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<2>$collectionID</2> |
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</_merge> |
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</collectioncode_dwc> |
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<institution_id><party><organizationname>$institutionCode</organizationname></party></institution_id> |
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<sourceaccessioncode>$id</sourceaccessioncode> |
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</specimenreplicate> |
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</plantobservation> |
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</aggregateoccurrence> |
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<iscultivated> |
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<_map> |
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<cultivated>t</cultivated> |
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<wild>f</wild> |
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<*></*> |
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<value>$establishmentMeans</value> |
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</_map> |
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</iscultivated> |
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<isnative> |
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<_map> |
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<native>t</native> |
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<exotic>f</exotic> |
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<*></*> |
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<value>$establishmentMeans</value> |
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</_map> |
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</isnative> |
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<taxondetermination> |
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<isoriginal>true</isoriginal> |
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<role>identifier</role> |
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<plantconcept_id> |
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<plantconcept> |
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<plantname_id> |
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<_simplifyPath> |
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<next>parent_id/plantname</next> |
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<require>plantname</require> |
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<path> |
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<plantname> |
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<rank>binomial</rank> |
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<parent_id> |
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<plantname> |
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<rank>authority</rank> |
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<parent_id> |
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<plantname> |
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<rank>subspecies</rank> |
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<parent_id> |
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<plantname> |
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<rank>species</rank> |
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<parent_id> |
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<plantname> |
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<rank>genus</rank> |
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<plantname>$genus</plantname> |
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<parent_id> |
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<plantname> |
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<rank>family</rank> |
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<plantname>$family</plantname> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</path> |
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</_simplifyPath> |
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</plantname_id> |
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</plantconcept> |
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</plantconcept_id> |
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</taxondetermination> |
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</taxonoccurrence> |
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</locationevent> |
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<locationnarrative>$locality</locationnarrative> |
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</location> |
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</VegBIEN> |
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Inserted 22 new rows into database |
inputs/XAL/test/import.specimens.xml.ref | ||
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1 |
Put template: |
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<VegBIEN> |
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<location id="-1"> |
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<authorlocationcode> |
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<_merge> |
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<1>$InstitutionCode</1> |
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<2>$CollectionCode</2> |
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<3>$CatalogNumber</3> |
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</_merge> |
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</authorlocationcode> |
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<elevation> |
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<_avg> |
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<max> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$MaximumElevation</value> |
