Revision 4620
Added by Aaron Marcuse-Kubitza about 12 years ago
inputs/VegBank/plot_/test.xml.ref | ||
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30 | 30 |
</longitude> |
31 | 31 |
<namedplace_id> |
32 | 32 |
<_simplifyPath> |
33 |
<next>parent_id/namedplace</next> |
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34 |
<require>placename</require> |
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33 |
<next>parent_id</next> |
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35 | 34 |
<path> |
36 | 35 |
<namedplace> |
37 | 36 |
<rank>county</rank> |
mappings/VegCore-VegBIEN.csv | ||
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29 | 29 |
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
30 | 30 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
31 | 31 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
32 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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33 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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34 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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35 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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32 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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33 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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34 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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35 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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36 | 36 |
samplingProtocol,/location/locationevent/*_id/method/name, |
37 | 37 |
projectName,/location/locationevent/*_id/project/projectname, |
38 | 38 |
projectID,/location/locationevent/*_id/project/sourceaccessioncode, |
inputs/GBIF/Specimen/VegBIEN.csv | ||
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11 | 11 |
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
12 | 12 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
13 | 13 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
14 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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15 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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16 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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15 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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17 | 17 |
LatestDateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date, |
18 | 18 |
CatalogNO,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
19 | 19 |
CollectionCD,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
inputs/NCU-NCSC/Specimen/VegBIEN.csv | ||
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6 | 6 |
Accuracy,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1, |
7 | 7 |
Lat (-=S),"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value", |
8 | 8 |
Long (-=W),"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value/_replace:[""\?$""=]/value", |
9 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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10 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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11 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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11 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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12 | 12 |
Collect Date,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date, |
13 | 13 |
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else", |
14 | 14 |
SeriesName,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
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23 | 23 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
24 | 24 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
25 | 25 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
26 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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27 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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29 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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30 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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31 | 31 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
32 | 32 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
33 | 33 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/MO/Specimen/VegBIEN.csv | ||
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9 | 9 |
minimumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value", |
10 | 10 |
latitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
11 | 11 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
12 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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14 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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15 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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12 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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13 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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14 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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15 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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16 | 16 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
17 | 17 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
18 | 18 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/VegBank/plot_/VegBIEN.csv | ||
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11 | 11 |
shape,/location/locationdetermination/footprintgeometry_dwc, |
12 | 12 |
latitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
13 | 13 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
14 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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15 |
region|state|province,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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16 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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17 |
