Revision 4166
Added by Aaron Marcuse-Kubitza over 12 years ago
inputs/XAL/src/specimens/VegBIEN.csv | ||
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25 | 25 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
26 | 26 |
IndividualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
27 | 27 |
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
28 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2/_alt/1,
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29 |
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2/_alt/2,"This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). It is also unused: `grep -F ""<darwin:FieldNumber>"" inputs/XAL/src/digir.specimens.xml` returns no lines."
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28 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1,Allow datasource to define custom mappings that don't pass through the default mapping
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29 |
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2,"This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). It is also unused: `grep -F ""<darwin:FieldNumber>"" inputs/XAL/src/digir.specimens.xml` returns no lines.; Allow datasource to define custom mappings that don't pass through the default mapping"
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30 | 30 |
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
31 | 31 |
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
32 | 32 |
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
33 | 33 |
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname, |
34 |
CollectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2/_alt/1,
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35 |
FieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2/_alt/2,"This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). It is also unused: `grep -F ""<darwin:FieldNumber>"" inputs/XAL/src/digir.specimens.xml` returns no lines."
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34 |
CollectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1,Allow datasource to define custom mappings that don't pass through the default mapping
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35 |
FieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2,"This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). It is also unused: `grep -F ""<darwin:FieldNumber>"" inputs/XAL/src/digir.specimens.xml` returns no lines.; Allow datasource to define custom mappings that don't pass through the default mapping"
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36 | 36 |
ScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2, |
37 | 37 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first, |
38 | 38 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle, |
inputs/ARIZ/src/specimens/VegBIEN.csv | ||
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19 | 19 |
StateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
20 | 20 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
21 | 21 |
ContinentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
22 |
VerbatimCollectingDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/0,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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22 |
VerbatimCollectingDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/0,Allow datasource to define custom mappings that don't pass through the default mapping
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23 | 23 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
24 | 24 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
25 | 25 |
YearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
26 |
VerbatimCollectingDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/0,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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26 |
VerbatimCollectingDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/0,Allow datasource to define custom mappings that don't pass through the default mapping
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27 | 27 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
28 | 28 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
29 | 29 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
30 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/0,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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30 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/0,Allow datasource to define custom mappings that don't pass through the default mapping
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31 | 31 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
32 | 32 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
33 | 33 |
YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/SpeciesLink/src/specimens/VegBIEN.csv | ||
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57 | 57 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
58 | 58 |
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
59 | 59 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
60 |
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2/_alt/1,
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61 |
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
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60 |
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1,Allow datasource to define custom mappings that don't pass through the default mapping
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61 |
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec) |
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62 | 62 |
----- |
63 | 63 |
SELECT count(*) FROM ""SpeciesLink"".specimens |
64 | 64 |
WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber"" |
65 |
-----" |
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66 |
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
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65 |
-----; Allow datasource to define custom mappings that don't pass through the default mapping"
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66 |
fieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec) |
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67 | 67 |
----- |
68 | 68 |
SELECT count(*) FROM ""SpeciesLink"".specimens |
69 | 69 |
WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber"" |
70 |
-----" |
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70 |
-----; Allow datasource to define custom mappings that don't pass through the default mapping"
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71 | 71 |
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
72 | 72 |
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
73 | 73 |
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
... | ... | |
79 | 79 |
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname, |
80 | 80 |
GlobalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode, |
81 | 81 |
CollectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1, |
82 |
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2/_alt/1,
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83 |
FieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
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82 |
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1,Allow datasource to define custom mappings that don't pass through the default mapping
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83 |
FieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec) |
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84 | 84 |
----- |
85 | 85 |
SELECT count(*) FROM ""SpeciesLink"".specimens |
86 | 86 |
WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber"" |
87 |
-----" |
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88 |
fieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
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87 |
-----; Allow datasource to define custom mappings that don't pass through the default mapping"
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88 |
fieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec) |
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89 | 89 |
----- |
90 | 90 |
