Revision 4560
Added by Aaron Marcuse-Kubitza over 12 years ago
| inputs/XAL/Specimen/VegBIEN.csv | ||
|---|---|---|
| 47 | 47 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 48 | 48 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 49 | 49 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 50 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 51 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 52 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 50 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 51 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 52 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 53 | 53 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 54 | 54 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 55 | 55 |
maximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value", |
| inputs/NY/Specimen/VegBIEN.csv | ||
|---|---|---|
| 51 | 51 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 52 | 52 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 53 | 53 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 54 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 55 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 56 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 54 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
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|
| 55 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
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|
| 56 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
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|
| 57 | 57 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 58 | 58 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 59 | 59 |
maximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value", |
| inputs/NY/Specimen/test.xml.ref | ||
|---|---|---|
| 382 | 382 |
</plantconcept_id> |
| 383 | 383 |
<determinationdate> |
| 384 | 384 |
<_date> |
| 385 |
<date> |
|
| 386 |
<_dateRangeStart> |
|
| 387 |
<value> |
|
| 388 |
<_date> |
|
| 389 |
<day> |
|
| 390 |
<_nullIf> |
|
| 391 |
<null>0</null> |
|
| 392 |
<type>float</type> |
|
| 393 |
<value>$DayIdentified</value> |
|
| 394 |
</_nullIf> |
|
| 395 |
</day> |
|
| 396 |
<month> |
|
| 397 |
<_nullIf> |
|
| 398 |
<null>0</null> |
|
| 399 |
<type>float</type> |
|
| 400 |
<value>$MonthIdentified</value> |
|
| 401 |
</_nullIf> |
|
| 402 |
</month> |
|
| 403 |
<year> |
|
| 404 |
<_nullIf> |
|
| 405 |
<null>0</null> |
|
| 406 |
<type>float</type> |
|
| 407 |
<value>$YearIdentified</value> |
|
| 408 |
</_nullIf> |
|
| 409 |
</year> |
|
| 410 |
</_date> |
|
| 411 |
</value> |
|
| 412 |
</_dateRangeStart> |
|
| 413 |
</date> |
|
| 385 |
<day> |
|
| 386 |
<_nullIf> |
|
| 387 |
<null>0</null> |
|
| 388 |
<type>float</type> |
|
| 389 |
<value>$DayIdentified</value> |
|
| 390 |
</_nullIf> |
|
| 391 |
</day> |
|
| 392 |
<month> |
|
| 393 |
<_nullIf> |
|
| 394 |
<null>0</null> |
|
| 395 |
<type>float</type> |
|
| 396 |
<value>$MonthIdentified</value> |
|
| 397 |
</_nullIf> |
|
| 398 |
</month> |
|
| 399 |
<year> |
|
| 400 |
<_nullIf> |
|
| 401 |
<null>0</null> |
|
| 402 |
<type>float</type> |
|
| 403 |
<value>$YearIdentified</value> |
|
| 404 |
</_nullIf> |
|
| 405 |
</year> |
|
| 414 | 406 |
</_date> |
| 415 | 407 |
</determinationdate> |
| 416 | 408 |
</taxondetermination> |
| inputs/ACAD/Specimen/VegBIEN.csv | ||
|---|---|---|
| 35 | 35 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 36 | 36 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 37 | 37 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 38 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 38 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/2,
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|
| 39 | 39 |
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 40 | 40 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 41 | 41 |
locality,/location/locationnarrative/_merge/1, |
| inputs/U/Specimen/VegBIEN.csv | ||
|---|---|---|
| 23 | 23 |
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last, |
| 24 | 24 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname", |
| 25 | 25 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname", |
| 26 |
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 26 |
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 27 | 27 |
cf,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 28 | 28 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname/_merge/1, |
| 29 | 29 |
