Revision 4566
Added by Aaron Marcuse-Kubitza about 12 years ago
| mappings/Veg+-VegCore.csv | ||
|---|---|---|
| 2 | 2 |
continentOcean,continent, |
| 3 | 3 |
CountryName,country, |
| 4 | 4 |
dateCollected/_alt,dateCollected/_alt, |
| 5 |
dayCollected,"dateCollected/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 6 |
monthCollected,"dateCollected/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 7 |
yearCollected,"dateCollected/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 8 | 5 |
dateCollected,dateCollected/_alt/2, |
| 9 | 6 |
collectedDate,dateCollected/_alt/3, |
| 10 | 7 |
identifiedDate,dateIdentified, |
| inputs/XAL/Specimen/VegBIEN.csv | ||
|---|---|---|
| 14 | 14 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 15 | 15 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 16 | 16 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 17 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 18 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 19 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 17 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 18 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 19 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 20 | 20 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 21 | 21 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 22 | 22 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
| inputs/NY/Specimen/VegBIEN.csv | ||
|---|---|---|
| 16 | 16 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 17 | 17 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 18 | 18 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 19 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 20 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 21 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 19 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 20 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 21 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 22 | 22 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 23 | 23 |
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/1, |
| 24 | 24 |
PlantFungusDescription,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/2/_label[label=""plant fungus""]/value", |
| inputs/NY/Specimen/test.xml.ref | ||
|---|---|---|
| 163 | 163 |
<aggregateoccurrence> |
| 164 | 164 |
<collectiondate> |
| 165 | 165 |
<_date> |
| 166 |
<date> |
|
| 167 |
<_date> |
|
| 168 |
<day> |
|
| 169 |
<_nullIf> |
|
| 170 |
<null>0</null> |
|
| 171 |
<type>float</type> |
|
| 172 |
<value>$DayCollected</value> |
|
| 173 |
</_nullIf> |
|
| 174 |
</day> |
|
| 175 |
<month> |
|
| 176 |
<_nullIf> |
|
| 177 |
<null>0</null> |
|
| 178 |
<type>float</type> |
|
| 179 |
<value>$MonthCollected</value> |
|
| 180 |
</_nullIf> |
|
| 181 |
</month> |
|
| 182 |
<year> |
|
| 183 |
<_nullIf> |
|
| 184 |
<null>0</null> |
|
| 185 |
<type>float</type> |
|
| 186 |
<value>$YearCollected</value> |
|
| 187 |
</_nullIf> |
|
| 188 |
</year> |
|
| 189 |
</_date> |
|
| 190 |
</date> |
|
| 166 |
<day> |
|
| 167 |
<_nullIf> |
|
| 168 |
<null>0</null> |
|
| 169 |
<type>float</type> |
|
| 170 |
<value>$DayCollected</value> |
|
| 171 |
</_nullIf> |
|
| 172 |
</day> |
|
| 173 |
<month> |
|
| 174 |
<_nullIf> |
|
| 175 |
<null>0</null> |
|
| 176 |
<type>float</type> |
|
| 177 |
<value>$MonthCollected</value> |
|
| 178 |
</_nullIf> |
|
| 179 |
</month> |
|
| 180 |
<year> |
|
| 181 |
<_nullIf> |
|
| 182 |
<null>0</null> |
|
| 183 |
<type>float</type> |
|
| 184 |
<value>$YearCollected</value> |
|
| 185 |
</_nullIf> |
|
| 186 |
</year> |
|
| 191 | 187 |
</_date> |
| 192 | 188 |
</collectiondate> |
| 193 | 189 |
<count>$IndividualCount</count> |