SELECT count(*) FROM ""SpeciesLink"".specimens |
91 | 91 |
WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber"" |
92 |
-----" |
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92 |
-----; Allow datasource to define custom mappings that don't pass through the default mapping"
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93 | 93 |
ScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2, |
94 | 94 |
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2, |
95 | 95 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first, |
inputs/SpeciesLink/src/specimens/test.xml.ref | ||
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386 | 386 |
<_alt> |
387 | 387 |
<0>$dwc_curatorial_CollectorNumber</0> |
388 | 388 |
<1>$conceptual_darwin_2003_1_0_CollectorNumber</1> |
389 |
<2>$dwc_terms_recordNumber</2> |
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389 | 390 |
</_alt> |
390 | 391 |
</1> |
391 | 392 |
<2> |
392 | 393 |
<_alt> |
393 |
<1>$dwc_terms_recordNumber</1> |
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394 |
<2> |
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395 |
<_alt> |
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396 |
<0>$dwc_curatorial_FieldNumber</0> |
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397 |
<1>$conceptual_darwin_2003_1_0_FieldNumber</1> |
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398 |
<2>$dwc_terms_fieldNumber</2> |
|
399 |
</_alt> |
|
400 |
</2> |
|
394 |
<0>$dwc_curatorial_FieldNumber</0> |
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395 |
<1>$conceptual_darwin_2003_1_0_FieldNumber</1> |
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396 |
<2>$dwc_terms_fieldNumber</2> |
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401 | 397 |
</_alt> |
402 | 398 |
</2> |
403 | 399 |
</_alt> |
... | ... | |
460 | 456 |
<_alt> |
461 | 457 |
<0>$dwc_curatorial_CollectorNumber</0> |
462 | 458 |
<1>$conceptual_darwin_2003_1_0_CollectorNumber</1> |
459 |
<2>$dwc_terms_recordNumber</2> |
|
463 | 460 |
</_alt> |
464 | 461 |
</1> |
465 | 462 |
<2> |
466 | 463 |
<_alt> |
467 |
<1>$dwc_terms_recordNumber</1> |
|
468 |
<2> |
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469 |
<_alt> |
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470 |
<0>$dwc_curatorial_FieldNumber</0> |
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471 |
<1>$conceptual_darwin_2003_1_0_FieldNumber</1> |
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472 |
<2>$dwc_terms_fieldNumber</2> |
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473 |
</_alt> |
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474 |
</2> |
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464 |
<0>$dwc_curatorial_FieldNumber</0> |
|
465 |
<1>$conceptual_darwin_2003_1_0_FieldNumber</1> |
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466 |
<2>$dwc_terms_fieldNumber</2> |
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475 | 467 |
</_alt> |
476 | 468 |
</2> |
477 | 469 |
</_alt> |
mappings/Veg+-VegBIEN.csv | ||
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97 | 97 |
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value, |
98 | 98 |
EventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1, |
99 | 99 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1, |
100 |
DateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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101 |
dateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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100 |
DateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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101 |
dateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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102 | 102 |
DayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
103 | 103 |
dayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
104 | 104 |
MonthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
... | ... | |
113 | 113 |
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value, |
114 | 114 |
EventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1, |
115 | 115 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1, |
116 |
DateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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117 |
dateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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116 |
DateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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117 |
dateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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118 | 118 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
119 | 119 |
dayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
120 | 120 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
... | ... | |
161 | 161 |
sodium,/location/locationevent/soilobs/sodium, |
162 | 162 |
Texture,/location/locationevent/soilobs/texture, |
163 | 163 |
texture,/location/locationevent/soilobs/texture, |
164 |
DateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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165 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
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164 |
DateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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165 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
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166 | 166 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
167 | 167 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
168 | 168 |
MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
... | ... | |
185 | 185 |
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
186 | 186 |
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
187 | 187 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
188 |
RecordNumber/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
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189 |
recordNumber/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
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188 | 190 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
189 | 191 |
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
190 | 192 |
RecordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2, |
... | ... | |
239 | 241 |
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition, |
240 | 242 |
RelativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition, |
241 | 243 |
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition, |
244 |
RecordNumber/_alt,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
245 |
recordNumber/_alt,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
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242 | 246 |
CollectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1, |
243 | 247 |
collectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1, |
244 | 248 |
RecordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2, |
... | ... | |
279 | 283 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last, |
280 | 284 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname", |
281 | 285 |
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname", |
286 |
ScientificNameAuthorship/_alt,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt",Allow datasource to define custom mappings that don't pass through the default mapping |
|
287 |
scientificNameAuthorship/_alt,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt",Allow datasource to define custom mappings that don't pass through the default mapping |
|
282 | 288 |
ScientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt/1", |
283 | 289 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt/1", |
284 | 290 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt/2", |
... | ... | |
303 | 309 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
304 | 310 |
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
305 | 311 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
306 |
DateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
|
|
307 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
|
|
312 |
DateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