area|country|territory,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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18 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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19 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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15 |
region|state|province,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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16 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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17 |
area|country|territory,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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18 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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19 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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20 | 20 |
authorplotcode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode", |
21 | 21 |
plot_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode", |
22 | 22 |
locationNarrative,/location/locationnarrative/_merge/1, |
inputs/QMOR/Specimen/test.xml.ref | ||
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151 | 151 |
</longitude> |
152 | 152 |
<namedplace_id> |
153 | 153 |
<_simplifyPath> |
154 |
<next>parent_id/namedplace</next> |
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155 |
<require>placename</require> |
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154 |
<next>parent_id</next> |
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156 | 155 |
<path> |
157 | 156 |
<namedplace> |
158 | 157 |
<rank>county</rank> |
inputs/MT/Specimen/VegBIEN.csv | ||
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3 | 3 |
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
4 | 4 |
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
5 | 5 |
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2", |
6 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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6 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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7 | 7 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
8 | 8 |
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
9 | 9 |
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2, |
inputs/MT/Specimen/test.xml.ref | ||
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20 | 20 |
<locationdetermination> |
21 | 21 |
<namedplace_id> |
22 | 22 |
<_simplifyPath> |
23 |
<next>parent_id/namedplace</next> |
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24 |
<require>placename</require> |
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23 |
<next>parent_id</next> |
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25 | 24 |
<path> |
26 | 25 |
<namedplace> |
27 | 26 |
<rank>county</rank> |
inputs/XAL/Specimen/VegBIEN.csv | ||
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10 | 10 |
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2, |
11 | 11 |
latitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
12 | 12 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
13 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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14 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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15 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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16 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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14 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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15 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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16 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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17 | 17 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
18 | 18 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
19 | 19 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/NY/Specimen/VegBIEN.csv | ||
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12 | 12 |
boundingBox,/location/locationdetermination/footprintgeometry_dwc, |
13 | 13 |
latitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
14 | 14 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
15 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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16 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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17 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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18 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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|
15 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
16 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
17 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
18 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
19 | 19 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
20 | 20 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
21 | 21 |
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/NY/Specimen/test.xml.ref | ||
---|---|---|
129 | 129 |
</longitude> |
130 | 130 |
<namedplace_id> |
131 | 131 |
<_simplifyPath> |
132 |
<next>parent_id/namedplace</next> |
|
133 |
<require>placename</require> |
|
132 |
<next>parent_id</next> |
|
134 | 133 |
<path> |
135 | 134 |
<namedplace> |
136 | 135 |
<rank>county</rank> |
inputs/UNCC/Specimen/VegBIEN.csv | ||
---|---|---|
1 | 1 |
UNCC[Veg+],VegBIEN:,Comments |
2 | 2 |
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1", |
3 | 3 |
herbarium,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
4 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
5 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
4 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
5 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
7 | 7 |
collday,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
8 | 8 |
collmonth,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
9 | 9 |
collyear,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/UNCC/Specimen/test.xml.ref | ||
---|---|---|
10 | 10 |
<locationdetermination> |
11 | 11 |
<namedplace_id> |
12 | 12 |
<_simplifyPath> |
13 |
<next>parent_id/namedplace</next> |
|
14 |
<require>placename</require> |
|
13 |
<next>parent_id</next> |
|
15 | 14 |
<path> |
16 | 15 |
<namedplace> |
17 | 16 |
<rank>county</rank> |
inputs/ACAD/Specimen/VegBIEN.csv | ||
---|---|---|
7 | 7 |
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value", |
8 | 8 |
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
9 | 9 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
10 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
11 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