| inputs/UNCC/Specimen/VegBIEN.csv | ||
|---|---|---|
| 4 | 4 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 5 | 5 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 6 | 6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 7 |
collday,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 8 |
collmonth,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 9 |
collyear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 7 |
collday,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 8 |
collmonth,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 9 |
collyear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 10 | 10 |
comment1,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/1, |
| 11 | 11 |
comment2,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/2, |
| 12 | 12 |
comment3,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_merge/3, |
| inputs/UNCC/Specimen/test.xml.ref | ||
|---|---|---|
| 38 | 38 |
<aggregateoccurrence> |
| 39 | 39 |
<collectiondate> |
| 40 | 40 |
<_date> |
| 41 |
<date> |
|
| 42 |
<_date> |
|
| 43 |
<day> |
|
| 44 |
<_nullIf> |
|
| 45 |
<null>0</null> |
|
| 46 |
<type>float</type> |
|
| 47 |
<value>$collday</value> |
|
| 48 |
</_nullIf> |
|
| 49 |
</day> |
|
| 50 |
<month> |
|
| 51 |
<_nullIf> |
|
| 52 |
<null>0</null> |
|
| 53 |
<type>float</type> |
|
| 54 |
<value>$collmonth</value> |
|
| 55 |
</_nullIf> |
|
| 56 |
</month> |
|
| 57 |
<year> |
|
| 58 |
<_nullIf> |
|
| 59 |
<null>0</null> |
|
| 60 |
<type>float</type> |
|
| 61 |
<value>$collyear</value> |
|
| 62 |
</_nullIf> |
|
| 63 |
</year> |
|
| 64 |
</_date> |
|
| 65 |
</date> |
|
| 41 |
<day> |
|
| 42 |
<_nullIf> |
|
| 43 |
<null>0</null> |
|
| 44 |
<type>float</type> |
|
| 45 |
<value>$collday</value> |
|
| 46 |
</_nullIf> |
|
| 47 |
</day> |
|
| 48 |
<month> |
|
| 49 |
<_nullIf> |
|
| 50 |
<null>0</null> |
|
| 51 |
<type>float</type> |
|
| 52 |
<value>$collmonth</value> |
|
| 53 |
</_nullIf> |
|
| 54 |
</month> |
|
| 55 |
<year> |
|
| 56 |
<_nullIf> |
|
| 57 |
<null>0</null> |
|
| 58 |
<type>float</type> |
|
| 59 |
<value>$collyear</value> |
|
| 60 |
</_nullIf> |
|
| 61 |
</year> |
|
| 66 | 62 |
</_date> |
| 67 | 63 |
</collectiondate> |
| 68 | 64 |
<notes> |
| inputs/REMIB/Specimen/VegBIEN.csv | ||
|---|---|---|
| 6 | 6 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 7 | 7 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 8 | 8 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 9 |
coll_day,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 10 |
coll_month,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 11 |
coll_year,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 9 |
coll_day,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 10 |
coll_month,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 11 |
coll_year,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 12 | 12 |
acronym,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
| 13 | 13 |
accession_number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode, |
| 14 | 14 |
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname", |
| inputs/REMIB/Specimen/test.xml.ref | ||
|---|---|---|
| 52 | 52 |
<aggregateoccurrence> |
| 53 | 53 |
<collectiondate> |
| 54 | 54 |
<_date> |
| 55 |
<date> |
|
| 56 |
<_date> |
|
| 57 |
<day> |
|
| 58 |
<_nullIf> |
|
| 59 |
<null>0</null> |
|
| 60 |
<type>float</type> |
|
| 61 |
<value>$coll_day</value> |
|
| 62 |
</_nullIf> |
|
| 63 |
</day> |
|
| 64 |
<month> |
|
| 65 |
<_nullIf> |
|
| 66 |
<null>0</null> |
|
| 67 |
<type>float</type> |
|
| 68 |
<value>$coll_month</value> |
|
| 69 |
</_nullIf> |
|
| 70 |
</month> |
|
| 71 |
<year> |
|
| 72 |
<_nullIf> |
|
| 73 |
<null>0</null> |
|
| 74 |
<type>float</type> |
|
| 75 |