313 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
308 | 314 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
309 | 315 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
310 | 316 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
mappings/Veg+.cs-VegBIEN.csv | ||
---|---|---|
48 | 48 |
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription, |
49 | 49 |
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value, |
50 | 50 |
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1, |
51 |
dateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
|
|
51 |
dateCollected/_alt,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
52 | 52 |
dayCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
53 | 53 |
monthCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
54 | 54 |
yearCollected,"/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
... | ... | |
56 | 56 |
collectedDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2/_alt/3, |
57 | 57 |
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value, |
58 | 58 |
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1, |
59 |
dateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
|
|
59 |
dateCollected/_alt,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
60 | 60 |
dayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
61 | 61 |
monthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
62 | 62 |
yearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
... | ... | |
80 | 80 |
silt,/location/locationevent/soilobs/silt, |
81 | 81 |
sodium,/location/locationevent/soilobs/sodium, |
82 | 82 |
texture,/location/locationevent/soilobs/texture, |
83 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
|
|
83 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
84 | 84 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
85 | 85 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
86 | 86 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
... | ... | |
92 | 92 |
volumeCanopy,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover, |
93 | 93 |
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
94 | 94 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
95 |
recordNumber/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
95 | 96 |
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
96 | 97 |
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2, |
97 | 98 |
authorPlantCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/3, |
... | ... | |
119 | 120 |
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag, |
120 | 121 |
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition, |
121 | 122 |
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition, |
123 |
recordNumber/_alt,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
122 | 124 |
collectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/1, |
123 | 125 |
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/2, |
124 | 126 |
authorPlantCode,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1/_alt/3, |
... | ... | |
139 | 141 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle, |
140 | 142 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last, |
141 | 143 |
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname", |
144 |
scientificNameAuthorship/_alt,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt",Allow datasource to define custom mappings that don't pass through the default mapping |
|
142 | 145 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt/1", |
143 | 146 |
scientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname/_alt/2", |
144 | 147 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname", |
... | ... | |
151 | 154 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
152 | 155 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
153 | 156 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
154 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
|
|
157 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
155 | 158 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
156 | 159 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
157 | 160 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
mappings/for_review/Veg+-VegCore.csv | ||
---|---|---|
1 | 1 |
Veg+,VegCore,Comments |
2 | 2 |
continentOcean,continent, |
3 |
dateCollected/_alt,dateCollected/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
|
|
3 |
dateCollected/_alt,dateCollected/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
4 | 4 |
dayCollected,dateCollected, |
5 | 5 |
monthCollected,dateCollected, |
6 | 6 |
yearCollected,dateCollected, |
7 | 7 |
dateCollected,dateCollected, |
8 | 8 |
collectedDate,dateCollected, |
9 |
dateIdentified/_alt,dateIdentified/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
|
|
9 |
dateIdentified/_alt,dateIdentified/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
10 | 10 |
dayIdentified,dateIdentified, |
11 | 11 |
monthIdentified,dateIdentified, |
12 | 12 |
yearIdentified,dateIdentified, |
... | ... | |
43 | 43 |
parentPlotID,parentLocationID, |
44 | 44 |
preparation,preparations, |
45 | 45 |
preparationType,preparations, |
46 |
recordNumber/_alt,recordNumber/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
46 | 47 |
collectorNumber,recordNumber, |
47 | 48 |
recordNumber,recordNumber, |
48 | 49 |
authorPlantCode,recordNumber, |
... | ... | |
51 | 52 |
collector.surName,recordedBy.surName, |
52 | 53 |
relatedCatalogItem,relatedResourceID, |
53 | 54 |
relationshipType,relationshipOfResource, |
55 |
scientificNameAuthorship/_alt,scientificNameAuthorship/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
54 | 56 |
scientificNameAuthorship,scientificNameAuthorship, |
55 | 57 |
scientificNameAuthor,scientificNameAuthorship, |
56 | 58 |
species,specificEpithet, |
mappings/Veg+-VegCore.csv | ||
---|---|---|
1 | 1 |
Veg+,VegCore,Comments |
2 | 2 |
continentOcean,continent, |
3 |
dateCollected/_alt,dateCollected/_alt,Allow datasource to define custom dateCollected mappings that don't pass through the default dateCollected mapping
|
|
3 |
dateCollected/_alt,dateCollected/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
4 | 4 |
dayCollected,"dateCollected/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
5 | 5 |
monthCollected,"dateCollected/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
6 | 6 |
yearCollected,"dateCollected/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
7 | 7 |
dateCollected,dateCollected/_alt/2, |
8 | 8 |
collectedDate,dateCollected/_alt/3, |
9 |
dateIdentified/_alt,dateIdentified/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
|
|
9 |
dateIdentified/_alt,dateIdentified/_alt,Allow datasource to define custom mappings that don't pass through the default mapping
|
|
10 | 10 |
dayIdentified,"dateIdentified/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
11 | 11 |
monthIdentified,"dateIdentified/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
12 | 12 |
yearIdentified,"dateIdentified/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
... | ... | |
43 | 43 |
parentPlotID,parentLocationID, |
44 | 44 |
preparation,preparations, |
45 | 45 |
preparationType,preparations, |
46 |
recordNumber/_alt,recordNumber/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
46 | 47 |
collectorNumber,recordNumber/_alt/1, |
47 | 48 |
recordNumber,recordNumber/_alt/2, |
48 | 49 |
authorPlantCode,recordNumber/_alt/3, |
... | ... | |
51 | 52 |
collector.surName,recordedBy.surName, |
52 | 53 |
relatedCatalogItem,relatedResourceID, |
53 | 54 |
relationshipType,relationshipOfResource, |
55 |
scientificNameAuthorship/_alt,scientificNameAuthorship/_alt,Allow datasource to define custom mappings that don't pass through the default mapping |
|
54 | 56 |
scientificNameAuthorship,scientificNameAuthorship/_alt/1, |
55 | 57 |
scientificNameAuthor,scientificNameAuthorship/_alt/2, |
56 | 58 |
species,specificEpithet, |
Also available in: Unified diff
mappings/Veg+-VegCore.csv: Add pass through /_alt mapping for all terms in this map that are merged with _alt, to allow datasource to define custom mappings that don't pass through the default mapping. This also allows mappings/Veg+-VegCore.csv to be joined with itself idempotently, to support multi-level chains of mappings.