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</_replace> |
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</value> |
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</_units> |
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</max> |
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<min> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_rangeStart> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$MinimumElevation</value> |
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</_replace> |
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</value> |
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</_rangeStart> |
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</value> |
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</_units> |
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</min> |
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</_avg> |
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</elevation> |
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<elevationrange> |
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<_range> |
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<from> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_rangeStart> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$MinimumElevation</value> |
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</_replace> |
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</value> |
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</_rangeStart> |
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</value> |
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</_units> |
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</from> |
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<to> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_alt> |
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<1> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$MaximumElevation</value> |
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</_replace> |
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</1> |
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<2> |
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<_rangeEnd> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$MinimumElevation</value> |
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</_replace> |
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</value> |
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</_rangeEnd> |
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</2> |
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</_alt> |
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</value> |
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</_units> |
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</to> |
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</_range> |
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</elevationrange> |
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<locationdetermination> |
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<coordsaccuracy><_noCV><value>$CoordinatePrecision</value></_noCV></coordsaccuracy> |
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<latitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$Latitude</value> |
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</_nullIf> |
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</latitude> |
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<longitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$Longitude</value> |
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</_nullIf> |
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</longitude> |
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<namedplace_id> |
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<_simplifyPath> |
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<next>parent_id/namedplace</next> |
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<require>placename</require> |
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<path> |
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<namedplace> |
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<rank>county</rank> |
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<placename>$County</placename> |
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<parent_id> |
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<namedplace> |
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<rank>stateProvince</rank> |
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<placename>$StateProvince</placename> |
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<parent_id> |
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<namedplace> |
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<rank>country</rank> |
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<placename>$Country</placename> |
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<parent_id> |
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<namedplace> |
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<rank>continent</rank> |
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<placename>$ContinentOcean</placename> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</path> |
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</_simplifyPath> |
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</namedplace_id> |
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</locationdetermination> |
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<locationevent> |
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<obsenddate> |
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<_date> |
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<date> |
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<_dateRangeEnd> |