<value>$coll_year</value> |
|
| 76 |
</_nullIf> |
|
| 77 |
</year> |
|
| 78 |
</_date> |
|
| 79 |
</date> |
|
| 55 |
<day> |
|
| 56 |
<_nullIf> |
|
| 57 |
<null>0</null> |
|
| 58 |
<type>float</type> |
|
| 59 |
<value>$coll_day</value> |
|
| 60 |
</_nullIf> |
|
| 61 |
</day> |
|
| 62 |
<month> |
|
| 63 |
<_nullIf> |
|
| 64 |
<null>0</null> |
|
| 65 |
<type>float</type> |
|
| 66 |
<value>$coll_month</value> |
|
| 67 |
</_nullIf> |
|
| 68 |
</month> |
|
| 69 |
<year> |
|
| 70 |
<_nullIf> |
|
| 71 |
<null>0</null> |
|
| 72 |
<type>float</type> |
|
| 73 |
<value>$coll_year</value> |
|
| 74 |
</_nullIf> |
|
| 75 |
</year> |
|
| 80 | 76 |
</_date> |
| 81 | 77 |
</collectiondate> |
| 82 | 78 |
<plantobservation> |
| inputs/FIA/Organism/VegBIEN.csv | ||
|---|---|---|
| 7 | 7 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 8 | 8 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 9 | 9 |
PlotCD,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode", |
| 10 |
MeasDay,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 11 |
MeasMon,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 12 |
MeasYear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 10 |
MeasDay,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 11 |
MeasMon,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 12 |
MeasYear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 13 | 13 |
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter, |
| 14 | 14 |
DBH,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight, |
| 15 | 15 |
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height, |
| inputs/FIA/Organism/test.xml.ref | ||
|---|---|---|
| 41 | 41 |
<aggregateoccurrence> |
| 42 | 42 |
<collectiondate> |
| 43 | 43 |
<_date> |
| 44 |
<date> |
|
| 45 |
<_date> |
|
| 46 |
<day> |
|
| 47 |
<_nullIf> |
|
| 48 |
<null>0</null> |
|
| 49 |
<type>float</type> |
|
| 50 |
<value>$MeasDay</value> |
|
| 51 |
</_nullIf> |
|
| 52 |
</day> |
|
| 53 |
<month> |
|
| 54 |
<_nullIf> |
|
| 55 |
<null>0</null> |
|
| 56 |
<type>float</type> |
|
| 57 |
<value>$MeasMon</value> |
|
| 58 |
</_nullIf> |
|
| 59 |
</month> |
|
| 60 |
<year> |
|
| 61 |
<_nullIf> |
|
| 62 |
<null>0</null> |
|
| 63 |
<type>float</type> |
|
| 64 |
<value>$MeasYear</value> |
|
| 65 |
</_nullIf> |
|
| 66 |
</year> |
|
| 67 |
</_date> |
|
| 68 |
</date> |
|
| 44 |
<day> |
|
| 45 |
<_nullIf> |
|
| 46 |
<null>0</null> |
|
| 47 |
<type>float</type> |
|
| 48 |
<value>$MeasDay</value> |
|
| 49 |
</_nullIf> |
|
| 50 |
</day> |
|
| 51 |
<month> |
|
| 52 |
<_nullIf> |
|
| 53 |
<null>0</null> |
|
| 54 |
<type>float</type> |
|
| 55 |
<value>$MeasMon</value> |
|
| 56 |
</_nullIf> |
|
| 57 |
</month> |
|
| 58 |
<year> |
|
| 59 |
<_nullIf> |
|
| 60 |
<null>0</null> |
|
| 61 |
<type>float</type> |
|
| 62 |
<value>$MeasYear</value> |
|
| 63 |
</_nullIf> |
|
| 64 |
</year> |
|
| 69 | 65 |
</_date> |
| 70 | 66 |
</collectiondate> |
| 71 | 67 |
<plantobservation> |
| inputs/U/Specimen/VegBIEN.csv | ||
|---|---|---|
| 4 | 4 |
Lat,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
| 5 | 5 |
Long,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
| 6 | 6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 7 |
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 8 |
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 9 |
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 7 |
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 8 |
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 9 |
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 10 | 10 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 11 | 11 |
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/2, |
| 12 | 12 |
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