Addcoll,/location/locationevent/taxonoccurrence/verbatimcollectorname/_merge/2, |
| inputs/U/Specimen/test.xml.ref | ||
|---|---|---|
| 204 | 204 |
</plantconcept_id> |
| 205 | 205 |
<determinationdate> |
| 206 | 206 |
<_date> |
| 207 |
<date> |
|
| 208 |
<_dateRangeStart> |
|
| 209 |
<value> |
|
| 210 |
<_date> |
|
| 211 |
<year> |
|
| 212 |
<_nullIf> |
|
| 213 |
<null>0</null> |
|
| 214 |
<type>float</type> |
|
| 215 |
<value>$Detyy</value> |
|
| 216 |
</_nullIf> |
|
| 217 |
</year> |
|
| 218 |
</_date> |
|
| 219 |
</value> |
|
| 220 |
</_dateRangeStart> |
|
| 221 |
</date> |
|
| 207 |
<year> |
|
| 208 |
<_nullIf> |
|
| 209 |
<null>0</null> |
|
| 210 |
<type>float</type> |
|
| 211 |
<value>$Detyy</value> |
|
| 212 |
</_nullIf> |
|
| 213 |
</year> |
|
| 222 | 214 |
</_date> |
| 223 | 215 |
</determinationdate> |
| 224 | 216 |
<taxonfit>$cf</taxonfit> |
| inputs/ARIZ/Specimen/VegBIEN.csv | ||
|---|---|---|
| 59 | 59 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 60 | 60 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 61 | 61 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 62 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 63 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 64 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 62 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 63 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 64 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 65 | 65 |
remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
| 66 | 66 |
IdentificationModifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 67 | 67 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| inputs/ARIZ/Specimen/test.xml.ref | ||
|---|---|---|
| 423 | 423 |
</plantconcept_id> |
| 424 | 424 |
<determinationdate> |
| 425 | 425 |
<_date> |
| 426 |
<date> |
|
| 427 |
<_dateRangeStart> |
|
| 428 |
<value> |
|
| 429 |
<_date> |
|
| 430 |
<day> |
|
| 431 |
<_nullIf> |
|
| 432 |
<null>0</null> |
|
| 433 |
<type>float</type> |
|
| 434 |
<value>$DayIdentified</value> |
|
| 435 |
</_nullIf> |
|
| 436 |
</day> |
|
| 437 |
<month> |
|
| 438 |
<_nullIf> |
|
| 439 |
<null>0</null> |
|
| 440 |
<type>float</type> |
|
| 441 |
<value>$MonthIdentified</value> |
|
| 442 |
</_nullIf> |
|
| 443 |
</month> |
|
| 444 |
<year> |
|
| 445 |
<_nullIf> |
|
| 446 |
<null>0</null> |
|
| 447 |
<type>float</type> |
|
| 448 |
<value>$YearIdentified</value> |
|
| 449 |
</_nullIf> |
|
| 450 |
</year> |
|
| 451 |
</_date> |
|
| 452 |
</value> |
|
| 453 |
</_dateRangeStart> |
|
| 454 |
</date> |
|
| 426 |
<day> |
|
| 427 |
<_nullIf> |
|
| 428 |
<null>0</null> |
|
| 429 |
<type>float</type> |
|
| 430 |
<value>$DayIdentified</value> |
|
| 431 |
</_nullIf> |
|
| 432 |
</day> |
|
| 433 |
<month> |
|
| 434 |
<_nullIf> |
|
| 435 |
<null>0</null> |
|
| 436 |
<type>float</type> |
|
| 437 |
<value>$MonthIdentified</value> |
|
| 438 |
</_nullIf> |
|
| 439 |
</month> |
|
| 440 |
<year> |
|
| 441 |
<_nullIf> |
|
| 442 |
<null>0</null> |
|
| 443 |
<type>float</type> |
|
| 444 |
<value>$YearIdentified</value> |
|
| 445 |
</_nullIf> |
|
| 446 |
</year> |
|
| 455 | 447 |
</_date> |
| 456 | 448 |
</determinationdate> |
| 457 | 449 |
<notes>$Remarks</notes> |
| inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
|---|---|---|
| 87 | 87 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 88 | 88 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 89 | 89 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 90 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 91 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 92 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 93 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
|
|
| 90 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/2,
|
|
| 91 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 92 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 93 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 94 | 94 |
remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
| 95 | 95 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 96 | 96 |
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| inputs/SpeciesLink/Specimen/test.xml.ref | ||
|---|---|---|
| 651 | 651 |
</plantconcept> |
| 652 | 652 |
</plantconcept_id> |
| 653 | 653 |
<determinationdate> |
| 654 |
<_date> |
|
| 655 |
<date> |
|
| 656 |
<_dateRangeStart> |
|
| 657 |
<value> |
|
| 658 |
<_alt> |
|
| 659 |
<1> |
|
| 660 |
<_date> |
|
| 661 |
<day> |
|
| 662 |
<_nullIf> |
|
| 663 |
