Project

General

Profile

1
VegCore[Veg+],VegBIEN:,Comments
2
plotArea,/location/area,
3
plotName,/location/authorlocationcode/_alt/1,
4
fieldNumber,/location/authorlocationcode/_alt/2,
5
occurrenceID,/location/authorlocationcode/_alt/3,
6
institutionCode,/location/authorlocationcode/_alt/4/_merge/1,
7
collectionCode,/location/authorlocationcode/_alt/4/_merge/2/_merge/1,
8
collectionID,/location/authorlocationcode/_alt/4/_merge/2/_merge/2,
9
voucherType,"/location/authorlocationcode/_alt/4/_merge/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
10
catalogNumber,"/location/authorlocationcode/_alt/4/_merge/3/_if[@name=""if indirect voucher""]/else",
11
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
12
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
13
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
14
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
15
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
16
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
17
landform,/location/landform,
18
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
19
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
20
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
21
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
22
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
23
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
24
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
25
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
26
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
27
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
28
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
29
samplingProtocol,/location/locationevent/*_id/method/name,
30
projectName,/location/locationevent/*_id/project/projectname,
31
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
32
fieldNumber,/location/locationevent/authoreventcode,
33
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
34
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
35
plotEventEndDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value,
36
eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1,
37
dateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2,
38
plotEventStartDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value,
39
eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1,
40
dateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2,
41
precipitation,/location/locationevent/precipitation,
42
acidity,/location/locationevent/soilobs/acidity,
43
baseSaturation,/location/locationevent/soilobs/basesaturation,
44
calcium,/location/locationevent/soilobs/calcium,
45
carbon,/location/locationevent/soilobs/carbon,
46
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,
47
clay,/location/locationevent/soilobs/clay,
48
conductivity,/location/locationevent/soilobs/conductivity,
49
magnesium,/location/locationevent/soilobs/magnesium,
50
nitrogen,/location/locationevent/soilobs/nitrogen,
51
organic,/location/locationevent/soilobs/organic,
52
ph,/location/locationevent/soilobs/ph,
53
phosphorus,/location/locationevent/soilobs/phosphorus,
54
potassium,/location/locationevent/soilobs/potassium,
55
sand,/location/locationevent/soilobs/sand,
56
silt,/location/locationevent/soilobs/silt,
57
sodium,/location/locationevent/soilobs/sodium,
58
texture,/location/locationevent/soilobs/texture,
59
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date,
60
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
61
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
62
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
63
volumeCanopy,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,
64
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
65
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
66
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
67
individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
68
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
69
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
70
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
71
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
72
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
73
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
74
stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
75
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,
76
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
77
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
78
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
79
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
80
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
81
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
82
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,
83
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,
84
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
85
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
86
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,
87
relativePlotY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,
88
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
89
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2,
90
growthForm,/location/locationevent/taxonoccurrence/growthform,
91
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
92
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
93
individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode,
94
computer.scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
95
computer.taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/first",