| inputs/U/Specimen/test.xml.ref | ||
|---|---|---|
| 50 | 50 |
<aggregateoccurrence> |
| 51 | 51 |
<collectiondate> |
| 52 | 52 |
<_date> |
| 53 |
<date> |
|
| 54 |
<_date> |
|
| 55 |
<day> |
|
| 56 |
<_nullIf> |
|
| 57 |
<null>0</null> |
|
| 58 |
<type>float</type> |
|
| 59 |
<value>$Colldd</value> |
|
| 60 |
</_nullIf> |
|
| 61 |
</day> |
|
| 62 |
<month> |
|
| 63 |
<_nullIf> |
|
| 64 |
<null>0</null> |
|
| 65 |
<type>float</type> |
|
| 66 |
<value>$Collmm</value> |
|
| 67 |
</_nullIf> |
|
| 68 |
</month> |
|
| 69 |
<year> |
|
| 70 |
<_nullIf> |
|
| 71 |
<null>0</null> |
|
| 72 |
<type>float</type> |
|
| 73 |
<value>$Collyy</value> |
|
| 74 |
</_nullIf> |
|
| 75 |
</year> |
|
| 76 |
</_date> |
|
| 77 |
</date> |
|
| 53 |
<day> |
|
| 54 |
<_nullIf> |
|
| 55 |
<null>0</null> |
|
| 56 |
<type>float</type> |
|
| 57 |
<value>$Colldd</value> |
|
| 58 |
</_nullIf> |
|
| 59 |
</day> |
|
| 60 |
<month> |
|
| 61 |
<_nullIf> |
|
| 62 |
<null>0</null> |
|
| 63 |
<type>float</type> |
|
| 64 |
<value>$Collmm</value> |
|
| 65 |
</_nullIf> |
|
| 66 |
</month> |
|
| 67 |
<year> |
|
| 68 |
<_nullIf> |
|
| 69 |
<null>0</null> |
|
| 70 |
<type>float</type> |
|
| 71 |
<value>$Collyy</value> |
|
| 72 |
</_nullIf> |
|
| 73 |
</year> |
|
| 78 | 74 |
</_date> |
| 79 | 75 |
</collectiondate> |
| 80 | 76 |
<notes>$Notes</notes> |
| inputs/ARIZ/Specimen/VegBIEN.csv | ||
|---|---|---|
| 20 | 20 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 21 | 21 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 22 | 22 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 23 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/0, |
|
| 24 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 25 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 26 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 23 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/0,
|
|
| 24 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 25 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 26 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 27 | 27 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 28 | 28 |
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 29 | 29 |
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
| inputs/ARIZ/Specimen/test.xml.ref | ||
|---|---|---|
| 184 | 184 |
<taxonoccurrence> |
| 185 | 185 |
<aggregateoccurrence> |
| 186 | 186 |
<collectiondate> |
| 187 |
<_date> |
|
| 188 |
<date> |
|
| 189 |
<_alt> |
|
| 190 |
<0>$VerbatimCollectingDate</0> |
|
| 191 |
<1> |
|
| 192 |
<_date> |
|
| 193 |
<day> |
|
| 194 |
<_nullIf> |
|
| 195 |
<null>0</null> |
|
| 196 |
<type>float</type> |
|
| 197 |
<value>$DayCollected</value> |
|
| 198 |
</_nullIf> |
|
| 199 |
</day> |
|
| 200 |
<month> |
|
| 201 |
<_nullIf> |
|
| 202 |
<null>0</null> |
|
| 203 |
<type>float</type> |
|
| 204 |
<value>$MonthCollected</value> |
|
| 205 |
</_nullIf> |
|
| 206 |
</month> |
|
| 207 |
<year> |
|
| 208 |
<_nullIf> |
|
| 209 |
<null>0</null> |
|
| 210 |
<type>float</type> |
|
| 211 |
<value>$YearCollected</value> |
|
| 212 |
</_nullIf> |
|
| 213 |
</year> |
|
| 214 |
</_date> |
|
| 215 |
</1> |
|
| 216 |
</_alt> |
|
| 217 |
</date> |
|
| 218 |
</_date> |
|
| 187 |
<_alt> |
|
| 188 |
<1><_date><date>$VerbatimCollectingDate</date></_date></1> |
|
| 189 |
<2> |
|
| 190 |
<_date> |
|
| 191 |
<day> |
|
| 192 |
<_nullIf> |
|
| 193 |
<null>0</null> |
|
| 194 |
<type>float</type> |
|
| 195 |
<value>$DayCollected</value> |
|
| 196 |
</_nullIf> |
|
| 197 |
</day> |
|
| 198 |
<month> |
|
| 199 |
<_nullIf> |
|
| 200 |
<null>0</null> |
|
| 201 |
<type>float</type> |
|
| 202 |
<value>$MonthCollected</value> |
|
| 203 |
</_nullIf> |
|
| 204 |
</month> |
|
| 205 |
<year> |