12 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
13 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
10 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
11 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
12 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
13 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
14 | 14 |
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value, |
15 | 15 |
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value, |
16 | 16 |
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber, |
inputs/ACAD/Specimen/test.xml.ref | ||
---|---|---|
41 | 41 |
</longitude> |
42 | 42 |
<namedplace_id> |
43 | 43 |
<_simplifyPath> |
44 |
<next>parent_id/namedplace</next> |
|
45 |
<require>placename</require> |
|
44 |
<next>parent_id</next> |
|
46 | 45 |
<path> |
47 | 46 |
<namedplace> |
48 | 47 |
<rank>county</rank> |
inputs/SALVIAS-CSV/Plot/VegBIEN.csv | ||
---|---|---|
13 | 13 |
elev_min_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value", |
14 | 14 |
lat_decimal,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
15 | 15 |
long_decimal,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
16 |
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
|
|
17 |
pol1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
|
|
18 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
19 |
major_geo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
16 |
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
|
|
17 |
pol1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
|
|
18 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
19 |
major_geo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
20 | 20 |
plot_methodology,/location/locationevent/*_id/method/name, |
21 | 21 |
project,/location/locationevent/*_id/project/projectname, |
22 | 22 |
plot_code,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project) |
inputs/SALVIAS-CSV/Plot/test.xml.ref | ||
---|---|---|
113 | 113 |
</longitude> |
114 | 114 |
<namedplace_id> |
115 | 115 |
<_simplifyPath> |
116 |
<next>parent_id/namedplace</next> |
|
117 |
<require>placename</require> |
|
116 |
<next>parent_id</next> |
|
118 | 117 |
<path> |
119 | 118 |
<namedplace> |
120 | 119 |
<rank>county</rank> |
inputs/CVS/Organism/VegBIEN.csv | ||
---|---|---|
3 | 3 |
locationAccuracy-m,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1, |
4 | 4 |
publicLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
5 | 5 |
publicLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
6 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
7 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
6 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
7 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
8 | 8 |
authorObsCode,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode", |
9 | 9 |
authorObsCode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/2", |
10 | 10 |
authorObsCode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode", |
inputs/CVS/Organism/test.xml.ref | ||
---|---|---|
20 | 20 |
</longitude> |
21 | 21 |
<namedplace_id> |
22 | 22 |
<_simplifyPath> |
23 |
<next>parent_id/namedplace</next> |
|
24 |
<require>placename</require> |
|
23 |
<next>parent_id</next> |
|
25 | 24 |
<path> |
26 | 25 |
<namedplace> |
27 | 26 |
<rank>county</rank> |
inputs/REMIB/Specimen/VegBIEN.csv | ||
---|---|---|
3 | 3 |
acronym,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
4 | 4 |
lat_deg,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
5 | 5 |
long_deg,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
6 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
7 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
8 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
6 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
7 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
8 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
9 | 9 |
coll_day,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
10 | 10 |
coll_month,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
11 | 11 |
coll_year,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/REMIB/Specimen/test.xml.ref | ||
---|---|---|
24 | 24 |
</longitude> |
25 | 25 |
<namedplace_id> |
26 | 26 |
<_simplifyPath> |
27 |
<next>parent_id/namedplace</next> |
|
28 |
<require>placename</require> |
|
27 |
<next>parent_id</next> |
|
29 | 28 |
<path> |
30 | 29 |
<namedplace> |
31 | 30 |
<rank>county</rank> |
inputs/CTFS/Plot/VegBIEN.csv | ||
---|---|---|
9 | 9 |
ShapeOfSite,/location/locationdetermination/footprintgeometry_dwc, |
10 | 10 |
latitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
11 | 11 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
12 |
CountryName,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
12 |
CountryName,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
13 | 13 |
plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode", |
14 | 14 |
plotID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode", |
15 | 15 |
DescriptionOfSite,/location/locationnarrative/_merge/1, |
inputs/CTFS/Plot/test.xml.ref | ||
---|---|---|
28 | 28 |
</longitude> |
29 | 29 |
<namedplace_id> |
30 | 30 |
<_simplifyPath> |
31 |
<next>parent_id/namedplace</next> |
|
32 |
<require>placename</require> |
|
31 |
<next>parent_id</next> |
|
33 | 32 |
<path> |
34 | 33 |
<namedplace> |
35 | 34 |
<rank>county</rank> |
inputs/FIA/Organism/VegBIEN.csv | ||
---|---|---|
4 | 4 |
PlotCD,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode", |
5 | 5 |
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
6 | 6 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
7 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
8 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
7 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
8 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
9 | 9 |
PlotCD,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode", |
10 | 10 |
MeasDay,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
11 | 11 |
MeasMon,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
inputs/FIA/Organism/test.xml.ref | ||
---|---|---|
19 | 19 |
</longitude> |
20 | 20 |
<namedplace_id> |
21 | 21 |
<_simplifyPath> |
22 |
<next>parent_id/namedplace</next> |
|
23 |
<require>placename</require> |
|
22 |
<next>parent_id</next> |
|
24 | 23 |
<path> |
25 | 24 |
<namedplace> |
26 | 25 |
<rank>county</rank> |
inputs/SALVIAS/plotMetadata/VegBIEN.csv | ||
---|---|---|
13 | 13 |
elev_min_m,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value", |
14 | 14 |
LatDec,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
15 | 15 |
LongDec,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
16 |
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
|
|
17 |
PolDiv1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
|
|
