Madidi[Veg+],VegBIEN:,Comments

Area,/location/area,

Inventory name,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",

Inventory code,"/location/authorlocationcode/_alt/2/_if[@name=""if locationID""]/cond/_exists",

Textural class,/location/locationevent/soilobs/texture,

Locality,/location/locationnarrative/_merge/1,

Observaciones,/location/notespublic,

Direction,/location/slopeaspect/_compass/value/_alt/1,Part files provide either this field or Direction

Orientación/exposicion,/location/slopeaspect/_compass/value/_alt/2,Part files provide either this field or Orientación

Slope,/location/slopegradient,

Put template:

<VegBIEN>

    <location id="-1">

        <area>$Area</area>

        <authorlocationcode>$Inventory name</authorlocationcode>

        <elevation>

            </_compass>

        </slopeaspect>

        <slopegradient>$Slope</slopegradient>

    </location>

</VegBIEN>

Inserted 19 new rows into database

SALVIAS-CSV,VegBIEN:,Comments

plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"

plot_code,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)

PLOT_ID,"/location/authorlocationcode/_alt/2/_if[@name=""if locationID""]/cond/_exists","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."

soil_texture,/location/locationevent/soilobs/texture,

temp_c,/location/locationevent/temperature,

locality_description,/location/locationnarrative/_merge/1,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"

slope_aspect,/location/slopeaspect/_compass/value,

slope_gradient,/location/slopegradient,

Put template:

<VegBIEN>

    <location id="-1">

        <area>$plot_area_ha</area>

        <authorlocationcode>$plot_code</authorlocationcode>

        <elevation>

        <locationnarrative>$locality_description</locationnarrative>

        <slopeaspect><_compass><value>$slope_aspect</value></_compass></slopeaspect>

        <slopegradient>$slope_gradient</slopegradient>

    </location>

</VegBIEN>

Inserted 16 new rows into database

SALVIAS-CSV,VegBIEN:,Comments

subplot,/location/authorlocationcode/_alt/1,

subplot,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/cond/_exists",

plot_code,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",

det_type,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1",Brad: Map instead as for voucher_string

voucher_string,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."

Put template:

<VegBIEN>

    <location id="-1">

        <authorlocationcode>

            <_alt>

                <1>$subplot</1>

                </voucher>

            </taxonoccurrence>

        </locationevent>

    </location>

</VegBIEN>

Inserted 51 new rows into database

CTFS[Veg+],VegBIEN:,Comments

QuadratName,/location/authorlocationcode/_alt/1,

QuadratName,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/cond/_exists",

PlotID,"/location/authorlocationcode/_alt/2/_if[@name=""if locationID""]/cond/_exists",

QuadratID,/location/sourceaccessioncode,

StartX,/location/sublocationxposition,

StartY,/location/sublocationyposition,

Put template:

<VegBIEN>

    <location id="-1">

        <authorlocationcode>$QuadratName</authorlocationcode>

        <sourceaccessioncode>$QuadratID</sourceaccessioncode>

        <sublocationxposition>$StartX</sublocationxposition>

        <sublocationyposition>$StartY</sublocationyposition>

CTFS[Veg+],VegBIEN:,Comments

SizeOfSite,/location/area,

PlotName,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",

PlotID,"/location/authorlocationcode/_alt/2/_if[@name=""if locationID""]/cond/_exists",

CountryName,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",

DescriptionOfSite,/location/locationnarrative/_merge/1,

LocationName,/location/locationnarrative/_merge/1,

Put template:

<VegBIEN>

    <location id="-1">

        <area>$SizeOfSite</area>

        <authorlocationcode>$PlotName</authorlocationcode>

        <elevation>

                <1>$LocationName</1>

            </_alt>

        </locationnarrative>

    </location>

</VegBIEN>

Inserted 6 new rows into database

SALVIAS,VegBIEN:,Comments

plot_area_ha,/location/area,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"