|
| 206 |
<_nullIf> |
|
| 207 |
<null>0</null> |
|
| 208 |
<type>float</type> |
|
| 209 |
<value>$YearCollected</value> |
|
| 210 |
</_nullIf> |
|
| 211 |
</year> |
|
| 212 |
</_date> |
|
| 213 |
</2> |
|
| 214 |
</_alt> |
|
| 219 | 215 |
</collectiondate> |
| 220 | 216 |
<count>$IndividualCount</count> |
| 221 | 217 |
<notes>$FieldNotes</notes> |
| inputs/GBIF/Specimen/VegBIEN.csv | ||
|---|---|---|
| 14 | 14 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 15 | 15 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 16 | 16 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 17 |
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2, |
|
| 17 |
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/2,
|
|
| 18 | 18 |
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
| 19 | 19 |
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
| 20 | 20 |
InstitutionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname, |
| inputs/NCU-NCSC/Specimen/VegBIEN.csv | ||
|---|---|---|
| 9 | 9 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename", |
| 10 | 10 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 11 | 11 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 12 |
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/3, |
|
| 12 |
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/3,
|
|
| 13 | 13 |
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
| 14 | 14 |
SeriesName,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
| 15 | 15 |
Accession Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode, |
| inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
|---|---|---|
| 28 | 28 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 29 | 29 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 30 | 30 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 31 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 32 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 33 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 31 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 32 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 33 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 34 | 34 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 35 | 35 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 36 | 36 |
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber/_alt/1, |
| inputs/SpeciesLink/Specimen/test.xml.ref | ||
|---|---|---|
| 278 | 278 |
<aggregateoccurrence> |
| 279 | 279 |
<collectiondate> |
| 280 | 280 |
<_date> |
| 281 |
<date> |
|
| 282 |
<_date> |
|
| 283 |
<day> |
|
| 284 |
<_nullIf> |
|
| 285 |
<null>0</null> |
|
| 286 |
<type>float</type> |
|
| 287 |
<value>$conceptual_darwin_2003_1_0_DayCollected</value> |
|
| 288 |
</_nullIf> |
|
| 289 |
</day> |
|
| 290 |
<month> |
|
| 291 |
<_nullIf> |
|
| 292 |
<null>0</null> |
|
| 293 |
<type>float</type> |
|
| 294 |
<value>$conceptual_darwin_2003_1_0_MonthCollected</value> |
|
| 295 |
</_nullIf> |
|
| 296 |
</month> |
|
| 297 |
<year> |
|
| 298 |
<_nullIf> |
|
| 299 |
<null>0</null> |
|
| 300 |
<type>float</type> |
|
| 301 |
<value>$conceptual_darwin_2003_1_0_YearCollected</value> |
|
| 302 |
</_nullIf> |
|
| 303 |
</year> |
|
| 304 |
</_date> |
|
| 305 |
</date> |
|
| 281 |
<day> |
|
| 282 |
<_nullIf> |
|
| 283 |
<null>0</null> |
|
| 284 |
<type>float</type> |
|
| 285 |
<value>$conceptual_darwin_2003_1_0_DayCollected</value> |
|
| 286 |
</_nullIf> |
|
| 287 |
</day> |
|
| 288 |
<month> |
|
| 289 |
<_nullIf> |
|
| 290 |
<null>0</null> |
|
| 291 |
<type>float</type> |
|
| 292 |
<value>$conceptual_darwin_2003_1_0_MonthCollected</value> |
|
| 293 |
</_nullIf> |
|
| 294 |
</month> |
|
| 295 |
<year> |
|
| 296 |
<_nullIf> |
|
| 297 |