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<value> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DayCollected</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MonthCollected</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$YearCollected</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</value> |
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</_dateRangeEnd> |
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</date> |
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</_date> |
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</obsenddate> |
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<obsstartdate> |
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<_date> |
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<date> |
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<_dateRangeStart> |
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<value> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DayCollected</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MonthCollected</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$YearCollected</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</value> |
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</_dateRangeStart> |
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</date> |
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</_date> |
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</obsstartdate> |
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<collectiondate> |
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<_date> |
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<date> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DayCollected</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MonthCollected</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$YearCollected</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</date> |
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</_date> |
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</collectiondate> |
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<count>$IndividualCount</count> |
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<notes>$Notes</notes> |
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<plantobservation> |
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241 |
<collectionnumber> |
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<_alt> |
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243 |
<1>$CollectorNumber</1> |
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<2>$FieldNumber</2> |
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</_alt> |
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</collectionnumber> |
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<definedvalue fkey="tablerecord_id"> |
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248 |
<userdefined_id> |
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249 |
<userdefined> |
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<tablename>plantobservation</tablename> |
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251 |
<userdefinedname>sex</userdefinedname> |
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</userdefined> |
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</userdefined_id> |
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<definedvalue>$Sex</definedvalue> |
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</definedvalue> |
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<specimenreplicate> |
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<catalognumber_dwc>$CatalogNumber</catalognumber_dwc> |
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<collectioncode_dwc>$CollectionCode</collectioncode_dwc> |
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<institution_id><party><organizationname>$InstitutionCode</organizationname></party></institution_id> |
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</specimenreplicate> |
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</plantobservation> |
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</aggregateoccurrence> |
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263 |
<authortaxoncode> |
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264 |
<_alt> |
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<1> |
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266 |
<_alt> |
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267 |
<1>$CollectorNumber</1> |
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<2>$FieldNumber</2> |
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</_alt> |
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</1> |
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271 |
<2>$ScientificName</2> |
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</_alt> |
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273 |
</authortaxoncode> |
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274 |
<taxondetermination> |
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<isoriginal>true</isoriginal> |
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<role>identifier</role> |
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277 |
<party_id> |
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278 |
<party> |
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279 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
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280 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
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281 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
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282 |
</party> |
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283 |
</party_id> |
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284 |
<plantconcept_id> |
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285 |
<plantconcept> |
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286 |
