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Revision 4365

Added by Aaron Marcuse-Kubitza over 12 years ago

inputs/CTFS/StemObservation/map.csv: Remapped StemID to authorStemCode since it's only unique within the parent organism (Tree), not a globally unique ID as is required for stemID

View differences:

inputs/CTFS/StemObservation/map.csv
4 4 
SpeciesID,,
5 5 
SubSpeciesID,,
6 6 
TreeID,,
7 
StemID,authorStemCode,
7 8 
MeasureID,individualID,
8 9 
HOM,,
9 10 
PrimaryStem,,
inputs/CTFS/StemObservation/map.full.csv
6 6 
PlotID,PlotID
7 7 
QuadratID,QuadratID
8 8 
SpeciesName,SpeciesName
9 
StemID,StemID
10 9 
StemTag,StemTag
11 10 
SubSpeciesName,SubSpeciesName
12 11 
Tag,Tag
12 
StemID,authorStemCode,
13 13 
MeasureID,individualID,
14 14 
x,organismX,
15 15 
y,organismY,
inputs/CTFS/StemObservation/VegBIEN.csv
7 7 
CensusID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
8 8 
CensusID,"/location/locationevent/_if[@name=""if subplot""]/then/parent_id/locationevent/sourceaccessioncode",
9 9 
MeasureID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
10 
StemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
10 11 
DBH,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
11 
StemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
12 12 
StemTag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
13 13 
Tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
14 14 
x,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,
inputs/CTFS/StemObservation/test.xml.ref
9 9 
                    <plantobservation>
10 10 
                        <sourceaccessioncode>$MeasureID</sourceaccessioncode>
11 11 
                        <stemobservation>
12 
                            <authorstemcode>$StemID</authorstemcode>
12 13 
                            <diameterbreastheight>$DBH</diameterbreastheight>
13 
                            <sourceaccessioncode>$StemID</sourceaccessioncode>
14 14 
                            <stemtag>
15 15 
                                <iscurrent>true</iscurrent>
16 16 
                                <tag>

Also available in: Unified diff