<null>0</null> |
|
| 298 |
<type>float</type> |
|
| 299 |
<value>$conceptual_darwin_2003_1_0_YearCollected</value> |
|
| 300 |
</_nullIf> |
|
| 301 |
</year> |
|
| 306 | 302 |
</_date> |
| 307 | 303 |
</collectiondate> |
| 308 | 304 |
<count> |
| inputs/MO/Specimen/VegBIEN.csv | ||
|---|---|---|
| 13 | 13 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename", |
| 14 | 14 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename", |
| 15 | 15 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename", |
| 16 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 17 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 18 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 16 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 17 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 18 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 19 | 19 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 20 | 20 |
convertednotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 21 | 21 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| inputs/MO/Specimen/test.xml.ref | ||
|---|---|---|
| 141 | 141 |
<aggregateoccurrence> |
| 142 | 142 |
<collectiondate> |
| 143 | 143 |
<_date> |
| 144 |
<date> |
|
| 145 |
<_date> |
|
| 146 |
<day> |
|
| 147 |
<_nullIf> |
|
| 148 |
<null>0</null> |
|
| 149 |
<type>float</type> |
|
| 150 |
<value>$DayCollected</value> |
|
| 151 |
</_nullIf> |
|
| 152 |
</day> |
|
| 153 |
<month> |
|
| 154 |
<_nullIf> |
|
| 155 |
<null>0</null> |
|
| 156 |
<type>float</type> |
|
| 157 |
<value>$MonthCollected</value> |
|
| 158 |
</_nullIf> |
|
| 159 |
</month> |
|
| 160 |
<year> |
|
| 161 |
<_nullIf> |
|
| 162 |
<null>0</null> |
|
| 163 |
<type>float</type> |
|
| 164 |
<value>$YearCollected</value> |
|
| 165 |
</_nullIf> |
|
| 166 |
</year> |
|
| 167 |
</_date> |
|
| 168 |
</date> |
|
| 144 |
<day> |
|
| 145 |
<_nullIf> |
|
| 146 |
<null>0</null> |
|
| 147 |
<type>float</type> |
|
| 148 |
<value>$DayCollected</value> |
|
| 149 |
</_nullIf> |
|
| 150 |
</day> |
|
| 151 |
<month> |
|
| 152 |
<_nullIf> |
|
| 153 |
<null>0</null> |
|
| 154 |
<type>float</type> |
|
| 155 |
<value>$MonthCollected</value> |
|
| 156 |
</_nullIf> |
|
| 157 |
</month> |
|
| 158 |
<year> |
|
| 159 |
<_nullIf> |
|
| 160 |
<null>0</null> |
|
| 161 |
<type>float</type> |
|
| 162 |
<value>$YearCollected</value> |
|
| 163 |
</_nullIf> |
|
| 164 |
</year> |
|
| 169 | 165 |
</_date> |
| 170 | 166 |
</collectiondate> |
| 171 | 167 |
<count>$IndividualCount</count> |
| inputs/VegBank/taxonobservation_/VegBIEN.csv | ||
|---|---|---|
| 3 | 3 |
observation_id,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode", |
| 4 | 4 |
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/1", |
| 5 | 5 |
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode", |
| 6 |
collectiondate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/3, |
|
| 6 |
collectiondate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/3,
|
|
| 7 | 7 |
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes, |
| 8 | 8 |
museumaccessionnumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
| 9 | 9 |
authorplantname,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/1, |
| mappings/VegCore-VegBIEN.csv | ||
|---|---|---|
| 70 | 70 |
silt,/location/locationevent/soilobs/silt, |
| 71 | 71 |
sodium,/location/locationevent/soilobs/sodium, |
| 72 | 72 |
texture,/location/locationevent/soilobs/texture, |
| 73 |
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date, |
|
| 73 |
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date, |
|
| 74 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 75 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 76 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 74 | 77 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 75 | 78 |