96
computer.infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
97
computer.specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
98
computer.genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
99
computer.family,"/location/locationevent/taxonoccurrence/taxondetermination[role=computer]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
100
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/party/givenname/_namePart/first,
101
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/party/middlename/_namePart/middle,
102
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/party/surname/_namePart/last,
103
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
104
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
105
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
106
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
107
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
108
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
109
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
110
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
111
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
112
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
113
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value,
114
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/notes,
115
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/taxonfit,
116
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
117
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
118
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
119
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
120
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
121
temperature,/location/locationevent/temperature,
122
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
123
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
124
locality,/location/locationnarrative/_merge/1,
125
verbatimLocality,/location/locationnarrative/_merge/2,
126
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
127
plotNotes,/location/notespublic,
128
parentPlotName,/location/parent_id/location/authorlocationcode,
129
parentLocationID,/location/parent_id/location/sourceaccessioncode,
130
slopeAspect,/location/slopeaspect/_compass/value,
131
slopeGradient,/location/slopegradient,
132
locationID,/location/sourceaccessioncode,
133
acceptedNameUsage,,
134
acceptedNameUsageID,,
135
associatedMedia,,
136
associatedOccurrences,,
137
associatedReferences,,
138
associatedSequences,,
139
associatedTaxa,,
140
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
141
bed,,
142
behavior,,
143
countryCode,,
144
dataGeneralizations,,
145
datasetID,,
146
datasetName,,
147
day,,Brad: OMIT
148
dcterms:accessRights,,
149
dcterms:bibliographicCitation,,
150
dcterms:language,,
151
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
152
dcterms:references,,
153
dcterms:rights,,
154
dcterms:rightsHolder,,
155
dcterms:type,,
156
disposition,,
157
dynamicProperties,,
158
earliestAgeOrLowestStage,,
159
earliestEonOrLowestEonothem,,
160
earliestEpochOrLowestSeries,,
161
earliestEraOrLowestErathem,,
162
earliestPeriodOrLowestSystem,,
163
endDayOfYear,,
164
eventID,,
165
eventRemarks,,
166
eventTime,,Brad: OMIT
167
footprintSRS,,
168
footprintSpatialFit,,
169
formation,,
170
geodeticDatum,,
171
geologicalContextID,,
172
georeferenceProtocol,,
173
georeferenceRemarks,,
174
georeferenceSources,,
175
georeferenceVerificationStatus,,
176
georeferencedBy,,
177
georeferencedDate,,
178
group,,
179
higherClassification,,
180
higherGeography,,
181
higherGeographyID,,
182
highestBiostratigraphicZone,,
183
identificationID,,
184
identificationReferences,,
185
identificationRemarks,,
186
identificationVerificationStatus,,
187
informationWithheld,,
188
institutionID,,
189
island,,
190
islandGroup,,
191
latestAgeOrHighestStage,,
192
latestEonOrHighestEonothem,,
193
latestEpochOrHighestSeries,,
194
latestEraOrHighestErathem,,
195
latestPeriodOrHighestSystem,,
196
lifeStage,,
197
lithostratigraphicTerms,,
198
locationAccordingTo,,
199
locationRemarks,,
200
lowestBiostratigraphicZone,,
201
maximumDistanceAboveSurfaceInMeters,,
202
measurementAccuracy,,
203
measurementDeterminedBy,,
204
measurementDeterminedDate,,
205
measurementID,,
206
measurementMethod,,
207
measurementRemarks,,
208
measurementType,,
209
measurementUnit,,
210
measurementValue,,
211
member,,
212
minimumDistanceAboveSurfaceInMeters,,
213
month,,
214
municipality,,
215
nameAccordingTo,,
216
nameAccordingToID,,
217
namePublishedIn,,
218
namePublishedInID,,
219
namePublishedInYear,,
220
nomenclaturalCode,,
221
nomenclaturalStatus,,
222
occurrenceRemarks,,
223
occurrenceStatus,,
224
originalNameUsage,,
225
originalNameUsageID,,
226
otherCatalogNumbers,,
227
ownerInstitutionCode,,
228
parentNameUsage,,
229
parentNameUsageID,,
230
pointRadiusSpatialFit,,
231
preparations,,Brad: OMIT
232
previousIdentifications,,Brad: OMIT
233
relatedResourceID,,Brad: OMIT
234
relationshipAccordingTo,,
235
relationshipEstablishedDate,,
236
relationshipOfResource,,Brad: OMIT
237
relationshipRemarks,,
238
reproductiveCondition,,
239
resourceID,,
240
resourceRelationshipID,,
241
samplingEffort,,
242
scientificNameID,,
243
startDayOfYear,,
244
subgenus,,
245
taxonConceptID,,
246
taxonID,,
247
taxonRank,,
248
taxonomicStatus,,
249
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
250
verbatimCoordinateSystem,,
251
verbatimCoordinates,,
252
verbatimDepth,,
253
verbatimEventDate,,
254
verbatimSRS,,
255
verbatimTaxonRank,,
256
vernacularName,,
257
waterBody,,
258
year,,
(13-13/17)