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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3701 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Added synchronization of back...
  bin 4172 over 12 years Aaron Marcuse-Kubitza union: Don't eliminate duplicate rows based on ...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 4181 over 12 years Aaron Marcuse-Kubitza input.Makefile: $(tables): Allow datasource to ...
  lib 4171 over 12 years Aaron Marcuse-Kubitza sql_io.py: put_table(): MissingCastException: U...
  mappings 4180 over 12 years Aaron Marcuse-Kubitza mappings/Veg+.terms.csv: growthForm: Documented...
  schemas 4169 over 12 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 4091 over 12 years Aaron Marcuse-Kubitza to_do/: svn:ignore OpenOffice lock files
Makefile 10.1 KB 3764 over 12 years Aaron Marcuse-Kubitza root Makefile, input.Makefile: Maps validation:...
README.TXT 8.99 KB 4170 over 12 years Aaron Marcuse-Kubitza README.TXT: After a new import: Updated command...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
4181 08/22/2012 02:02 PM Aaron Marcuse-Kubitza

input.Makefile: $(tables): Allow datasource to specify custom import order in src/import_order.txt

4180 08/22/2012 01:29 PM Aaron Marcuse-Kubitza

mappings/Veg+.terms.csv: growthForm: Documented source of standard terms

4179 08/22/2012 10:21 AM Aaron Marcuse-Kubitza

inputs/SALVIAS*/src/1.organisms/map.csv: Removed no longer applicable comments, which related to mappings that were in effect long ago

4178 08/22/2012 10:09 AM Aaron Marcuse-Kubitza

inputs/SALVIAS/src/2.stems/map.csv: Added comments from corresponding SALVIAS-CSV organisms columns

4177 08/22/2012 09:54 AM Aaron Marcuse-Kubitza

inputs/SALVIAS*/src/1.organisms/map.csv: Habit: Mapped to new Veg+ habit term

4176 08/22/2012 09:53 AM Aaron Marcuse-Kubitza

inputs/SALVIAS*/src/1.organisms/map.csv: Habit: Don't filter out values not part of the provided terms list, because such values should be flagged as invalid in the error maps rather than silently discarded. This also ensures that any valid values which are not part of the provided terms list are kept.

4175 08/22/2012 09:45 AM Aaron Marcuse-Kubitza

mappings/Veg+-VegCore.csv: habit: Map to new verbatimGrowthForm since this field is not necessarily standardized

4174 08/22/2012 09:42 AM Aaron Marcuse-Kubitza

mappings/Makefile: Veg+.cs-VegBIEN.csv: Join new Veg+-VegCore.to_self.csv (self-join), instead of Veg+-VegCore.csv, to VegCore-VegBIEN.csv, to support two-level chains of mappings in Veg+-VegCore.csv

4173 08/22/2012 09:40 AM Aaron Marcuse-Kubitza

mappings/Veg+-VegCore.csv: /_alt pass through mappings: Removed comment because the two-level mapping propagates it to all fields ending in /_alt, even though it doesn't apply to them, causing the main VegBIEN map and several datasources' maps to change unnecessarily. Also, the comment is not completely accurate because /_alt pass throughs are now used primarily to support idempotent self-joins of Veg+-VegCore.csv.

4172 08/22/2012 09:21 AM Aaron Marcuse-Kubitza

union: Don't eliminate duplicate rows based on matches between map_0's output column and map_1's input column, because union is now being used for self-joins and it is legitimate for a term to appear as both an input and an output

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