SiteCode,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)

PlotID,"/location/authorlocationcode/_alt/2/_if[@name=""if locationID""]/cond/_exists","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."

soil_texture,"/location/locationevent/soilobs/texture/_units:[default=""%"",to=]/value",

Temp,/location/locationevent/temperature,

Locality_Description,/location/locationnarrative/_merge/1,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"

slope_aspect,/location/slopeaspect/_compass/value,

slope_gradient,/location/slopegradient,

Put template:

<VegBIEN>

    <location id="-1">

        <area>$plot_area_ha</area>

        <authorlocationcode>$SiteCode</authorlocationcode>

        <elevation>

        <locationnarrative>$Locality_Description</locationnarrative>

        <slopeaspect><_compass><value>$slope_aspect</value></_compass></slopeaspect>

        <slopegradient>$slope_gradient</slopegradient>

    </location>

</VegBIEN>

Inserted 23 new rows into database

SALVIAS,VegBIEN:,Comments

Line,/location/authorlocationcode/_alt/1,

Line,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/cond/_exists",

PlotCode,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/else",

DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

coll_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1",Brad: Map instead as for voucher_string

SourceVoucher,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2","Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."

Put template:

<VegBIEN>

    <location id="-1">

        <authorlocationcode>

            <_alt>

                <1>$Line</1>

                </voucher>

            </taxonoccurrence>

        </locationevent>

    </location>

</VegBIEN>

Inserted 42 new rows into database

VegCore[Veg+],VegBIEN:,Comments

plotArea,/location/area,

subplot,/location/authorlocationcode/_alt/1,

subplot,"/location/authorlocationcode/_alt/1/_if[@name=""if subplot""]/cond/_exists",

verbatimLocality,/location/locationnarrative/_merge/2,

habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"

plotNotes,/location/notespublic,

slopeAspect,/location/slopeaspect/_compass/value,

slopeGradient,/location/slopegradient,

subplotID,/location/sourceaccessioncode,

subplotX,/location/sublocationxposition,

subplotY,/location/sublocationyposition,

Veg+,VegBIEN:,Comments

PlotArea,/location/area,

SizeOfSite,/location/area,

plotArea,/location/area,

habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"

PlotNotes,/location/notespublic,

plotNotes,/location/notespublic,

SlopeAspect,/location/slopeaspect/_compass/value,

slopeAspect,/location/slopeaspect/_compass/value,

SlopeGradient,/location/slopegradient,

QuadratID,/location/sourceaccessioncode,

SubplotID,/location/sourceaccessioncode,

subplotID,/location/sourceaccessioncode,

StartX,/location/sublocationxposition,

SubplotX,/location/sublocationxposition,

subplotX,/location/sublocationxposition,

Veg+,VegBIEN:,Comments

SizeOfSite,/location/area,

plotArea,/location/area,

QuadratName,/location/authorlocationcode/_alt/1,

verbatimLocality,/location/locationnarrative/_merge/2,

habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"

plotNotes,/location/notespublic,

slopeAspect,/location/slopeaspect/_compass/value,

slopeGradient,/location/slopegradient,

QuadratID,/location/sourceaccessioncode,

subplotID,/location/sourceaccessioncode,

StartX,/location/sublocationxposition,

subplotX,/location/sublocationxposition,

StartY,/location/sublocationyposition,

VegCore[Veg+],VegBIEN:,Comments

plotArea,//location/area,

subplot,//location/authorlocationcode,

subplot,"//location/authorlocationcode/_if[@name=""if subplot""]/cond/_exists",

verbatimLocality,//location/locationnarrative,

habitat,"//location/locationnarrative/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"

plotNotes,//location/notespublic,

slopeAspect,//location/slopeaspect,

slopeGradient,//location/slopegradient,

subplotID,//location/sourceaccessioncode,

subplotX,//location/sublocationxposition,

subplotY,//location/sublocationyposition,