<null>0</null> |
|
| 664 |
<type>float</type> |
|
| 665 |
<value>$conceptual_darwin_2003_1_0_DayIdentified</value> |
|
| 666 |
</_nullIf> |
|
| 667 |
</day> |
|
| 668 |
<month> |
|
| 669 |
<_nullIf> |
|
| 670 |
<null>0</null> |
|
| 671 |
<type>float</type> |
|
| 672 |
<value>$conceptual_darwin_2003_1_0_MonthIdentified</value> |
|
| 673 |
</_nullIf> |
|
| 674 |
</month> |
|
| 675 |
<year> |
|
| 676 |
<_nullIf> |
|
| 677 |
<null>0</null> |
|
| 678 |
<type>float</type> |
|
| 679 |
<value>$conceptual_darwin_2003_1_0_YearIdentified</value> |
|
| 680 |
</_nullIf> |
|
| 681 |
</year> |
|
| 682 |
</_date> |
|
| 683 |
</1> |
|
| 684 |
<2>$dwc_terms_dateIdentified</2> |
|
| 685 |
</_alt> |
|
| 686 |
</value> |
|
| 687 |
</_dateRangeStart> |
|
| 688 |
</date> |
|
| 689 |
</_date> |
|
| 654 |
<_alt> |
|
| 655 |
<1><_date><date><_dateRangeStart><value>$dwc_terms_dateIdentified</value></_dateRangeStart></date></_date></1> |
|
| 656 |
<2> |
|
| 657 |
<_date> |
|
| 658 |
<day> |
|
| 659 |
<_nullIf> |
|
| 660 |
<null>0</null> |
|
| 661 |
<type>float</type> |
|
| 662 |
<value>$conceptual_darwin_2003_1_0_DayIdentified</value> |
|
| 663 |
</_nullIf> |
|
| 664 |
</day> |
|
| 665 |
<month> |
|
| 666 |
<_nullIf> |
|
| 667 |
<null>0</null> |
|
| 668 |
<type>float</type> |
|
| 669 |
<value>$conceptual_darwin_2003_1_0_MonthIdentified</value> |
|
| 670 |
</_nullIf> |
|
| 671 |
</month> |
|
| 672 |
<year> |
|
| 673 |
<_nullIf> |
|
| 674 |
<null>0</null> |
|
| 675 |
<type>float</type> |
|
| 676 |
<value>$conceptual_darwin_2003_1_0_YearIdentified</value> |
|
| 677 |
</_nullIf> |
|
| 678 |
</year> |
|
| 679 |
</_date> |
|
| 680 |
</2> |
|
| 681 |
</_alt> |
|
| 690 | 682 |
</determinationdate> |
| 691 | 683 |
<notes>$dwc_dwcore_Remarks</notes> |
| 692 | 684 |
</taxondetermination> |
| inputs/VegBank/taxonobservation_/VegBIEN.csv | ||
|---|---|---|
| 17 | 17 |
order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname", |
| 18 | 18 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 19 | 19 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 20 |
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/3, |
|
| 20 |
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/3,
|
|
| 21 | 21 |
taxonFit,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 22 | 22 |
authorplantname,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname", |
| 23 | 23 |
museumaccessionnumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| inputs/QMOR/Specimen/VegBIEN.csv | ||
|---|---|---|
| 45 | 45 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 46 | 46 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 47 | 47 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 48 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/2, |
|
| 48 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/2,
|
|
| 49 | 49 |
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 50 | 50 |
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 51 | 51 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| mappings/VegCore-VegBIEN.csv | ||
|---|---|---|
| 127 | 127 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 128 | 128 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 129 | 129 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 130 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value, |
|
| 130 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value, |
|
| 131 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 132 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 133 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 131 | 134 |
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
| 132 | 135 |
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 133 | 136 |
verbatimScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname", |
| mappings/Veg+-VegBIEN.csv | ||
|---|---|---|
| 205 | 205 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname", |
| 206 | 206 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname", |
| 207 | 207 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname", |
| 208 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt, |
|
| 209 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 210 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 211 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 212 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
|
|
| 213 |
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,
|
|
| 208 |
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt,
|
|