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover, |
| 76 | 79 |
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue", |
| mappings/Veg+-VegBIEN.csv | ||
|---|---|---|
| 112 | 112 |
silt,/location/locationevent/soilobs/silt, |
| 113 | 113 |
sodium,/location/locationevent/soilobs/sodium, |
| 114 | 114 |
texture,/location/locationevent/soilobs/texture, |
| 115 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt, |
|
| 116 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 117 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 118 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 119 |
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/2,
|
|
| 120 |
collectedDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_alt/3,
|
|
| 115 |
dateCollected/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt,
|
|
| 116 |
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/2,
|
|
| 117 |
collectedDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/3,
|
|
| 118 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
| 119 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
| 120 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
| 121 | 121 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 122 | 122 |
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover, |
| 123 | 123 |
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue", |
| mappings/for_review/VegCore-VegBIEN.csv | ||
|---|---|---|
| 71 | 71 |
sodium,//soilobs/sodium, |
| 72 | 72 |
texture,//soilobs/texture, |
| 73 | 73 |
dateCollected,//aggregateoccurrence/collectiondate/_*/date, |
| 74 |
dayCollected,//aggregateoccurrence/collectiondate, |
|
| 75 |
monthCollected,//aggregateoccurrence/collectiondate, |
|
| 76 |
yearCollected,//aggregateoccurrence/collectiondate, |
|
| 74 | 77 |
individualCount,//aggregateoccurrence/count, |
| 75 | 78 |
coverPercent,//aggregateoccurrence/cover, |
| 76 | 79 |
censusNumber,"//aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]/definedvalue", |
| mappings/for_review/Veg+-VegCore.csv | ||
|---|---|---|
| 2 | 2 |
continentOcean,continent, |
| 3 | 3 |
CountryName,country, |
| 4 | 4 |
dateCollected/_alt,dateCollected/_alt, |
| 5 |
dayCollected,dateCollected, |
|
| 6 |
monthCollected,dateCollected, |
|
| 7 |
yearCollected,dateCollected, |
|
| 8 | 5 |
dateCollected,dateCollected, |
| 9 | 6 |
collectedDate,dateCollected, |
| 10 | 7 |
identifiedDate,dateIdentified, |
| mappings/Veg+-VegCore.to_self.csv | ||
|---|---|---|
| 2 | 2 |
continentOcean,continent, |
| 3 | 3 |
CountryName,country, |
| 4 | 4 |
dateCollected/_alt,dateCollected/_alt, |
| 5 |
dayCollected,"dateCollected/_alt/1/_date/day/_nullIf:[null=0,type=float]/value", |
|
| 6 |
monthCollected,"dateCollected/_alt/1/_date/month/_nullIf:[null=0,type=float]/value", |
|
| 7 |
yearCollected,"dateCollected/_alt/1/_date/year/_nullIf:[null=0,type=float]/value", |
|
| 8 | 5 |
dateCollected,dateCollected/_alt/2, |
| 9 | 6 |
collectedDate,dateCollected/_alt/3, |
| 10 | 7 |
identifiedDate,dateIdentified, |
Also available in: Unified diff
mappings/: Moved year/month/dayCollected mappings from Veg+-VegCore.csv to VegCore-VegBIEN.csv so that Veg+-VegCore.csv contains only renamings, not business logic. Note that this allows the year/month/dayCollected values to bypass the additional _dateRangeStart filter that is applied to text dates. The priority of the plain dateCollected field is now higher than the year/month/dayCollected fields when both are specified, because the dateCollected field presumably contains verbatim text while the year/month/dayCollected fields contain parsed date parts.