<plantname_id> |
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287 |
<_simplifyPath> |
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288 |
<next>parent_id/plantname</next> |
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289 |
<require>plantname</require> |
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290 |
<path> |
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291 |
<plantname> |
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292 |
<rank>binomial</rank> |
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293 |
<plantname>$ScientificName</plantname> |
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294 |
<parent_id> |
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295 |
<plantname> |
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296 |
<rank>authority</rank> |
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297 |
<plantname>$ScientificNameAuthor</plantname> |
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298 |
<parent_id> |
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299 |
<plantname> |
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300 |
<rank>subspecies</rank> |
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301 |
<plantname>$Subspecies</plantname> |
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302 |
<parent_id> |
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303 |
<plantname> |
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304 |
<rank>species</rank> |
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305 |
<plantname>$Species</plantname> |
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306 |
<parent_id> |
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307 |
<plantname> |
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308 |
<rank>genus</rank> |
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309 |
<plantname>$Genus</plantname> |
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310 |
<parent_id> |
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311 |
<plantname> |
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312 |
<rank>family</rank> |
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313 |
<plantname>$Family</plantname> |
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314 |
<parent_id> |
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315 |
<plantname> |
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316 |
<rank>order</rank> |
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317 |
<plantname>$Order</plantname> |
|
318 |
<parent_id> |
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319 |
<plantname> |
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320 |
<rank>class</rank> |
|
321 |
<plantname>$Class</plantname> |
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322 |
<parent_id> |
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323 |
<plantname> |
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324 |
<rank>subkingdom</rank> |
|
325 |
<plantname>$Phylum</plantname> |
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326 |
<parent_id> |
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327 |
<plantname> |
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328 |
<rank>kingdom</rank> |
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329 |
<plantname>$Kingdom</plantname> |
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330 |
</plantname> |
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331 |
</parent_id> |
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332 |
</plantname> |
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333 |
</parent_id> |
|
334 |
</plantname> |
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335 |
</parent_id> |
|
336 |
</plantname> |
|
337 |
</parent_id> |
|
338 |
</plantname> |
|
339 |
</parent_id> |
|
340 |
</plantname> |
|
341 |
</parent_id> |
|
342 |
</plantname> |
|
343 |
</parent_id> |
|
344 |
</plantname> |
|
345 |
</parent_id> |
|
346 |
</plantname> |
|
347 |
</parent_id> |
|
348 |
</plantname> |
|
349 |
</path> |
|
350 |
</_simplifyPath> |
|
351 |
</plantname_id> |
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352 |
</plantconcept> |
|
353 |
</plantconcept_id> |
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354 |
<determinationdate> |
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355 |
<_date> |
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356 |
<date> |
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357 |
<_dateRangeStart> |
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358 |
<value> |
|
359 |
<_date> |
|
360 |
<day> |
|
361 |
<_nullIf> |
|
362 |
<null>0</null> |
|
363 |
<type>float</type> |
|
364 |
<value>$DayIdentified</value> |
|
365 |
</_nullIf> |
|
366 |
</day> |
|
367 |
<month> |
|
368 |
<_nullIf> |
|
369 |
<null>0</null> |
|
370 |
<type>float</type> |
|
371 |
<value>$MonthIdentified</value> |
|
372 |
</_nullIf> |
|
373 |
</month> |
|
374 |
<year> |
|
375 |
<_nullIf> |
|
376 |
<null>0</null> |
|
377 |
<type>float</type> |
|
378 |
<value>$YearIdentified</value> |
|
379 |
</_nullIf> |
|
380 |
</year> |
|
381 |
</_date> |
|
382 |
</value> |
|
383 |
</_dateRangeStart> |
|
384 |
</date> |
|
385 |
</_date> |
|
386 |
</determinationdate> |
|
387 |
</taxondetermination> |
|
388 |
<verbatimcollectorname>$Collector</verbatimcollectorname> |
|
389 |
<voucher><specimenreplicate_id><specimenreplicate><catalognumber_dwc/></specimenreplicate></specimenreplicate_id></voucher> |
|
390 |
</taxonoccurrence> |
|
391 |
<waterdepth> |
|
392 |
<_avg> |
|
393 |
<max> |
|
394 |
<_units> |
|
395 |
<default>m</default> |
|
396 |
<to>m</to> |
|
397 |
<to></to> |
|
398 |
<value> |
|
399 |
<_replace> |
|
400 |
<\bca\.?></\bca\.?> |
|
401 |
<value>$MaximumDepth</value> |
|
402 |
</_replace> |
|
403 |
</value> |
|
404 |
</_units> |
|
405 |
</max> |
|
406 |
<min> |
|
407 |
<_units> |
|
408 |
<default>m</default> |
|
409 |
<to>m</to> |