| 209 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/2,
|
|
| 210 |
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value/_alt/3,
|
|
| 211 |
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 212 |
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 213 |
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 214 | 214 |
remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
| 215 | 215 |
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
| 216 | 216 |
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| mappings/for_review/VegCore-VegBIEN.csv | ||
|---|---|---|
| 128 | 128 |
phylum,//plantconcept/plantname_id[rank=subkingdom]/plantname, |
| 129 | 129 |
kingdom,//plantconcept/plantname_id[rank=kingdom]/plantname, |
| 130 | 130 |
dateIdentified,//taxonoccurrence/taxondetermination[]/determinationdate/_*/date, |
| 131 |
dayIdentified,//taxonoccurrence/taxondetermination[]/determinationdate, |
|
| 132 |
monthIdentified,//taxonoccurrence/taxondetermination[]/determinationdate, |
|
| 133 |
yearIdentified,//taxonoccurrence/taxondetermination[]/determinationdate, |
|
| 131 | 134 |
taxonRemarks,//taxonoccurrence/taxondetermination[]/notes, |
| 132 | 135 |
identificationQualifier,//taxonoccurrence/taxondetermination[]/taxonfit, |
| 133 | 136 |
verbatimScientificName,//plantconcept/plantname_id[rank=binomial]/plantname, |
| mappings/for_review/Veg+-VegCore.csv | ||
|---|---|---|
| 8 | 8 |
dateCollected,dateCollected, |
| 9 | 9 |
collectedDate,dateCollected, |
| 10 | 10 |
dateIdentified/_alt,dateIdentified/_alt, |
| 11 |
dayIdentified,dateIdentified, |
|
| 12 |
monthIdentified,dateIdentified, |
|
| 13 |
yearIdentified,dateIdentified, |
|
| 14 | 11 |
dateIdentified,dateIdentified, |
| 15 | 12 |
identifiedDate,dateIdentified, |
| 16 | 13 |
julianDay,day, |
| mappings/Veg+-VegCore.to_self.csv | ||
|---|---|---|
| 8 | 8 |
dateCollected,dateCollected/_alt/2, |
| 9 | 9 |
collectedDate,dateCollected/_alt/3, |
| 10 | 10 |
dateIdentified/_alt,dateIdentified/_alt, |
| 11 |
dayIdentified,"dateIdentified/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 12 |
monthIdentified,"dateIdentified/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 13 |
yearIdentified,"dateIdentified/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 14 | 11 |
dateIdentified,dateIdentified/_alt/2, |
| 15 | 12 |
identifiedDate,dateIdentified/_alt/3, |
| 16 | 13 |
julianDay,day, |
| mappings/VegCore.self.csv | ||
|---|---|---|
| 26 | 26 |
cultivated,cultivated |
| 27 | 27 |
dateCollected,dateCollected |
| 28 | 28 |
dateIdentified,dateIdentified |
| 29 |
dayIdentified,dayIdentified |
|
| 29 | 30 |
decimalLatitude,decimalLatitude |
| 30 | 31 |
decimalLongitude,decimalLongitude |
| 31 | 32 |
diameterBreastHeight,diameterBreastHeight |
| ... | ... | |
| 59 | 60 |
maximumElevationInMeters,maximumElevationInMeters |
| 60 | 61 |
minimumDepthInMeters,minimumDepthInMeters |
| 61 | 62 |
minimumElevationInMeters,minimumElevationInMeters |
| 63 |
monthIdentified,monthIdentified |
|
| 62 | 64 |
nitrogen,nitrogen |
| 63 | 65 |
occurrenceID,occurrenceID |
| 64 | 66 |
order,order |
| ... | ... | |
| 123 | 125 |
verbatimSpecificEpithet,verbatimSpecificEpithet |
| 124 | 126 |
volumeCanopy,volumeCanopy |
| 125 | 127 |
voucherType,voucherType |
| 128 |
yearIdentified,yearIdentified |
|
| mappings/Veg+-VegCore.csv | ||
|---|---|---|
| 8 | 8 |
dateCollected,dateCollected/_alt/2, |
| 9 | 9 |
collectedDate,dateCollected/_alt/3, |
| 10 | 10 |
dateIdentified/_alt,dateIdentified/_alt, |
| 11 |
dayIdentified,"dateIdentified/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 12 |
monthIdentified,"dateIdentified/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 13 |
yearIdentified,"dateIdentified/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 14 | 11 |
dateIdentified,dateIdentified/_alt/2, |
| 15 | 12 |
identifiedDate,dateIdentified/_alt/3, |
| 16 | 13 |
julianDay,day, |
Also available in: Unified diff
mappings/: Moved year/month/dayIdentified mappings from Veg+-VegCore.csv to VegCore-VegBIEN.csv so that Veg+-VegCore.csv contains only renamings, not business logic. Note that this allows the year/month/dayIdentified values to bypass the additional _dateRangeStart filter that is applied to text dates. The priority of the plain dateIdentified field is now higher than the year/month/dayIdentified fields when both are specified, because the dateIdentified field presumably contains verbatim text while the year/month/dayIdentified fields contain parsed date parts.