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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 3701 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Added synchronization of back...
  bin 4172 over 12 years Aaron Marcuse-Kubitza union: Don't eliminate duplicate rows based on ...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 4195 over 12 years Aaron Marcuse-Kubitza inputs/SALVIAS*/1.organisms/map.csv: Remapped O...
  lib 4171 over 12 years Aaron Marcuse-Kubitza sql_io.py: put_table(): MissingCastException: U...
  mappings 4194 over 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Mapped verbatimSc...
  schemas 4190 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxondetermination: taxond...
  to_do 4091 over 12 years Aaron Marcuse-Kubitza to_do/: svn:ignore OpenOffice lock files
Makefile 10.1 KB 3764 over 12 years Aaron Marcuse-Kubitza root Makefile, input.Makefile: Maps validation:...
README.TXT 8.93 KB 4182 over 12 years Aaron Marcuse-Kubitza inputs: Move src subdir into main dir, using th...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...

Latest revisions

# Date Author Comment
4195 08/23/2012 04:34 PM Aaron Marcuse-Kubitza

inputs/SALVIAS*/1.organisms/map.csv: Remapped OrigFamily/OrigGenus/OrigSpecies to new verbatim* taxonomic names. Also remapped cfaff to verbatimIdentificationQualifier, because it was previously mapped to the same taxondetermination as the Orig* terms, but this will later need to be remapped to identificationQualifier (not in this commit because that is a separate change). Note that the switch to the verbatim* taxonomic names removes a concatenated binomial that was part of the previous mappings, which put OrigGenus and OrigSpecies together into one scientificName.
4194 08/23/2012 03:34 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped verbatimScientificName to taxonoccurrence.authortaxoncode as an alternative to scientificName
4193 08/23/2012 03:12 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped verbatim* taxonomic terms
4192 08/23/2012 03:10 PM Aaron Marcuse-Kubitza

mappings/Veg+.terms.csv: Added verbatimIdentificationQualifier
4191 08/23/2012 03:07 PM Aaron Marcuse-Kubitza

mappings/Veg+.terms.csv: Added verbatimScientificName
4190 08/23/2012 03:06 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxondetermination: taxondetermination_unique unique index: Added isoriginal so an "original" determination in the same row (as found in SALVIAS) will be seen as distinct from the scrubbed determination, even if they are to the same plant name
4189 08/23/2012 02:57 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonomic terms: Removed ":[isoriginal=true]" because there may be multiple determinations for an organism (either in separate rows or, for SALVIAS, in separate columns), and not all will be the original determination
4188 08/23/2012 02:43 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxondetermination.role: Default to 'unknown' so that the field is optional
4187 08/23/2012 02:41 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: role enum: Added 'unknown' value
4186 08/23/2012 02:20 PM Aaron Marcuse-Kubitza

mappings/Veg+.terms.csv: Added verbatim* taxonomic terms

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