|
410 |
<to></to> |
|
411 |
<value> |
|
412 |
<_replace> |
|
413 |
<\bca\.?></\bca\.?> |
|
414 |
<value>$MinimumDepth</value> |
|
415 |
</_replace> |
|
416 |
</value> |
|
417 |
</_units> |
|
418 |
</min> |
|
419 |
</_avg> |
|
420 |
</waterdepth> |
|
421 |
</locationevent> |
|
422 |
<locationnarrative>$Locality</locationnarrative> |
|
423 |
</location> |
|
424 |
</VegBIEN> |
|
425 |
Inserted 47 new rows into database |
inputs/NY/test/import.specimens.xml.ref | ||
---|---|---|
1 |
Put template: |
|
2 |
<VegBIEN> |
|
3 |
<location id="-1"> |
|
4 |
<authorlocationcode> |
|
5 |
<_alt> |
|
6 |
<3>$UniqueNYInternalRecordNumber</3> |
|
7 |
<4> |
|
8 |
<_merge> |
|
9 |
<1>$InstitutionCode</1> |
|
10 |
<2>$CollectionCode</2> |
|
11 |
<3>$CatalogNumber</3> |
|
12 |
</_merge> |
|
13 |
</4> |
|
14 |
</_alt> |
|
15 |
</authorlocationcode> |
|
16 |
<elevation> |
|
17 |
<_avg> |
|
18 |
<max> |
|
19 |
<_units> |
|
20 |
<default>m</default> |
|
21 |
<to>m</to> |
|
22 |
<to></to> |
|
23 |
<value> |
|
24 |
<_replace> |
|
25 |
<\bca\.?></\bca\.?> |
|
26 |
<value>$MaximumElevation</value> |
|
27 |
</_replace> |
|
28 |
</value> |
|
29 |
</_units> |
|
30 |
</max> |
|
31 |
<min> |
|
32 |
<_units> |
|
33 |
<default>m</default> |
|
34 |
<to>m</to> |
|
35 |
<to></to> |
|
36 |
<value> |
|
37 |
<_rangeStart> |
|
38 |
<value> |
|
39 |
<_replace> |
|
40 |
<\bca\.?></\bca\.?> |
|
41 |
<value> |
|
42 |
<_nullIf> |
|
43 |
<null>.</null> |
|
44 |
<value>$MinimumElevation</value> |
|
45 |
</_nullIf> |
|
46 |
</value> |
|
47 |
</_replace> |
|
48 |
</value> |
|
49 |
</_rangeStart> |
|
50 |
</value> |
|
51 |
</_units> |
|
52 |
</min> |
|
53 |
</_avg> |
|
54 |
</elevation> |
|
55 |
<elevationrange> |
|
56 |
<_range> |
|
57 |
<from> |
|
58 |
<_units> |
|
59 |
<default>m</default> |
|
60 |
<to>m</to> |
|
61 |
<to></to> |
|
62 |
<value> |
|
63 |
<_rangeStart> |
|
64 |
<value> |
|
65 |
<_replace> |
|
66 |
<\bca\.?></\bca\.?> |
|
67 |
<value> |
|
68 |
<_nullIf> |
|
69 |
<null>.</null> |
|
70 |
<value>$MinimumElevation</value> |
|
71 |
</_nullIf> |
|
72 |
</value> |
|
73 |
</_replace> |
|
74 |
</value> |
|
75 |
</_rangeStart> |
|
76 |
</value> |
|
77 |
</_units> |
|
78 |
</from> |
|
79 |
<to> |
|
80 |
<_units> |
|
81 |
<default>m</default> |
|
82 |
<to>m</to> |
|
83 |
<to></to> |
|
84 |
<value> |
|
85 |
<_alt> |
|
86 |
<1> |
|
87 |
<_replace> |
|
88 |
<\bca\.?></\bca\.?> |
|
89 |
<value>$MaximumElevation</value> |
|
90 |
</_replace> |
|
91 |
</1> |
|
92 |
<2> |
|
93 |
<_rangeEnd> |
|
94 |
<value> |
|
95 |
<_replace> |
|
96 |
<\bca\.?></\bca\.?> |
|
97 |
<value> |
|
98 |
<_nullIf> |
|
99 |
<null>.</null> |
|
100 |
<value>$MinimumElevation</value> |
|
101 |
</_nullIf> |
|
102 |
</value> |
|
103 |
</_replace> |
|
104 |
</value> |
|
105 |
</_rangeEnd> |
|
106 |
</2> |
|
107 |
</_alt> |
|
108 |
</value> |
|
109 |
</_units> |
|
110 |
</to> |
|
111 |
</_range> |
|
112 |
</elevationrange> |
|
113 |
<locationdetermination> |
|
114 |
<coordsaccuracy><_noCV><value>$CoordinatePrecision</value></_noCV></coordsaccuracy> |
|
115 |
<footprintgeometry_dwc>$BoundingBox</footprintgeometry_dwc> |
|
116 |
<latitude> |
|
117 |
<_nullIf> |
|
118 |
<null>0</null> |
|
119 |
<type>float</type> |
|
120 |
<value>$Latitude</value> |
|
121 |
</_nullIf> |
|
122 |
</latitude> |
|
123 |
<longitude> |
|
124 |
<_nullIf> |
|
125 |
<null>0</null> |
|
126 |
<type>float</type> |
|
127 |
<value>$Longitude</value> |
|
128 |
</_nullIf> |
|
129 |
</longitude> |
|
130 |
<namedplace_id> |
|
131 |
<_simplifyPath> |
|
132 |
<next>parent_id/namedplace</next> |
|
133 |
<require>placename</require> |
|
134 |
<path> |
|
135 |
<namedplace> |
|
136 |
<rank>county</rank> |
|
137 |
<placename>$County</placename> |
|
138 |
<parent_id> |
|
139 |
<namedplace> |
|
140 |
<rank>stateProvince</rank> |
|
141 |
<placename>$StateProvince</placename> |
|
142 |
<parent_id> |
|
143 |
<namedplace> |
|
144 |
<rank>country</rank> |
|
145 |
<placename>$Country</placename> |
|
146 |
<parent_id> |
|
147 |
<namedplace> |
|
148 |
<rank>continent</rank> |
|
149 |
<placename>$ContinentOcean</placename> |
|
150 |
</namedplace> |
|
151 |
</parent_id> |
|
152 |
</namedplace> |
|
153 |
</parent_id> |
|
154 |
</namedplace> |
|
155 |
</parent_id> |
|
156 |
</namedplace> |
|
157 |
</path> |
|
158 |
</_simplifyPath> |
|
159 |
</namedplace_id> |
|
160 |
</locationdetermination> |
|
161 |
<locationevent> |
|
162 |
<obsenddate> |
|
163 |
<_date> |
|
164 |
<date> |
|
165 |
<_dateRangeEnd> |
|
166 |
<value> |
|
167 |
<_date> |
|
168 |
<day> |
|
169 |
<_nullIf> |
|
170 |
<null>0</null> |
|
171 |
<type>float</type> |
|
172 |
<value>$DayCollected</value> |
|
173 |
</_nullIf> |
|
174 |
</day> |
|
175 |
<month> |
|
176 |
<_nullIf> |
|
177 |
<null>0</null> |
|
178 |
<type>float</type> |
|
179 |
<value>$MonthCollected</value> |
|
180 |
</_nullIf> |
|
181 |
</month> |
|
182 |
<year> |
|
183 |
<_nullIf> |
|
184 |
<null>0</null> |
|
185 |
<type>float</type> |
|
186 |
<value>$YearCollected</value> |
|
187 |
</_nullIf> |
|
188 |
</year> |
|
189 |
</_date> |
|
190 |
</value> |
|
191 |
</_dateRangeEnd> |
|
192 |
</date> |
|
193 |
</_date> |
|
194 |
</obsenddate> |
|
195 |
<obsstartdate> |
|
196 |
<_date> |
|
197 |
<date> |
|
198 |
<_dateRangeStart> |
|
199 |
<value> |
|
200 |
<_date> |
|
201 |
<day> |
|
202 |
<_nullIf> |
|
203 |
<null>0</null> |
|
204 |
<type>float</type> |
|
205 |
<value>$DayCollected</value> |
|
206 |
</_nullIf> |
|
207 |
</day> |
|
208 |
<month> |
|
209 |
<_nullIf> |
|
210 |
<null>0</null> |
|
211 |
<type>float</type> |
|
212 |
<value>$MonthCollected</value> |
|
213 |
</_nullIf> |
|
214 |
</month> |
|
215 |
<year> |
|
216 |
<_nullIf> |
|
217 |
<null>0</null> |
|
218 |
<type>float</type> |
|
219 |
<value>$YearCollected</value> |
|
220 |
</_nullIf> |
|
221 |
</year> |
|
222 |
</_date> |
|
223 |
</value> |
|
224 |
</_dateRangeStart> |
|
225 |
</date> |
|
226 |
</_date> |
|
227 |
</obsstartdate> |
|
228 |
<taxonoccurrence> |
|
229 |
<aggregateoccurrence> |
