Revision 4621
Added by Aaron Marcuse-Kubitza almost 12 years ago
| test.xml.ref | ||
|---|---|---|
| 1 | 1 |
Put template: |
| 2 | 2 |
<VegBIEN> |
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<location id="-1"> |
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<sourceaccessioncode>$PlotCD</sourceaccessioncode> |
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<locationdetermination> |
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<latitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DecimalLatitude</value> |
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</_nullIf> |
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</latitude> |
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<longitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DecimalLongitude</value> |
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</_nullIf> |
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</longitude> |
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<namedplace_id> |
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<_simplifyPath> |
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<next>parent_id</next> |
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<path> |
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<namedplace> |
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<rank>county</rank> |
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<placename>$County</placename> |
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<parent_id> |
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<_simplifyPath id="-1"> |
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<next>parent_id</next> |
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<path> |
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<location> |
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<sourceaccessioncode>$PlotCD</sourceaccessioncode> |
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<locationdetermination> |
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<latitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DecimalLatitude</value> |
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</_nullIf> |
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</latitude> |
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<longitude> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$DecimalLongitude</value> |
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</_nullIf> |
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</longitude> |
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<namedplace_id> |
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<_simplifyPath> |
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<next>parent_id</next> |
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| 26 |
<path> |
|
| 28 | 27 |
<namedplace> |
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<rank>stateProvince</rank> |
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<placename>$StateProvince</placename> |
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<rank>county</rank> |
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<placename>$County</placename> |
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<parent_id> |
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<namedplace> |
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<rank>stateProvince</rank> |
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<placename>$StateProvince</placename> |
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</namedplace> |
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</parent_id> |
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| 31 | 36 |
</namedplace> |
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</parent_id> |
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</namedplace> |
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</path> |
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</_simplifyPath> |
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</namedplace_id> |
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</locationdetermination> |
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<locationevent> |
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<collectiondate> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasDay</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasMon</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasYear</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</collectiondate> |
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<plantobservation> |
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<stemobservation> |
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<basaldiameter>$BasalDiameter</basaldiameter> |
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<diameterbreastheight>$DBH</diameterbreastheight> |
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<height>$Height</height> |
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| 71 |
<stemtag> |
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<iscurrent>true</iscurrent> |
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<tag>$TreeTag</tag> |
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</stemtag> |
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</stemobservation> |
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</plantobservation> |
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</aggregateoccurrence> |
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<taxondetermination> |
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<plantconcept_id> |
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<plantconcept> |
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<plantname_id> |
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<_simplifyPath> |
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<next>parent_id</next> |
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<path> |
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<plantname> |
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<rank>binomial</rank> |
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<parent_id> |
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</path> |
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</_simplifyPath> |
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</namedplace_id> |
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</locationdetermination> |
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<locationevent> |
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<collectiondate> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasDay</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasMon</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$MeasYear</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</collectiondate> |
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<plantobservation> |
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<stemobservation> |
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<basaldiameter>$BasalDiameter</basaldiameter> |
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<diameterbreastheight>$DBH</diameterbreastheight> |
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<height>$Height</height> |
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<stemtag> |
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<iscurrent>true</iscurrent> |
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<tag>$TreeTag</tag> |
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</stemtag> |
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</stemobservation> |
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</plantobservation> |
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</aggregateoccurrence> |
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<taxondetermination> |
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<plantconcept_id> |
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<plantconcept> |
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<plantname_id> |
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<_simplifyPath> |
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<next>parent_id</next> |
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<path> |
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| 88 | 88 |
<plantname> |
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<rank>authority</rank>
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|
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<rank>binomial</rank>
|
|
| 90 | 90 |
<parent_id> |
| 91 | 91 |
<plantname> |
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<rank>subspecies</rank>
|
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<rank>authority</rank>
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|
| 93 | 93 |
<parent_id> |
| 94 | 94 |
<plantname> |
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<rank>species</rank> |
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<plantname>$SpecificEpithet</plantname> |
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<rank>subspecies</rank> |
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| 97 | 96 |
<parent_id> |
| 98 | 97 |
<plantname> |
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<rank>genus</rank> |
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| 100 |
<plantname>$Genus</plantname> |
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<rank>species</rank> |
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<plantname>$SpecificEpithet</plantname> |
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<parent_id> |
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<plantname> |
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<rank>genus</rank> |
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<plantname>$Genus</plantname> |
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</plantname> |
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</parent_id> |
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| 101 | 106 |
</plantname> |
| 102 | 107 |
</parent_id> |
| 103 | 108 |
</plantname> |
| ... | ... | |
| 105 | 110 |
</plantname> |
| 106 | 111 |
</parent_id> |
| 107 | 112 |
</plantname> |
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</parent_id>
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</plantname>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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</taxondetermination>
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</taxonoccurrence>
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</locationevent>
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</location>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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</taxondetermination>
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</taxonoccurrence>
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</locationevent>
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</location>
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</path>
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</_simplifyPath>
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| 119 | 124 |
</VegBIEN> |
| 120 | 125 |
Inserted 15 new rows into database |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Added /_simplifyPath:[next=parent_id]/path to root so the returned subplot location will be its parent location if there is no subplot name or ID (indicating that that particular plot did not have subplots). Note that this also causes the parent_id forwarding effect to occur for all other tables containing parent_id, which will help prevent similar issues with subplot events, etc. This will hopefully fix the SALVIAS.plotObservations bug where some organisms did not have a subplot #, causing the subplot location to become NULL and causing the corresponding locationevent rows not to match the locationevent_unique_within_location index filter condition (which requires a parent_id), which caused multiple output table pkeys to be returned for those rows, violating the locationevent_pkeys temp table's primary key.