18 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
19 |
MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
16 |
pol2,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",Brad: No pol2=countyParish
|
|
17 |
PolDiv1,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",Brad: No; pol1=stateProvince
|
|
18 |
Country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
19 |
MajorGeo,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
20 | 20 |
PlotMethod,/location/locationevent/*_id/method/name, |
21 | 21 |
project_id,/location/locationevent/*_id/project/sourceaccessioncode, |
22 | 22 |
SiteCode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project) |
inputs/SALVIAS/plotMetadata/test.xml.ref | ||
---|---|---|
113 | 113 |
</longitude> |
114 | 114 |
<namedplace_id> |
115 | 115 |
<_simplifyPath> |
116 |
<next>parent_id/namedplace</next> |
|
117 |
<require>placename</require> |
|
116 |
<next>parent_id</next> |
|
118 | 117 |
<path> |
119 | 118 |
<namedplace> |
120 | 119 |
<rank>county</rank> |
inputs/U/Specimen/VegBIEN.csv | ||
---|---|---|
3 | 3 |
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
4 | 4 |
Lat,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value", |
5 | 5 |
Long,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
6 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
7 | 7 |
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
8 | 8 |
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
9 | 9 |
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/U/Specimen/test.xml.ref | ||
---|---|---|
24 | 24 |
</longitude> |
25 | 25 |
<namedplace_id> |
26 | 26 |
<_simplifyPath> |
27 |
<next>parent_id/namedplace</next> |
|
28 |
<require>placename</require> |
|
27 |
<next>parent_id</next> |
|
29 | 28 |
<path> |
30 | 29 |
<namedplace> |
31 | 30 |
<rank>county</rank> |
inputs/ARIZ/Specimen/VegBIEN.csv | ||
---|---|---|
16 | 16 |
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
17 | 17 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
18 | 18 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
19 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
20 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
21 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
22 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
19 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
20 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
21 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
22 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
23 | 23 |
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/0, |
24 | 24 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
25 | 25 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
inputs/ARIZ/Specimen/test.xml.ref | ||
---|---|---|
151 | 151 |
</longitude> |
152 | 152 |
<namedplace_id> |
153 | 153 |
<_simplifyPath> |
154 |
<next>parent_id/namedplace</next> |
|
155 |
<require>placename</require> |
|
154 |
<next>parent_id</next> |
|
156 | 155 |
<path> |
157 | 156 |
<namedplace> |
158 | 157 |
<rank>county</rank> |
inputs/GBIF/Specimen/test.xml.ref | ||
---|---|---|
129 | 129 |
</longitude> |
130 | 130 |
<namedplace_id> |
131 | 131 |
<_simplifyPath> |
132 |
<next>parent_id/namedplace</next> |
|
133 |
<require>placename</require> |
|
132 |
<next>parent_id</next> |
|
134 | 133 |
<path> |
135 | 134 |
<namedplace> |
136 | 135 |
<rank>county</rank> |
inputs/NCU-NCSC/Specimen/test.xml.ref | ||
---|---|---|
46 | 46 |
</longitude> |
47 | 47 |
<namedplace_id> |
48 | 48 |
<_simplifyPath> |
49 |
<next>parent_id/namedplace</next> |
|
50 |
<require>placename</require> |
|
49 |
<next>parent_id</next> |
|
51 | 50 |
<path> |
52 | 51 |
<namedplace> |
53 | 52 |
<rank>county</rank> |
inputs/SpeciesLink/Specimen/test.xml.ref | ||
---|---|---|
220 | 220 |
</longitude> |
221 | 221 |
<namedplace_id> |
222 | 222 |
<_simplifyPath> |
223 |
<next>parent_id/namedplace</next> |
|
224 |
<require>placename</require> |
|
223 |
<next>parent_id</next> |
|
225 | 224 |
<path> |
226 | 225 |
<namedplace> |
227 | 226 |
<rank>county</rank> |
inputs/MO/Specimen/test.xml.ref | ||
---|---|---|
107 | 107 |
</longitude> |
108 | 108 |
<namedplace_id> |
109 | 109 |
<_simplifyPath> |
110 |
<next>parent_id/namedplace</next> |
|
111 |
<require>placename</require> |
|
110 |
<next>parent_id</next> |
|
112 | 111 |
<path> |
113 | 112 |
<namedplace> |
114 | 113 |
<rank>county</rank> |
inputs/QMOR/Specimen/VegBIEN.csv | ||
---|---|---|
16 | 16 |
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value", |
17 | 17 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
18 | 18 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
19 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
20 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
21 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
22 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
19 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
20 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
21 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
22 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
23 | 23 |
samplingProtocol,/location/locationevent/*_id/method/name, |
24 | 24 |
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value, |
25 | 25 |
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value, |
mappings/Veg+-VegBIEN.csv | ||
---|---|---|
50 | 50 |
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value", |
51 | 51 |
longitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
52 | 52 |
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value", |
53 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
54 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
55 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
56 |
CountryName,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
57 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
58 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
59 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
53 |
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
|
|
54 |
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
55 |
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
|
|
56 |
CountryName,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
57 |
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
|
|
58 |
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
59 |
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
|
60 | 60 |
samplingProtocol,/location/locationevent/*_id/method/name, |
61 | 61 |
projectName,/location/locationevent/*_id/project/projectname, |
62 | 62 |
projectID,/location/locationevent/*_id/project/sourceaccessioncode, |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: namedplace elements: _simplifyPath() calls: Removed no longer needed `require` arg, and removed no longer needed table suffix from `next` arg