|
230 |
<collectiondate> |
|
231 |
<_date> |
|
232 |
<date> |
|
233 |
<_date> |
|
234 |
<day> |
|
235 |
<_nullIf> |
|
236 |
<null>0</null> |
|
237 |
<type>float</type> |
|
238 |
<value>$DayCollected</value> |
|
239 |
</_nullIf> |
|
240 |
</day> |
|
241 |
<month> |
|
242 |
<_nullIf> |
|
243 |
<null>0</null> |
|
244 |
<type>float</type> |
|
245 |
<value>$MonthCollected</value> |
|
246 |
</_nullIf> |
|
247 |
</month> |
|
248 |
<year> |
|
249 |
<_nullIf> |
|
250 |
<null>0</null> |
|
251 |
<type>float</type> |
|
252 |
<value>$YearCollected</value> |
|
253 |
</_nullIf> |
|
254 |
</year> |
|
255 |
</_date> |
|
256 |
</date> |
|
257 |
</_date> |
|
258 |
</collectiondate> |
|
259 |
<count>$IndividualCount</count> |
|
260 |
<notes> |
|
261 |
<_merge> |
|
262 |
<1>$Notes</1> |
|
263 |
<2> |
|
264 |
<_label> |
|
265 |
<label>plant fungus</label> |
|
266 |
<value>$PlantFungusDescription</value> |
|
267 |
</_label> |
|
268 |
</2> |
|
269 |
</_merge> |
|
270 |
</notes> |
|
271 |
<plantobservation> |
|
272 |
<collectionnumber> |
|
273 |
<_alt> |
|
274 |
<1>$CollectorNumber</1> |
|
275 |
<2>$FieldNumber</2> |
|
276 |
</_alt> |
|
277 |
</collectionnumber> |
|
278 |
<definedvalue fkey="tablerecord_id"> |
|
279 |
<userdefined_id> |
|
280 |
<userdefined> |
|
281 |
<tablename>plantobservation</tablename> |
|
282 |
<userdefinedname>sex</userdefinedname> |
|
283 |
</userdefined> |
|
284 |
</userdefined_id> |
|
285 |
<definedvalue>$Sex</definedvalue> |
|
286 |
</definedvalue> |
|
287 |
<specimenreplicate> |
|
288 |
<catalognumber_dwc>$CatalogNumber</catalognumber_dwc> |
|
289 |
<collectioncode_dwc>$CollectionCode</collectioncode_dwc> |
|
290 |
<institution_id><party><organizationname>$InstitutionCode</organizationname></party></institution_id> |
|
291 |
<sourceaccessioncode>$UniqueNYInternalRecordNumber</sourceaccessioncode> |
|
292 |
</specimenreplicate> |
|
293 |
</plantobservation> |
|
294 |
</aggregateoccurrence> |
|
295 |
<authortaxoncode> |
|
296 |
<_alt> |
|
297 |
<1> |
|
298 |
<_alt> |
|
299 |
<1>$CollectorNumber</1> |
|
300 |
<2>$FieldNumber</2> |
|
301 |
</_alt> |
|
302 |
</1> |
|
303 |
<2>$ScientificName</2> |
|
304 |
</_alt> |
|
305 |
</authortaxoncode> |
|
306 |
<taxondetermination> |
|
307 |
<isoriginal>true</isoriginal> |
|
308 |
<role>identifier</role> |
|
309 |
<party_id> |
|
310 |
<party> |
|
311 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
|
312 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
|
313 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
|
314 |
</party> |
|
315 |
</party_id> |
|
316 |
<plantconcept_id> |
|
317 |
<plantconcept> |
|
318 |
<plantname_id> |
|
319 |
<_simplifyPath> |
|
320 |
<next>parent_id/plantname</next> |
|
321 |
<require>plantname</require> |
|
322 |
<path> |
|
323 |
<plantname> |
|
324 |
<rank>binomial</rank> |
|
325 |
<plantname>$ScientificName</plantname> |
|
326 |
<parent_id> |
|
327 |
<plantname> |
|
328 |
<rank>authority</rank> |
|
329 |
<plantname>$ScientificNameAuthor</plantname> |
|
330 |
<parent_id> |
|
331 |
<plantname> |
|
332 |
<rank>subspecies</rank> |
|
333 |
<plantname>$Subspecies</plantname> |
|
334 |
<parent_id> |
|
335 |
<plantname> |
|
336 |
<rank>species</rank> |
|
337 |
<plantname>$Species</plantname> |
|
338 |
<parent_id> |
|
339 |
<plantname> |
|
340 |
<rank>genus</rank> |
|
341 |
<plantname>$Genus</plantname> |
|
342 |
<parent_id> |
|
343 |
<plantname> |
|
344 |
<rank>family</rank> |
|
345 |
<plantname>$Family</plantname> |
|
346 |
<parent_id> |
|
347 |
<plantname> |
|
348 |
<rank>order</rank> |
|
349 |
<plantname>$Order</plantname> |
|
350 |
<parent_id> |
|
351 |
<plantname> |
|
352 |
<rank>class</rank> |
|
353 |
<plantname>$Class</plantname> |
|
354 |
<parent_id> |
|
355 |
<plantname> |
|
356 |
<rank>subkingdom</rank> |
|
357 |
<plantname>$Phylum</plantname> |
|
358 |
<parent_id> |
|
359 |
<plantname> |
|
360 |
<rank>kingdom</rank> |
|
361 |
<plantname>$Kingdom</plantname> |
|
362 |
</plantname> |
|
363 |
</parent_id> |
|
364 |
</plantname> |
|
365 |
</parent_id> |
|
366 |
</plantname> |
|
367 |
</parent_id> |
|
368 |
</plantname> |
|
369 |
</parent_id> |
|
370 |
</plantname> |
|
371 |
</parent_id> |
|
372 |
</plantname> |
|
373 |
</parent_id> |
|
374 |
</plantname> |
|
375 |
</parent_id> |
|
376 |
</plantname> |
|
377 |
</parent_id> |
|
378 |
</plantname> |
|
379 |
</parent_id> |
|
380 |
</plantname> |
|
381 |
</path> |
|
382 |
</_simplifyPath> |
|
383 |
</plantname_id> |
|
384 |
</plantconcept> |
|
385 |
</plantconcept_id> |
|
386 |
<determinationdate> |
|
387 |
<_date> |
|
388 |
<date> |
|
389 |
<_dateRangeStart> |
|
390 |
<value> |
|
391 |
<_date> |
|
392 |
<day> |
|
393 |
<_nullIf> |
|
394 |
<null>0</null> |
|
395 |
<type>float</type> |
|
396 |
<value>$DayIdentified</value> |
|
397 |
</_nullIf> |
|
398 |
</day> |
|
399 |
<month> |
|
400 |
<_nullIf> |
|
401 |
<null>0</null> |
|
402 |
<type>float</type> |
|
403 |
<value>$MonthIdentified</value> |
|
404 |
</_nullIf> |
|
405 |
</month> |
|
406 |
<year> |
|
407 |
<_nullIf> |
|
408 |
<null>0</null> |
|
409 |
<type>float</type> |
|
410 |
<value>$YearIdentified</value> |
|
411 |
</_nullIf> |
|
412 |
</year> |
|
413 |
</_date> |
|
414 |
</value> |
|
415 |
</_dateRangeStart> |
|
416 |
</date> |
|
417 |
</_date> |
|
418 |
</determinationdate> |
|
419 |
</taxondetermination> |
|
420 |
<verbatimcollectorname>$Collector</verbatimcollectorname> |
|
421 |
<voucher><specimenreplicate_id><specimenreplicate><catalognumber_dwc/></specimenreplicate></specimenreplicate_id></voucher> |
|
422 |
</taxonoccurrence> |
|
423 |
<waterdepth> |
|
424 |
<_avg> |
|
425 |
<max> |
|
426 |
<_units> |
|
427 |
<default>m</default> |
|
428 |
<to>m</to> |
|
429 |
<to></to> |
|
430 |
<value> |
|
431 |
<_replace> |
|
432 |
<\bca\.?></\bca\.?> |
|
433 |
<value>$MaximumDepth</value> |
|
434 |
</_replace> |
|
435 |
</value> |
|
436 |
</_units> |
|
437 |
</max> |
|
438 |
<min> |
|
439 |
<_units> |
|
440 |
<default>m</default> |
|
441 |
<to>m</to> |
|
442 |
<to></to> |
|
443 |
<value> |
|
444 |
<_replace> |
|
445 |
<\bca\.?></\bca\.?> |
|
446 |
<value>$MinimumDepth</value> |
|
447 |
</_replace> |
|
448 |
</value> |
|
449 |
</_units> |
|
450 |
</min> |
|
451 |
</_avg> |
|
452 |
</waterdepth> |
|
453 |
</locationevent> |
|
454 |
<locationnarrative> |
|
455 |
<_merge> |
|
456 |
<1> |
|
457 |
<_merge> |
|
458 |
<1>$Locality</1> |
|
459 |
<2> |
|
460 |
<_label> |
|
461 |
<label>substrate</label> |
|
462 |
<value>$Substrate</value> |
|
463 |
</_label> |
|
464 |
</2> |
|
465 |
<3> |
|
466 |
<_label> |
|
467 |
<label>vegetation</label> |
|
468 |
<value>$Vegetation</value> |
|
469 |
</_label> |
|
470 |
</3> |
|
471 |
</_merge> |
|
472 |
</1> |
|
473 |
<3> |
|
474 |
<_label> |
|
475 |
<label>habitat</label> |
|
476 |
<value>$Habitat</value> |
|
477 |
</_label> |
|
478 |
</3> |
|
479 |
</_merge> |
|
480 |
</locationnarrative> |
|
481 |
</location> |
|
482 |
</VegBIEN> |
|
483 |
Inserted 39 new rows into database |
inputs/Madidi/test/import.0.plots.xml.ref | ||
---|---|---|
1 |
Put template: |
|
2 |
<VegBIEN> |
|
3 |
<location id="-1"> |
|
4 |
<area>$Area</area> |
|
5 |
<authorlocationcode>$Inventory name</authorlocationcode> |
|
6 |
<elevation> |
|
7 |
<_alt> |
|
8 |
<1> |
|
9 |
<_replace> |
|
10 |
<\bca\.?></\bca\.?> |
|
11 |
<value>$Altitude</value> |
|
12 |
</_replace> |
|
13 |
</1> |
|
14 |
<2> |
|
15 |
<_avg> |
|
16 |
<min> |
|
17 |
<_units> |
|
18 |
<default>m</default> |
|
19 |
<to>m</to> |
|
20 |
<to></to> |
|
21 |
<value> |
|
22 |
<_rangeStart> |
|
23 |
<value> |
|
24 |
<_replace> |
|
25 |
<\bca\.?></\bca\.?> |
|
26 |
<value>$Minimum altitude</value> |
|
27 |
</_replace> |
|
28 |
</value> |
|
29 |
</_rangeStart> |
|
30 |
</value> |
|
31 |
</_units> |
|
32 |
</min> |
|
33 |
</_avg> |
|
34 |
</2> |
|
35 |
</_alt> |
|
36 |
</elevation> |
|
37 |
<elevationrange> |
|
38 |
<_range> |
|
39 |
<from> |
|
40 |
<_units> |
|
41 |
<default>m</default> |
|
42 |
<to>m</to> |
|
43 |
<to></to> |
|
44 |
<value> |
|
45 |
<_rangeStart> |
|
46 |
<value> |
|
47 |
<_replace> |
|
48 |
<\bca\.?></\bca\.?> |
|
49 |
<value>$Minimum altitude</value> |
|
50 |
</_replace> |
|
51 |
</value> |
|
52 |
</_rangeStart> |
|
53 |
</value> |
|
54 |
</_units> |
|
55 |
</from> |
|
56 |
<to> |
|
57 |
<_units> |
|
58 |
<default>m</default> |
|
59 |
<to>m</to> |
|
60 |
<to></to> |
|
61 |
<value> |
|
62 |
<_rangeEnd> |
|
63 |
<value> |
|
64 |
<_replace> |
|
65 |
<\bca\.?></\bca\.?> |
|
66 |
<value>$Minimum altitude</value> |
|
67 |
</_replace> |
|
68 |
</value> |
|
69 |
</_rangeEnd> |
|
70 |
</value> |
|
71 |
</_units> |
|
72 |
</to> |
|
73 |
</_range> |
|
74 |
</elevationrange> |
|
75 |
<landform>$Topographical situation</landform> |
|
76 |
<locationdetermination> |
|
77 |
<latitude> |
|
78 |
<_nullIf> |
|
79 |
<null>0</null> |
|
80 |
<type>float</type> |
|
81 |
<value> |
|
82 |
<_alt> |
|
83 |
<1>$Latitude</1> |
|
84 |
<2>$Latitude (DMS)</2> |
|
85 |
</_alt> |
|
86 |
</value> |
|
87 |
</_nullIf> |
|
88 |
</latitude> |
|
89 |
<longitude> |
|
90 |
<_nullIf> |
|
91 |
<null>0</null> |
|
92 |
<type>float</type> |
|
93 |
<value> |
|
94 |
<_alt> |
|
95 |
<1>$Longitude</1> |
|
96 |
<2>$Longitude (DMS)</2> |
|
97 |
</_alt> |
|
98 |
</value> |
|
99 |
</_nullIf> |
|
100 |
</longitude> |
|
101 |
</locationdetermination> |
|
102 |
<locationevent> |
|
103 |
<project_id> |
|
104 |
<project> |
|
105 |
<projectname>$Expedition name</projectname> |
|
106 |
<sourceaccessioncode>$Expedition number</sourceaccessioncode> |
|
107 |
</project> |
|
108 |
</project_id> |
|
109 |
<commclass> |
|
110 |
<commdetermination> |
|
111 |
<commconcept_id> |
|
112 |
<commconcept> |
|
113 |
<commname_id><commname><commname>$Vegetation type</commname></commname></commname_id> |
|
114 |
<commdescription>$Locality description</commdescription> |
|
115 |
</commconcept> |
|
116 |
</commconcept_id> |
|
117 |
</commdetermination> |
|
118 |
</commclass> |
|
119 |
<obsstartdate><_date><date><_dateRangeStart><value>$First evaluation</value></_dateRangeStart></date></_date></obsstartdate> |
|
120 |
<soilobs> |
|
121 |
<acidity>$Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05)</acidity> |
|
122 |
<calcium>$Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)</calcium> |
|
123 |
<carbon>$Carbón Orgánico (WSP S-9,10–%–0.06)</carbon> |
|
124 |
<cationexchangecapacity>$CIC (ISRIC 11–cmolc/Kg–0.05)</cationexchangecapacity> |
|
125 |
<clay>$Arcilla (DIN 18 123–%–1)</clay> |
|
126 |
<conductivity>$Conductividad electrica (ASPT 6–µS/cm– 1 - 10000)</conductivity> |
|
127 |
<magnesium>$Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)</magnesium> |
|
128 |
<nitrogen>$Nitrógeno total (ISRIC 6–%–0.0014)</nitrogen> |
|
129 |
<organic>$Materia Orgánica (WSP S-9,10–%–0.1)</organic> |
|
130 |
<ph>$pH acuoso (ISRIC 4–– 1 - 14)</ph> |
|
131 |
<phosphorus>$Fósforo disponible (ISRIC 14-2–mg/Kg–1.5)</phosphorus> |
|
132 |
<potassium>$Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)</potassium> |
|
133 |
<sand>$Arena (DIN 18 123–%–2.5)</sand> |
|
134 |
<silt>$Limo (DIN 18 123–%–1)</silt> |
|
135 |
<sodium>$Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)</sodium> |
|
136 |
<texture>$Textural class</texture> |
|
137 |
</soilobs> |
|
138 |
</locationevent> |
|
139 |
<locationnarrative>$Locality</locationnarrative> |
|
140 |
<notespublic>$Observaciones</notespublic> |
|
141 |
<slopeaspect> |
|
142 |
<_compass> |
|
143 |
<value> |
|
144 |
<_alt> |
|
145 |
<1>$Direction</1> |
|
146 |
<2>$Orientación/exposicion</2> |
|
147 |
</_alt> |
|
148 |
</value> |
|
149 |
</_compass> |
|
150 |
</slopeaspect> |
|
151 |
<slopegradient>$Slope</slopegradient> |
|
152 |
<sourceaccessioncode>$Inventory code</sourceaccessioncode> |
|
153 |
</location> |
|
154 |
</VegBIEN> |
|
155 |
Inserted 19 new rows into database |
inputs/Madidi/test/import.1.organisms.xml.ref | ||
---|---|---|
1 |
Put template: |
|
2 |
<VegBIEN/>Inserted 1 new rows into database |
inputs/UNCC/test/import.specimens.xml.ref | ||
---|---|---|
1 |
Put template: |
|
2 |
<VegBIEN> |
|
3 |
<location id="-1"> |
|
4 |
<authorlocationcode> |
|
5 |
<_alt> |
|
6 |
<3>$accession</3> |
|
7 |
<4>$herbarium</4> |
|
8 |
</_alt> |
|
9 |
</authorlocationcode> |
|
10 |
<locationdetermination> |
|
11 |
<namedplace_id> |
|
12 |
<_simplifyPath> |
|
13 |
<next>parent_id/namedplace</next> |
|
14 |
<require>placename</require> |
|
15 |
<path> |
|
16 |
<namedplace> |
|
17 |
<rank>county</rank> |
|
18 |
<placename>$county</placename> |
|
19 |
<parent_id> |
|
20 |
<namedplace> |
|
21 |
<rank>stateProvince</rank> |
|
22 |
<placename>$state</placename> |
|
23 |
<parent_id> |
|
24 |
<namedplace> |
|
25 |
<rank>country</rank> |
|
26 |
<placename>$country</placename> |
|
27 |
</namedplace> |
|
28 |
</parent_id> |
|
29 |
</namedplace> |
|
30 |
</parent_id> |
|
31 |
</namedplace> |
|
32 |
</path> |
|
33 |
</_simplifyPath> |
|
34 |
</namedplace_id> |
|
35 |
</locationdetermination> |
|
36 |
<locationevent> |
|
37 |
<obsenddate> |
|
38 |
<_date> |
|
39 |
<date> |
|
40 |
<_dateRangeEnd> |
|
41 |
<value> |
|
42 |
<_date> |
|
43 |
<day> |
|
44 |
<_nullIf> |
|
45 |
<null>0</null> |
|
46 |
<type>float</type> |
|
47 |
<value>$collday</value> |
|
48 |
</_nullIf> |
|
49 |
</day> |
|
50 |
<month> |
|
51 |
<_nullIf> |
|
52 |
<null>0</null> |
|
53 |
<type>float</type> |
|
54 |
<value>$collmonth</value> |
|
55 |
</_nullIf> |
|
56 |
</month> |
|
57 |
<year> |
|
58 |
<_nullIf> |
|
59 |
<null>0</null> |
|
60 |
<type>float</type> |
|
61 |
<value>$collyear</value> |
|
62 |
</_nullIf> |
|
63 |
</year> |
|
64 |
</_date> |
|
65 |
</value> |
|
66 |
</_dateRangeEnd> |
|
67 |
</date> |
|
68 |
</_date> |
|
69 |
</obsenddate> |
|
70 |
<obsstartdate> |
|
71 |
<_date> |
|
72 |
<date> |
|
73 |
<_dateRangeStart> |
|
74 |
<value> |
|
75 |
<_date> |
|
76 |
<day> |
|
77 |
<_nullIf> |
|
78 |
<null>0</null> |
|
79 |
<type>float</type> |
|
80 |
<value>$collday</value> |
|
81 |
</_nullIf> |
|
82 |
</day> |
|
83 |
<month> |
|
84 |
<_nullIf> |
|
85 |
<null>0</null> |
|
86 |
<type>float</type> |
|
87 |
<value>$collmonth</value> |
|
88 |
</_nullIf> |
|
89 |
</month> |
|
90 |
<year> |
|
91 |
<_nullIf> |
|
92 |
<null>0</null> |
|
93 |
<type>float</type> |
|
94 |
<value>$collyear</value> |
|
95 |
</_nullIf> |
|
96 |
</year> |
|
97 |
</_date> |
|
98 |
</value> |
|
99 |
</_dateRangeStart> |
|
100 |
</date> |
|
101 |
</_date> |
|
102 |
</obsstartdate> |
|
103 |
<taxonoccurrence> |
|
104 |
<aggregateoccurrence> |
|
105 |
<collectiondate> |
|
106 |
<_date> |
|
107 |
<date> |
|
108 |
<_date> |
|
109 |
<day> |
|
110 |
<_nullIf> |
|
111 |
<null>0</null> |
|
112 |
<type>float</type> |
|
113 |
<value>$collday</value> |
|
114 |
</_nullIf> |
|
115 |
</day> |
|
116 |
<month> |
|
117 |
<_nullIf> |
|
118 |
<null>0</null> |
|
119 |
<type>float</type> |
|
120 |
<value>$collmonth</value> |
|
121 |
</_nullIf> |
|
122 |
</month> |
|
123 |
<year> |
|
124 |
<_nullIf> |
|
125 |
<null>0</null> |
|
126 |
<type>float</type> |
|
127 |
<value>$collyear</value> |
|
128 |
</_nullIf> |
|
129 |
</year> |
|
130 |
</_date> |
|
131 |
</date> |
|
132 |
</_date> |
|
133 |
</collectiondate> |
|
134 |
<notes> |
|
135 |
<_merge> |
|
136 |
<1>$comment1</1> |
|
137 |
<2>$comment2</2> |
|
138 |
<3>$comment3</3> |
|
139 |
<4>$comment4</4> |
|
140 |
<5> |
|
141 |
<_label> |
|
142 |
<label>campus</label> |
|
143 |
<value>$campus</value> |
|
144 |
</_label> |
|
145 |
</5> |
|
146 |
<6> |
|
147 |
<_label> |
|
148 |
<label>loaned to</label> |
|
149 |
<value>$loanto</value> |
|
150 |
</_label> |
|
151 |
</6> |
|
152 |
<7> |
|
153 |
<_label> |
|
154 |
<label>in or out</label> |
|
155 |
<value>$inorout</value> |
|
156 |
</_label> |
|
157 |
</7> |
|
158 |
</_merge> |
|
159 |
</notes> |
|
160 |
<plantobservation> |
|
161 |
<collectionnumber>$collectno</collectionnumber> |
|
162 |
<specimenreplicate> |
|
163 |
<institution_id><party><organizationname>$herbarium</organizationname></party></institution_id> |
|
164 |
<sourceaccessioncode>$accession</sourceaccessioncode> |
|
165 |
</specimenreplicate> |
|
166 |
</plantobservation> |
|
167 |
</aggregateoccurrence> |
|
168 |
<authortaxoncode> |
|
169 |
<_alt> |
|
170 |
<1>$collectno</1> |
|
171 |
<2>$SciName</2> |
|
172 |
</_alt> |
|
173 |
</authortaxoncode> |
|
174 |
<iscultivated> |
|
175 |
<_map> |
|
176 |
<cultivated>t</cultivated> |
|
177 |
<wild>f</wild> |
|
178 |
<*></*> |
|
179 |
<value> |
|
180 |
<_map> |
|
181 |
<Y>cultivated</Y> |
|
182 |
<N>wild</N> |
|
183 |
<*></*> |
|
184 |
<value>$cultivated</value> |
|
185 |
</_map> |
|
186 |
</value> |
|
187 |
</_map> |
|
188 |
</iscultivated> |
|
189 |
<isnative> |
|
190 |
<_map> |
|
191 |
<native>t</native> |
|
192 |
<exotic>f</exotic> |
|
193 |
<*></*> |
|
194 |
<value> |
|
195 |
<_map> |
|
196 |
<Y>cultivated</Y> |
|
197 |
<N>wild</N> |
|
198 |
<*></*> |
|
199 |
<value>$cultivated</value> |
|
200 |
</_map> |
|
201 |
</value> |
|
202 |
</_map> |
|
203 |
</isnative> |
|
204 |
<taxondetermination> |
|
205 |
<isoriginal>true</isoriginal> |
|
206 |
<role>identifier</role> |
|
207 |
<plantconcept_id> |
|
208 |
<plantconcept> |
|
209 |
<plantname_id> |
|
210 |
<_simplifyPath> |
|
211 |
<next>parent_id/plantname</next> |
|
212 |
<require>plantname</require> |
|
213 |
<path> |
|
214 |
<plantname> |
|
215 |
<rank>binomial</rank> |
|
216 |
<plantname>$SciName</plantname> |
|
217 |
<parent_id> |
|
218 |
<plantname> |
|
219 |
<rank>authority</rank> |
|
220 |
<plantname>$authors</plantname> |
|
221 |
<parent_id> |
|
222 |
<plantname> |
|
223 |
<rank>subspecies</rank> |
|
224 |
<plantname>$infraname</plantname> |
|
225 |
<parent_id> |
|
226 |
<plantname> |
|
227 |
<rank>species</rank> |
|
228 |
<plantname>$species</plantname> |
|
229 |
<parent_id> |
Also available in: Unified diff
inputs: Moved test outputs into subfolders, using the steps at <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCSV_subfolders#Move-test-outputs-into-subfolders>